version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2099 51.39 0 2280125..2280628 - 167 15642126 fliL VC2127 - flagellar basal body-associated protein FliL 2100 53.04 +1 2280663..2282687 - 674 15642127 - VC2128 - flagellar hook-length control protein FliK, putative 2101 46.06 0 2282851..2283345 - 164 15642128 fliJ VC2129 - flagellar biosynthesis chaperone 2102 52.80 +1 2283309..2284628 - 439 15642129 fliI VC2130 - flagellum-specific ATP synthase 2103 52.28 +1 2284632..2285444 - 270 15642130 fliH VC2131 - flagellar assembly protein H 2104 49.09 0 2285525..2286571 - 348 15642131 fliG VC2132 - flagellar motor switch protein G 2105 50.37 0 2286564..2288306 - 580 15642132 fliF VC2133 - flagellar MS-ring protein 2106 45.19 0 2288322..2288633 - 103 161581995 fliE VC2134 - flagellar hook-basal body protein FliE 2107 50.28 0 2288709..2290148 - 479 15642134 - VC2135 - sigma-54 dependent response regulator 2108 50.85 0 2290145..2291200 - 351 15642135 - VC2136 - sensory box sensor histidine kinase 2109 49.90 0 2291312..2292778 - 488 15642136 - VC2137 - sigma-54 dependent transcriptional activator 2110 46.23 0 2293010..2293420 - 136 15642137 fliS VC2138 - flagellar protein FliS 2111 41.90 -1 2293431..2293745 - 104 15642138 - VC2139 - flagellar rod protein FlaI, putative 2112 51.52 0 2293738..2295738 - 666 15642139 fliD VC2140 - flagellar capping protein 2113 48.48 0 2295760..2296221 - 153 15642140 - VC2141 - flagellar protein FlaG 2114 50.40 0 2296295..2297425 - 376 15642141 - VC2142 - flagellin 2115 48.68 0 2297661..2298794 - 377 15642142 - VC2143 - flagellin 2116 49.52 0 2299084..2300220 - 378 15642143 - VC2144 - flagellin 2117 48.84 0 2300344..2301252 - 302 15642144 - VC2145 - tyrA protein 2118 48.39 0 2301318..2301782 - 154 15642145 - VC2146 - hypothetical protein 2119 45.10 0 2301926..2302282 + 118 15642146 - VC2147 - hypothetical protein 2120 49.49 0 2302258..2302356 - 32 15642147 - VC2148 - hypothetical protein 2121 49.31 0 2302349..2302636 - 95 15642148 - VC2149 - hypothetical protein 2122 45.45 0 2302839..2303234 + 131 15642149 - VC2150 - hypothetical protein 2123 41.67 -1 2303200..2303295 - 31 15642150 - VC2151 - hypothetical protein 2124 51.59 0 2303265..2304398 + 377 15642151 - VC2152 - succinyl-diaminopimelate desuccinylase 2125 47.20 0 2304326..2305075 + 249 15642152 - VC2153 - D,D-carboxypeptidase-related protein 2126 45.78 0 2305065..2305289 + 74 15642153 - VC2154 - hypothetical protein 2127 42.71 -1 2305273..2305368 - 31 15642154 - VC2155 - hypothetical protein 2128 49.41 0 2305382..2306401 - 339 15642155 - VC2156 - lipoprotein 2129 48.58 0 2306459..2307337 - 292 15642156 dapA VC2157 - dihydrodipicolinate synthase 2130 42.86 -1 2307501..2307605 + 34 15642157 - VC2158 - hypothetical protein 2131 45.86 0 2307615..2308157 + 180 15642158 - VC2159 - glycine cleavage system transcriptional repressor, putative 2132 45.51 0 2308172..2308639 + 155 15642159 bcp VC2160 - thioredoxin-dependent thiol peroxidase 2133 48.24 0 2308741..2310612 - 623 15642160 - VC2161 - methyl-accepting chemotaxis protein 2134 47.70 0 2310803..2311867 - 354 15642161 - VC2162 - permease PerM, putative 2135 48.52 0 2311860..2312096 - 78 15642162 - VC2163 - hypothetical protein 2136 50.03 0 2312280..2313734 + 484 15642163 - VC2164 - hypothetical protein 2137 47.58 0 2313757..2314107 + 116 15642164 - VC2165 - arsenate reductase 2138 51.87 +1 2314104..2314664 + 186 15642165 - VC2166 - Trp repressor-binding protein 2139 48.86 0 2314667..2315104 + 145 15642166 - VC2167 - hypothetical protein 2140 50.04 0 2315311..2316459 - 382 15642167 - VC2168 - hypothetical protein 2141 45.05 0 2316513..2316623 - 36 15642168 - VC2169 - hypothetical protein 2142 39.64 -1 2316596..2316706 - 36 15642169 - VC2170 - hypothetical protein 2143 52.39 +1 2316680..2317933 + 417 15642170 - VC2171 - uracil permease 2144 47.20 0 2318004..2318486 - 160 15642171 - VC2172 - hypothetical protein 2145 49.55 0 2318504..2318614 - 36 15642172 - VC2173 - hypothetical protein 2146 48.19 0 2318621..2320282 - 553 15642173 ushA VC2174 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 2147 50.47 0 2320824..2321675 - 283 15642174 - VC2175 - 2-dehydro-3-deoxyphosphooctonate aldolase 2148 47.48 0 2321695..2322507 - 270 15642175 - VC2176 - hypothetical protein 2149 46.09 0 2322523..2322906 - 127 15642176 - VC2177 - hypothetical protein 2150 51.92 +1 2322906..2323766 - 286 15642177 - VC2178 - hemK protein 2151 50.32 0 2323770..2324858 - 362 15642178 prfA VC2179 - peptide chain release factor 1 2152 50.08 0 2324888..2326147 - 419 15642179 hemA VC2180 - glutamyl-tRNA reductase 2153 46.23 0 2326288..2326923 + 211 15642180 lolB VC2181 - outer membrane lipoprotein LolB 2154 51.01 0 2326905..2327792 + 295 15642181 - VC2182 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2155 49.84 0 2327823..2328767 + 314 15642182 - VC2183 - ribose-phosphate pyrophosphokinase 2156 48.22 0 2328936..2329526 + 196 15642183 - VC2184 - peptidyl-tRNA hydrolase 2157 48.63 0 2329537..2330628 + 363 161581994 - VC2185 - translation-associated GTPase 2158 43.18 0 2332845..2332976 + 43 15642185 - VC2186 - hypothetical protein 2159 48.32 0 2332968..2334101 - 377 15642186 - VC2187 - flagellin 2160 48.77 0 2334656..2335795 - 379 15642187 - VC2188 - flagellin 2161 41.11 -1 2335944..2336123 - 59 15642188 - VC2189 - hypothetical protein 2162 47.40 0 2336203..2337396 - 397 15642189 flgL VC2190 - flagellar hook-associated protein FlgL 2163 47.95 0 2337409..2339283 - 624 15642190 flgK VC2191 - flagellar hook-associated protein FlgK 2164 48.78 0 2339463..2340401 - 312 15642191 flgJ VC2192 - peptidoglycan hydrolase 2165 50.46 0 2340412..2341497 - 361 15642192 flgI VC2193 - flagellar basal body P-ring protein 2166 49.11 0 2341588..2342373 - 261 15642193 flgH VC2194 - flagellar basal body L-ring protein 2167 48.92 0 2342388..2343176 - 262 15642194 flgG VC2195 - flagellar basal body rod protein FlgG 2168 51.60 0 2343196..2343945 - 249 15642195 flgF VC2196 - flagellar basal body rod protein FlgF 2169 47.43 0 2344128..2345432 - 434 15642196 flgE VC2197 - flagellar hook protein FlgE 2170 48.16 0 2345461..2346168 - 235 15642197 flgD VC2198 - flagellar basal body rod modification protein 2171 46.28 0 2346186..2346602 - 138 15642198 flgC VC2199 - flagellar basal body rod protein FlgC 2172 48.99 0 2346607..2347002 - 131 15642199 flgB VC2200 - flagellar basal body rod protein FlgB 2173 46.38 0 2347222..2348049 - 275 15642200 - VC2201 - chemotaxis protein methyltransferase CheR 2174 44.01 0 2348060..2348986 - 308 15642201 - VC2202 - chemotaxis protein CheV 2175 45.70 0 2349043..2349810 + 255 15642202 flgA VC2203 - flagellar basal body P-ring biosynthesis protein FlgA 2176 49.07 0 2349941..2350264 + 107 15642203 - VC2204 - negative regulator of flagellin synthesis FlgM, putative 2177 44.91 0 2350362..2350793 + 143 15642204 - VC2205 - hypothetical protein 2178 50.00 0 2350903..2351340 - 145 15642205 - VC2206 - hypothetical protein 2179 47.98 0 2351348..2352016 - 222 15642206 - VC2207 - hypothetical protein 2180 47.62 0 2352144..2353277 + 377 15642207 - VC2208 - hypothetical protein 2181 49.58 0 2353407..2360647 - 2413 15642774 vibF VC2209 - nonribosomal peptide synthetase VibF 2182 45.83 0 2360905..2361720 - 271 15642208 - VC2210 - vibriobactin utilization protein ViuB 2183 46.27 0 2362024..2364087 - 687 15642209 - VC2211 - ferric vibriobactin receptor 2184 43.35 0 2364507..2365205 + 232 15642210 - VC2212 - hypothetical protein 2185 47.72 0 2365293..2366258 - 321 15642211 - VC2213 - outer membrane protein OmpA 2186 48.50 0 2366554..2368083 - 509 15642212 gltX VC2214 - glutamyl-tRNA synthetase 2187 51.02 0 2368152..2370899 + 915 15642213 - VC2215 - cation transporter E1-E2 family ATPase 2188 46.80 0 2370896..2371348 + 150 15642214 - VC2216 - hypothetical protein 2189 49.55 0 2371485..2374136 - 883 15642215 - VC2217 - beta-N-acetylhexosaminidase 2190 42.11 -1 2374169..2374282 + 37 15642216 - VC2218 - hypothetical protein 2191 45.30 0 2374364..2374480 - 38 15642217 - VC2219 - hypothetical protein 2192 47.27 0 2374553..2375449 + 298 15642218 - VC2220 - hypothetical protein 2193 43.26 0 2375930..2376070 + 46 15642219 - VC2221 - hypothetical protein 2194 49.57 0 2376252..2376830 + 192 15642220 - VC2222 - hypothetical protein 2195 47.41 0 2376860..2377882 + 340 15642221 - VC2223 - pseudouridine synthase family 1 protein 2196 45.16 0 2377980..2379518 - 512 15642222 - VC2224 - GGDEF family protein 2197 46.41 0 2379749..2380375 - 208 15642223 upp VC2225 - uracil phosphoribosyltransferase 2198 50.14 0 2380542..2381582 + 346 15642224 - VC2226 - phosphoribosylaminoimidazole synthetase 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0