version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2050 46.90 0 2233741..2236017 - 758 15642077 - VC2077 - ferrous iron transport protein B 2051 47.62 0 2236014..2236244 - 76 15642078 - VC2078 - ferrous iron transport protein A 2052 38.89 -2 2236868..2236975 + 35 15642079 - VC2079 - hypothetical protein 2053 44.12 0 2237016..2240381 - 1121 15642080 - VC2080 - AraC/XylS family transcriptional regulator 2054 46.98 0 2240563..2241456 - 297 15642081 - VC2081 - zinc ABC transporter, periplasmic zinc-binding protein 2055 46.26 0 2241531..2242319 + 262 15642082 - VC2082 - zinc ABC transporter, ATP-binding protein 2056 49.81 0 2242312..2243094 + 260 15642083 - VC2083 - zinc ABC transporter, permease protein 2057 48.57 0 2243201..2244073 - 290 15642084 - VC2084 - succinyl-CoA synthetase subunit alpha 2058 47.47 0 2244073..2245239 - 388 15642085 sucC VC2085 - succinyl-CoA synthetase subunit beta 2059 49.22 0 2245407..2246621 - 404 15642086 - VC2086 - dihydrolipoamide acetyltransferase 2060 50.23 0 2246650..2249460 - 936 15642087 kgd VC2087 - alpha-ketoglutarate decarboxylase 2061 44.30 0 2249549..2250259 - 236 15642088 sdhB VC2088 - succinate dehydrogenase iron-sulfur subunit 2062 49.41 0 2250274..2252040 - 588 15642089 sdhA VC2089 - succinate dehydrogenase flavoprotein subunit 2063 43.48 0 2252041..2252385 - 114 15642090 - VC2090 - succinate dehydrogenase, hydrophobic membrane anchor protein 2064 48.09 0 2252379..2252771 - 130 15642091 sdhC VC2091 - succinate dehydrogenase cytochrome b556 large membrane subunit 2065 46.84 0 2253161..2254456 + 431 15642092 gltA VC2092 - type II citrate synthase 2066 45.65 0 2254508..2255278 - 256 15642093 - VC2093 - hypothetical protein 2067 44.06 0 2255331..2256104 + 257 15642094 - VC2094 - hypothetical protein 2068 48.82 0 2256154..2257800 - 548 15642095 - VC2095 - phosphoglucomutase 2069 46.63 0 2257909..2258442 - 177 15642096 - VC2096 - replication initiation regulator SeqA 2070 47.67 0 2258535..2259308 + 257 15642097 - VC2097 - esterase/lipase YbfF, putative 2071 45.50 0 2259404..2259625 + 73 15642098 - VC2098 - hypothetical protein 2072 46.40 0 2259674..2260201 + 175 15642099 - VC2099 - flavodoxin FldA 2073 50.29 0 2260275..2260964 - 229 15642100 - VC2100 - hypothetical protein 2074 48.07 0 2260970..2261410 - 146 15642101 - VC2101 - hypothetical protein 2075 36.96 -2 2261373..2261510 - 45 15642102 - VC2102 - hypothetical protein 2076 50.51 0 2261526..2262404 + 292 15642103 - VC2103 - LysR family transcriptional regulator 2077 47.62 0 2262408..2262617 - 69 15642104 - VC2104 - hypothetical protein 2078 47.20 0 2262535..2262909 - 124 15642105 - VC2105 - hypothetical protein 2079 43.93 0 2263275..2263727 + 150 15642106 fur VC2106 - ferric uptake regulator 2080 49.36 0 2263809..2264825 - 338 15642107 - VC2107 - aspartate-semialdehyde dehydrogenase 2081 49.91 0 2264806..2265969 - 387 15642108 - VC2108 - erythronate-4-phosphate dehydrogenase 2082 51.56 0 2267483..2269507 + 674 15642109 mnmC VC2110 - 5-methylaminomethyl-2-thiouridine methyltransferase 2083 50.57 0 2269586..2270113 - 175 15642110 - VC2111 - hypothetical protein 2084 51.89 +1 2270321..2270584 - 87 15642111 - VC2112 - hypothetical protein 2085 47.65 0 2270623..2271153 - 176 15642112 - VC2113 - hypothetical protein 2086 43.59 0 2271344..2271460 - 38 15642113 - VC2114 - hypothetical protein 2087 52.24 +1 2271517..2272140 + 207 15642114 - VC2115 - hypothetical protein 2088 51.01 0 2272222..2273307 - 361 15642115 - VC2116 - chorismate synthase 2089 46.67 0 2273405..2273629 + 74 15642116 - VC2117 - hypothetical protein 2090 49.31 0 2273537..2274481 - 314 15642117 - VC2118 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2091 50.09 0 2274536..2275096 + 186 15642118 - VC2119 - hypothetical protein 2092 50.49 0 2275104..2276234 - 376 15642119 flhB VC2120 - flagellar biosynthesis protein FlhB 2093 49.81 0 2276244..2277026 - 260 15642120 fliR VC2121 - flagellar biosynthesis protein FliR 2094 45.19 0 2277035..2277304 - 89 15642121 fliQ VC2122 - flagellar biosynthesis protein FliQ 2095 47.89 0 2277317..2278216 - 299 15642122 fliP VC2123 - flagellar biosynthesis protein FliP 2096 50.51 0 2278194..2278583 - 129 15642123 - VC2124 - flagellar protein FliO 2097 50.60 0 2278587..2279003 - 138 15642124 fliN VC2125 - flagellar motor switch protein 2098 49.05 0 2279068..2280117 - 349 15642125 fliM VC2126 - flagellar motor switch protein FliM 2099 51.39 0 2280125..2280628 - 167 15642126 fliL VC2127 - flagellar basal body-associated protein FliL 2100 53.04 +1 2280663..2282687 - 674 15642127 - VC2128 - flagellar hook-length control protein FliK, putative 2101 46.06 0 2282851..2283345 - 164 15642128 fliJ VC2129 - flagellar biosynthesis chaperone 2102 52.80 +1 2283309..2284628 - 439 15642129 fliI VC2130 - flagellum-specific ATP synthase 2103 52.28 +1 2284632..2285444 - 270 15642130 fliH VC2131 - flagellar assembly protein H 2104 49.09 0 2285525..2286571 - 348 15642131 fliG VC2132 - flagellar motor switch protein G 2105 50.37 0 2286564..2288306 - 580 15642132 fliF VC2133 - flagellar MS-ring protein 2106 45.19 0 2288322..2288633 - 103 161581995 fliE VC2134 - flagellar hook-basal body protein FliE 2107 50.28 0 2288709..2290148 - 479 15642134 - VC2135 - sigma-54 dependent response regulator 2108 50.85 0 2290145..2291200 - 351 15642135 - VC2136 - sensory box sensor histidine kinase 2109 49.90 0 2291312..2292778 - 488 15642136 - VC2137 - sigma-54 dependent transcriptional activator 2110 46.23 0 2293010..2293420 - 136 15642137 fliS VC2138 - flagellar protein FliS 2111 41.90 -1 2293431..2293745 - 104 15642138 - VC2139 - flagellar rod protein FlaI, putative 2112 51.52 0 2293738..2295738 - 666 15642139 fliD VC2140 - flagellar capping protein 2113 48.48 0 2295760..2296221 - 153 15642140 - VC2141 - flagellar protein FlaG 2114 50.40 0 2296295..2297425 - 376 15642141 - VC2142 - flagellin 2115 48.68 0 2297661..2298794 - 377 15642142 - VC2143 - flagellin 2116 49.52 0 2299084..2300220 - 378 15642143 - VC2144 - flagellin 2117 48.84 0 2300344..2301252 - 302 15642144 - VC2145 - tyrA protein 2118 48.39 0 2301318..2301782 - 154 15642145 - VC2146 - hypothetical protein 2119 45.10 0 2301926..2302282 + 118 15642146 - VC2147 - hypothetical protein 2120 49.49 0 2302258..2302356 - 32 15642147 - VC2148 - hypothetical protein 2121 49.31 0 2302349..2302636 - 95 15642148 - VC2149 - hypothetical protein 2122 45.45 0 2302839..2303234 + 131 15642149 - VC2150 - hypothetical protein 2123 41.67 -1 2303200..2303295 - 31 15642150 - VC2151 - hypothetical protein 2124 51.59 0 2303265..2304398 + 377 15642151 - VC2152 - succinyl-diaminopimelate desuccinylase 2125 47.20 0 2304326..2305075 + 249 15642152 - VC2153 - D,D-carboxypeptidase-related protein 2126 45.78 0 2305065..2305289 + 74 15642153 - VC2154 - hypothetical protein 2127 42.71 -1 2305273..2305368 - 31 15642154 - VC2155 - hypothetical protein 2128 49.41 0 2305382..2306401 - 339 15642155 - VC2156 - lipoprotein 2129 48.58 0 2306459..2307337 - 292 15642156 dapA VC2157 - dihydrodipicolinate synthase 2130 42.86 -1 2307501..2307605 + 34 15642157 - VC2158 - hypothetical protein 2131 45.86 0 2307615..2308157 + 180 15642158 - VC2159 - glycine cleavage system transcriptional repressor, putative 2132 45.51 0 2308172..2308639 + 155 15642159 bcp VC2160 - thioredoxin-dependent thiol peroxidase 2133 48.24 0 2308741..2310612 - 623 15642160 - VC2161 - methyl-accepting chemotaxis protein 2134 47.70 0 2310803..2311867 - 354 15642161 - VC2162 - permease PerM, putative 2135 48.52 0 2311860..2312096 - 78 15642162 - VC2163 - hypothetical protein 2136 50.03 0 2312280..2313734 + 484 15642163 - VC2164 - hypothetical protein 2137 47.58 0 2313757..2314107 + 116 15642164 - VC2165 - arsenate reductase 2138 51.87 +1 2314104..2314664 + 186 15642165 - VC2166 - Trp repressor-binding protein 2139 48.86 0 2314667..2315104 + 145 15642166 - VC2167 - hypothetical protein 2140 50.04 0 2315311..2316459 - 382 15642167 - VC2168 - hypothetical protein 2141 45.05 0 2316513..2316623 - 36 15642168 - VC2169 - hypothetical protein 2142 39.64 -1 2316596..2316706 - 36 15642169 - VC2170 - hypothetical protein 2143 52.39 +1 2316680..2317933 + 417 15642170 - VC2171 - uracil permease 2144 47.20 0 2318004..2318486 - 160 15642171 - VC2172 - hypothetical protein 2145 49.55 0 2318504..2318614 - 36 15642172 - VC2173 - hypothetical protein 2146 48.19 0 2318621..2320282 - 553 15642173 ushA VC2174 - bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor 2147 50.47 0 2320824..2321675 - 283 15642174 - VC2175 - 2-dehydro-3-deoxyphosphooctonate aldolase 2148 47.48 0 2321695..2322507 - 270 15642175 - VC2176 - hypothetical protein 2149 46.09 0 2322523..2322906 - 127 15642176 - VC2177 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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