version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1745 43.87 0 1913628..1916009 - 793 15641772 - VC1769 - DNA methylase HsdM, putative 1746 41.72 -1 1916150..1918213 - 687 15641773 - VC1770 - hypothetical protein 1747 41.85 -1 1918195..1921857 - 1220 15641774 - VC1771 - hypothetical protein 1748 44.83 0 1921885..1922745 + 286 15641775 - VC1772 - hypothetical protein 1749 36.13 -2 1922810..1923880 - 356 15641776 - VC1773 - hypothetical protein 1750 41.65 -1 1923895..1925049 - 384 15641777 - VC1774 - hypothetical protein 1751 43.61 0 1925231..1926067 - 278 15641778 - VC1775 - hypothetical protein 1752 43.14 -1 1926196..1927092 - 298 15641779 - VC1776 - N-acetylneuraminate lyase, putative 1753 45.33 0 1927130..1928413 - 427 15641780 - VC1777 - hypothetical protein 1754 41.19 -1 1928421..1928942 - 173 15641781 - VC1778 - hypothetical protein 1755 44.62 0 1928993..1929958 - 321 15641782 - VC1779 - C4-dicarboxylate-binding periplasmic protein 1756 34.01 -2 1929989..1930282 + 97 15641783 - VC1780 - hypothetical protein 1757 47.16 0 1930173..1930895 + 240 15641784 - VC1781 - N-acetylmannosamine-6-phosphate 2-epimerase 1758 45.02 0 1930883..1931746 + 287 15641785 - VC1782 - N-acetylmannosamine kinase 1759 44.94 0 1931750..1932886 + 378 15641786 - VC1783 - N-acetylglucosamine-6-phosphate deacetylase 1760 45.17 0 1933231..1935654 + 807 15641787 - VC1784 - neuraminidase 1761 44.44 0 1935801..1936007 - 68 15641788 - VC1785 - transcriptional regulator 1762 48.85 0 1936121..1936597 + 158 15641789 - VC1786 - DNA repair protein RadC, putative 1763 45.65 0 1936594..1936731 + 45 15641790 - VC1787 - hypothetical protein 1764 43.10 -1 1936827..1937522 - 231 15641791 - VC1788 - hypothetical protein 1765 44.44 0 1937519..1938391 - 290 15641792 - VC1789 - transposase OrfAB, subunit B 1766 43.19 0 1938388..1938732 - 114 15641793 - VC1790 - transposase OrfAB, subunit A 1767 44.00 0 1938739..1939779 - 346 15641794 - VC1791 - hypothetical protein 1768 42.78 -1 1939914..1940273 - 119 15641795 - VC1792 - hypothetical protein 1769 39.15 -1 1940322..1940699 - 125 15641796 - VC1793 - hypothetical protein 1770 37.82 -2 1940754..1941332 - 192 15641797 - VC1794 - hypothetical protein 1771 38.94 -1 1941351..1941671 - 106 15641798 - VC1795 - transcriptional regulator, putative 1772 39.73 -1 1941658..1942032 - 124 15641799 - VC1796 - middle operon regulator-related protein 1773 40.04 -1 1942842..1943303 - 153 15641800 - VC1797 - hypothetical protein 1774 44.53 0 1943306..1944457 - 383 15641801 - VC1798 - eha protein 1775 47.72 0 1944387..1946144 - 585 15641802 - VC1799 - hypothetical protein 1776 44.24 0 1946151..1947122 - 323 15641803 - VC1800 - hypothetical protein 1777 34.71 -2 1947461..1947823 - 120 15641804 - VC1801 - hypothetical protein 1778 38.82 -2 1947786..1948022 - 78 15641805 - VC1802 - hypothetical protein 1779 40.48 -1 1948112..1948573 + 153 15641806 - VC1803 - hypothetical protein 1780 48.25 0 1948800..1949114 + 104 15641807 - VC1804 - hypothetical protein 1781 45.41 0 1949165..1949611 + 148 15641808 - VC1805 - hypothetical protein 1782 43.36 0 1949718..1950704 + 328 15641809 - VC1806 - hypothetical protein 1783 29.20 -2 1951671..1952516 + 281 15641810 - VC1808 - hypothetical protein 1784 47.19 0 1952631..1952861 - 76 15641811 - VC1809 - transcriptional regulator, putative 1785 43.63 0 1953461..1953664 + 67 15641812 - VC1810 - hypothetical protein 1786 47.05 0 1953656..1954129 - 157 15641813 - VC1811 - hypothetical protein 1787 45.95 0 1954253..1954672 - 139 15641814 - VC1812 - hypothetical protein 1788 41.94 -1 1954641..1954733 - 30 15641815 - VC1813 - hypothetical protein 1789 50.58 0 1954789..1956174 + 461 15641816 - VC1814 - deoxyribodipyrimidine photolyase 1790 52.82 +1 1956171..1956878 + 235 15641817 - VC1815 - C factor cell-cell signaling protein 1791 45.37 0 1956889..1957104 - 71 15641818 - VC1816 - hypothetical protein 1792 50.40 0 1957201..1958964 - 587 15641819 - VC1817 - sigma-54 dependent transcriptional regulator 1793 45.10 0 1959132..1959233 - 33 15641820 - VC1818 - hypothetical protein 1794 49.57 0 1959245..1960765 + 506 15641821 - VC1819 - aldehyde dehydrogenase 1795 37.41 -2 1961098..1961538 + 146 15641822 - VC1820 - PTS system, fructose-specific IIA component 1796 49.79 0 1961550..1962953 + 467 15641823 - VC1821 - PTS system, fructose-specific IIBC component 1797 49.52 0 1963028..1964893 - 621 15641824 - VC1822 - PTS system, fructose-specific IIABC component 1798 49.33 0 1965110..1965409 + 99 15641825 - VC1823 - PTS system, fructose-specific IIB component 1799 47.69 0 1965418..1966197 + 259 15641826 - VC1824 - PTS system, nitrogen regulatory IIA component, putative 1800 42.74 -1 1966189..1967028 - 279 15641827 - VC1825 - transcriptional regulator 1801 50.37 0 1967400..1969301 + 633 15641828 - VC1826 - PTS system, fructose-specific IIABC component 1802 46.10 0 1969417..1970583 + 388 15641829 - VC1827 - mannose-6-phosphate isomerase 1803 46.58 0 1970703..1971155 - 150 15641830 - VC1828 - hypothetical protein 1804 42.59 -1 1971344..1971451 - 35 15641831 - VC1829 - hypothetical protein 1805 44.79 0 1971429..1971524 + 31 15641832 - VC1830 - hypothetical protein 1806 45.05 0 1971491..1973701 - 736 15641833 - VC1831 - sensor histidine kinase 1807 45.03 0 1973909..1974481 + 190 15641834 - VC1832 - hypothetical protein 1808 46.70 0 1974555..1975616 - 353 15641835 - VC1833 - quinolinate synthetase 1809 46.80 0 1975790..1976554 - 254 15641836 - VC1834 - hypothetical protein 1810 47.40 0 1976570..1977088 - 172 15641837 - VC1835 - peptidoglycan-associated lipoprotein 1811 45.38 0 1977120..1978472 - 450 15641838 tolB VC1836 - translocation protein TolB 1812 47.15 0 1978487..1979557 - 356 15641839 - VC1837 - tolA protein 1813 43.08 -1 1979575..1980015 - 146 15641840 - VC1838 - tolR membrane protein 1814 46.20 0 1980018..1980701 - 227 15641841 - VC1839 - tolQ protein 1815 43.38 0 1980691..1981158 - 155 15641842 - VC1840 - hypothetical protein 1816 47.80 0 1981267..1981584 - 105 15641843 - VC1841 - hypothetical protein 1817 44.44 0 1981577..1981684 - 35 15641844 - VC1842 - hypothetical protein 1818 47.05 0 1981697..1982833 - 378 15641845 - VC1843 - cytochrome d ubiquinol oxidase, subunit II 1819 47.05 0 1982851..1984476 - 541 15641846 - VC1844 - cytochrome d ubiquinol oxidase, subunit I 1820 47.16 0 1984896..1985900 - 334 15641847 ruvB VC1845 - Holliday junction DNA helicase B 1821 48.29 0 1985956..1986570 - 204 15641848 ruvA VC1846 - Holliday junction DNA helicase motor protein 1822 49.62 0 1986667..1987188 - 173 15641849 ruvC VC1847 - Holliday junction resolvase 1823 46.59 0 1987276..1988655 - 459 15641850 cysS VC1848 - cysteinyl-tRNA synthetase 1824 46.06 0 1988801..1989295 + 164 15641851 - VC1849 - peptidyl-prolyl cis-trans isomerase B 1825 43.76 0 1989336..1990064 + 242 15641852 - VC1850 - UDP-2,3-diacylglucosamine hydrolase 1826 43.62 0 1990171..1991385 + 404 15641853 - VC1851 - hypothetical protein 1827 43.42 0 1991447..1991902 + 151 15641854 - VC1852 - hypothetical protein 1828 37.04 -2 1991934..1992608 - 224 15641855 - VC1853 - hypothetical protein 1829 41.92 -1 1992727..1993833 - 368 15641856 - VC1854 - porin, putative 1830 46.48 0 1994271..1996346 + 691 161582001 dinG VC1855 - ATP-dependent DNA helicase DinG 1831 50.00 0 1996384..1997163 + 259 15641858 - VC1856 - hypothetical protein 1832 46.63 0 1997148..1997711 + 187 15641859 - VC1857 - primosomal replication protein N`` 1833 47.89 0 1997712..1997924 + 70 15641860 - VC1858 - hypothetical protein 1834 47.71 0 1997948..2000068 - 706 15641861 - VC1859 - methyl-accepting chemotaxis protein 1835 46.10 0 2000266..2001072 + 268 15641862 - VC1860 - exonuclease III 1836 46.61 0 2001131..2001808 - 225 15641863 - VC1861 - amino acid ABC transporter, permease protein 1837 48.53 0 2001811..2002593 - 260 15641864 - VC1862 - amino acid ABC transporter, permease protein 1838 46.62 0 2002699..2003481 - 260 15641865 - VC1863 - amino acid ABC transporter, periplasmic amino acid-binding protein 1839 47.08 0 2003660..2004430 - 256 15641866 - VC1864 - amino acid ABC transporter, ATP-binding protein 1840 49.94 0 2005135..2006688 + 517 15641867 - VC1865 - hypothetical protein 1841 47.93 0 2006867..2009230 + 787 15641868 - VC1866 - formate acetyltransferase 1842 48.01 0 2009366..2010394 + 342 15641869 - VC1867 - hypothetical protein 1843 47.26 0 2010412..2012292 - 626 15641870 - VC1868 - methyl-accepting chemotaxis protein 1844 46.15 0 2012625..2013365 + 246 15641871 pflA VC1869 - pyruvate formate lyase-activating enzyme 1 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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