version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 122 48.82 0 116053..118584 + 843 15640154 cyaA VC0122 - adenylate cyclase 123 48.57 0 118690..119004 - 104 15640155 cyaY VC0123 - frataxin-like protein 124 50.40 0 119229..120482 + 417 15640156 - VC0125 - diaminopimelate decarboxylase 125 52.23 +1 120494..121324 + 276 161582035 dapF VC0126 - diaminopimelate epimerase 126 52.50 +1 121338..122036 + 232 15640158 - VC0127 - hypothetical protein 127 51.82 +1 122005..122940 + 311 15640159 xerC VC0128 - site-specific tyrosine recombinase XerC 128 52.08 +1 122943..123662 + 239 15640160 - VC0129 - hypothetical protein 129 52.09 +1 123772..126261 + 829 15640161 - VC0130 - GGDEF family protein 130 54.77 +1 126294..126890 - 198 15640162 - VC0131 - hypothetical protein 131 52.43 +1 126887..128431 - 514 15640163 - VC0132 - hypothetical protein 132 47.09 0 128444..128632 + 62 15640164 - VC0133 - hypothetical protein 133 47.95 0 128715..129542 - 275 15640165 - VC0134 - hypothetical protein 134 47.00 0 129657..130673 - 338 15640166 - VC0135 - lysophospholipase L2 135 47.90 0 130748..131365 + 205 15640167 rhtB VC0136 - homoserine/homoserine lactone efflux protein 136 48.73 0 131313..132611 + 432 15640168 - VC0137 - hypothetical protein 137 54.17 +1 132619..132738 - 39 15640169 - VC0138 - hypothetical protein 138 46.50 0 132791..133261 - 156 15640170 - VC0139 - DPS family protein 139 45.45 0 133431..133760 - 109 15640171 - VC0140 - hypothetical protein 140 40.95 -1 133799..133903 + 34 15640172 - VC0141 - hypothetical protein 141 43.09 -1 133965..134333 + 122 15640173 - VC0142 - hypothetical protein 142 25.58 -2 134836..135093 + 85 15640174 - VC0143 - hypothetical protein 143 48.57 0 135210..135839 + 209 15640175 - VC0144 - hypothetical protein 144 44.57 0 135888..136154 - 88 15640176 - VC0145 - hypothetical protein 145 49.83 0 136151..136750 - 199 15640177 - VC0146 - hypothetical protein 146 49.66 0 136954..138129 + 391 15640178 - VC0147 - cell division protein FtsY 147 50.85 0 138151..138852 + 233 15640179 - VC0148 - cell division ATP-binding protein FtsE 148 48.74 0 138842..139834 + 330 15640180 - VC0149 - cell division protein FtsX 149 49.94 0 140004..140864 + 286 15640181 - VC0150 - RNA polymerase factor sigma-32 150 49.32 0 141066..142466 - 466 15640182 - VC0151 - soluble pyridine nucleotide transhydrogenase 151 51.87 +1 142774..143415 + 213 15640183 - VC0152 - DNA-binding transcriptional repressor FabR 152 48.12 0 143455..143826 + 123 15640184 - VC0153 - hypothetical protein 153 47.84 0 143863..144972 - 369 15640185 - VC0154 - tRNA (uracil-5-)-methyltransferase 154 43.25 0 145370..147205 + 611 15640186 - VC0156 - vitamin B12 receptor 155 46.64 0 147278..148885 - 535 15640187 - VC0157 - alkaline serine protease 156 47.62 0 149278..150075 + 265 15640188 - VC0158 - glutamate racemase 157 44.44 0 150041..150499 - 152 15640189 - VC0159 - RNA-binding protein 158 35.00 -2 150905..151024 + 39 15640190 - VC0160 - hypothetical protein 159 48.16 0 156407..157303 - 298 15640191 - VC0161 - DNA-binding transcriptional regulator IlvY 160 47.61 0 157441..158925 + 494 15640192 - VC0162 - ketol-acid reductoisomerase 161 46.03 0 159052..159303 - 83 15640193 - VC0163 - hypothetical protein 162 50.05 0 159419..162529 - 1036 15640194 - VC0164 - multidrug resistance protein, putative 163 47.15 0 162541..163647 - 368 15640195 - VC0165 - hypothetical protein 164 42.38 -1 163666..164262 - 198 15640196 - VC0166 - TetR family transcriptional regulator 165 48.76 0 164408..166423 + 671 15640197 - VC0167 - ATP-dependent DNA helicase Rep 166 50.25 0 166490..166897 - 135 15640198 - VC0168 - cytochrome c5 167 30.36 -2 168232..168399 - 55 15640199 - VC0169 - hypothetical protein 168 50.29 0 168532..170247 + 571 15640200 - VC0170 - peptide ABC transporter, ATP-binding protein 169 47.70 0 170267..171895 + 542 15640201 - VC0171 - peptide ABC transporter, periplasmic peptide-binding protein 170 50.15 0 171999..173027 + 342 15640202 - VC0172 - peptide ABC transporter, permease protein 171 50.69 0 173030..173968 + 312 15640203 - VC0173 - peptide ABC transporter, permease protein 172 52.00 +1 174143..175090 + 315 15640204 - VC0174 - hypothetical protein 173 36.90 -2 175343..176941 - 532 15640205 - VC0175 - deoxycytidylate deaminase-related protein 174 39.16 -1 177450..177758 - 102 15640206 - VC0176 - transcriptional regulator, putative 175 37.77 -2 177861..178424 + 187 15640207 - VC0177 - hypothetical protein 176 42.51 -1 179338..180405 + 355 15640208 - VC0178 - patatin-related protein 177 41.80 -1 180419..181729 + 436 15640209 - VC0179 - hypothetical protein 178 43.53 0 181732..183486 + 584 15640210 - VC0180 - hypothetical protein 179 45.65 0 183476..183946 + 156 15640211 - VC0181 - hypothetical protein 180 37.27 -2 183957..184388 - 143 15640212 - VC0182 - hypothetical protein 181 37.55 -2 184360..186471 - 703 15640213 - VC0183 - hypothetical protein 182 39.61 -1 186481..188169 - 562 15640214 - VC0184 - hypothetical protein 183 36.95 -2 188166..189380 - 404 15640215 - VC0185 - transposase, putative 184 52.16 +1 189457..190821 - 454 15640216 - VC0186 - glutathione reductase 185 51.19 0 190915..191754 - 279 15640217 - VC0187 - hypothetical protein 186 52.13 +1 192034..194076 + 680 15640218 - VC0188 - oligopeptidase A 187 48.48 0 194101..194199 + 32 15640219 - VC0189 - hypothetical protein 188 53.08 +1 194214..196385 + 723 15640220 uvrD VC0190 - DNA-dependent helicase II 189 51.42 0 197130..197798 - 222 15640221 - VC0191 - hypothetical protein 190 50.06 0 197873..198685 - 270 15640222 - VC0192 - AraC/XylS family transcriptional regulator 191 46.88 0 198722..198817 - 31 15640223 - VC0193 - hypothetical protein 192 55.29 +1 198833..200599 - 588 15640224 - VC0194 - gamma-glutamyltranspeptidase 193 52.26 +1 200761..201669 - 302 15640225 - VC0195 - rarD protein 194 52.89 +1 201830..203665 + 611 161582034 - VC0196 - ATP-dependent DNA helicase RecQ 195 52.67 +1 203658..203957 + 99 15640227 - VC0197 - gene 3 protein-related protein 196 50.00 0 204113..204490 + 125 15640228 - VC0198 - hypothetical protein 197 50.71 0 204526..206361 - 611 15640229 - VC0199 - hemolysin secretion ATP-binding protein, putative 198 49.56 0 206433..208589 + 718 15640230 - VC0200 - iron(III) compound receptor 199 52.33 +1 208648..209505 + 285 15640231 - VC0201 - iron(III) ABC transporter, ATP-binding protein 200 53.54 +1 209496..210455 + 319 15640232 - VC0202 - iron(III) ABC transporter, periplasmic iron-compound-binding protein 201 56.01 +2 210452..212413 + 653 15640233 - VC0203 - iron-hydroxamate transporter permease subunit 202 53.36 +1 212440..213288 - 282 15640234 - VC0204 - hypothetical protein 203 35.94 -2 213331..213522 + 63 15640235 - VC0205 - hypothetical protein 204 53.70 +1 213504..214421 + 305 15640236 murQ VC0206 - N-acetylmuramic acid-6-phosphate etherase 205 51.90 +1 214449..215897 + 482 15640237 murP VC0207 - N-acetylmuramic acid phosphotransfer permease 206 43.35 0 216004..216492 - 162 15640238 - VC0208 - hypothetical protein 207 52.13 +1 216558..217424 - 288 15640239 - VC0209 - hypothetical protein 208 52.72 +1 217588..218304 + 238 161582033 rph VC0210 - ribonuclease PH 209 48.13 0 218670..219311 + 213 161582032 pyrE VC0211 - orotate phosphoribosyltransferase 210 52.76 +1 219397..220374 - 325 15640242 - VC0212 - lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 211 49.53 0 220385..221341 - 318 15640243 - VC0213 - lipid A biosynthesis lauroyl acyltransferase 212 48.05 0 221338..221928 - 196 161582031 slmA VC0214 - nucleoid occlusion protein 213 55.25 +1 222087..223286 - 399 15640245 - VC0215 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 214 50.44 0 223454..225148 + 564 15640246 - VC0216 - methyl-accepting chemotaxis protein 215 51.26 0 225260..225934 + 224 15640247 radC VC0217 - DNA repair protein RadC 216 44.73 0 226229..226465 + 78 15640248 - VC0218 - ribosomal protein L28 217 42.86 -1 226479..226646 + 55 15640249 rpmG VC0219 - 50S ribosomal protein L33 218 49.28 0 226867..227355 + 162 15640250 - VC0220 - hypothetical protein 219 52.22 +1 227365..228174 + 269 15640251 - VC0221 - formamidopyrimidine-DNA glycosylase 220 49.09 0 228271..228765 - 164 15640252 coaD VC0222 - phosphopantetheine adenylyltransferase 221 51.45 0 228876..229913 + 345 15640253 - VC0223 - ADP-heptose--LPS heptosyltransferase II, putative 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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