version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1638 44.59 0 1794166..1794387 + 73 15641665 - VC1661 - hypothetical protein 1639 48.69 0 1794393..1794659 - 88 15641666 - VC1662 - hypothetical protein 1640 47.07 0 1794806..1795249 + 147 15641667 - VC1663 - heat shock protein HslJ 1641 49.17 0 1795457..1796605 + 382 15641668 - VC1664 - hypothetical protein 1642 50.09 0 1796619..1798319 + 566 15641669 - VC1665 - ABC transporter, permease protein, putative 1643 48.72 0 1798285..1798947 + 220 15641670 - VC1666 - ABC transporter, ATP-binding protein, putative 1644 49.28 0 1798940..1799560 + 206 15641671 - VC1667 - hypothetical protein 1645 48.02 0 1799619..1800326 - 235 15641672 - VC1668 - pseudouridine synthase Rlu family protein 1646 46.92 0 1800425..1801771 - 448 15641673 - VC1669 - sodium-dependent transporter, putative 1647 48.93 0 1802327..1803781 + 484 15641674 cls VC1670 - cardiolipin synthetase 1648 50.46 0 1803862..1805052 + 396 15641675 - VC1671 - cystathionine beta-lyase 1649 48.28 0 1805139..1805720 - 193 15641676 - VC1672 - DNA-3-methyladenine glycosidase I 1650 49.87 0 1805807..1808920 - 1037 15641677 - VC1673 - AcrB/AcrD/AcrF family transporter 1651 49.64 0 1808898..1810007 - 369 15641678 - VC1674 - periplasmic linker protein, putative 1652 51.07 0 1809979..1811010 - 343 15641679 - VC1675 - multidrug resistance protein, putative 1653 52.04 +1 1811182..1811598 - 138 15641680 - VC1676 - phage shock protein C 1654 49.15 0 1811564..1811797 - 77 15641681 pspB VC1677 - phage shock protein B 1655 46.79 0 1811811..1812479 - 222 15641682 - VC1678 - phage shock protein A 1656 50.44 0 1812689..1813705 + 338 15641683 - VC1679 - psp operon transcriptional activator 1657 49.17 0 1813819..1815441 + 540 15641684 - VC1680 - peptide ABC transporter, periplasmic peptide-binding protein 1658 47.98 0 1815441..1816403 + 320 15641685 - VC1681 - peptide ABC transporter, permease protein 1659 48.99 0 1816390..1817277 + 295 15641686 - VC1682 - peptide ABC transporter, permease protein 1660 50.00 0 1817277..1818272 + 331 15641687 - VC1683 - peptide ABC transporter, ATP-binding protein 1661 49.56 0 1818269..1819057 + 262 15641688 - VC1684 - peptide ABC transporter, ATP-binding protein 1662 50.84 0 1819058..1819828 + 256 15641689 - VC1685 - hypothetical protein 1663 45.95 0 1819865..1820419 - 184 15641690 - VC1686 - hypothetical protein 1664 48.23 0 1820389..1821294 - 301 15641691 - VC1687 - putative manganese-dependent inorganic pyrophosphatase 1665 49.60 0 1821441..1822688 + 415 15641692 - VC1688 - hypothetical protein 1666 49.38 0 1822752..1823312 - 186 15641693 - VC1689 - hypothetical protein 1667 50.49 0 1823364..1824488 - 374 15641694 - VC1690 - alpha-1,6-galactosidase, putative 1668 42.42 -1 1824544..1824642 + 32 15641695 - VC1691 - hypothetical protein 1669 51.44 0 1824695..1827157 - 820 15641696 - VC1692 - trimethylamine-N-oxide reductase 1670 49.54 0 1827181..1828365 - 394 15641697 - VC1693 - cytochrome c-type protein TorC 1671 45.21 0 1828412..1828630 - 72 15641698 - VC1694 - napE protein 1672 46.38 0 1829274..1830116 - 280 15641699 - VC1695 - formate transporter 1, putative 1673 47.51 0 1830321..1830701 + 126 15641700 - VC1696 - DNA-binding protein inhibitor Id-2-related protein 1674 49.46 0 1830805..1831635 + 276 15641701 - VC1697 - hypothetical protein 1675 47.07 0 1831628..1832275 + 215 15641702 - VC1698 - hypothetical protein 1676 44.81 0 1832408..1832677 + 89 15641703 - VC1699 - hypothetical protein 1677 45.79 0 1832906..1833451 + 181 15641704 - VC1700 - intracellular septation protein A 1678 48.53 0 1833589..1834029 + 146 15641705 - VC1701 - hypothetical protein 1679 50.51 0 1834104..1834400 + 98 15641706 - VC1702 - YciI-like protein 1680 50.00 0 1834309..1834800 + 163 15641707 - VC1703 - hypothetical protein 1681 50.35 0 1835075..1837360 - 761 15641708 - VC1704 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1682 48.96 0 1837614..1837709 + 31 15641709 - VC1705 - hypothetical protein 1683 52.18 +1 1837756..1838673 + 305 15641710 - VC1706 - transcriptional activator MetR 1684 44.61 0 1838680..1838883 - 67 15641711 - VC1707 - hypothetical protein 1685 48.91 0 1838997..1839683 - 228 15641712 - VC1708 - hypothetical protein 1686 48.14 0 1839907..1842675 + 922 15641713 - VC1709 - zinc protease 1687 47.62 0 1842809..1845265 - 818 15641714 - VC1710 - hypothetical protein 1688 50.80 0 1845545..1847914 + 789 15641715 - VC1711 - hypothetical protein 1689 48.29 0 1847962..1848576 - 204 15641716 - VC1712 - hypothetical protein 1690 48.87 0 1848654..1849097 + 147 15641717 - VC1713 - AsnC family transcriptional regulator 1691 52.23 +1 1849179..1853654 - 1491 15641718 mukB VC1714 - cell division protein MukB 1692 52.15 +1 1853651..1854394 - 247 15641719 - VC1715 - condesin subunit E 1693 50.15 0 1854354..1855691 - 445 15641720 - VC1716 - condesin subunit F 1694 48.40 0 1855703..1856485 - 260 15641721 - VC1717 - putative metallothionein SmtA 1695 49.71 0 1856575..1857423 + 282 15641722 - VC1718 - hypothetical protein 1696 47.80 0 1857523..1858227 - 234 15641723 - VC1719 - DNA-binding transcriptional regulator TorR 1697 46.46 0 1858452..1859114 + 220 15641724 torD VC1720 - chaperone protein TorD 1698 48.37 0 1859521..1860531 + 336 15641725 - VC1721 - LacI family transcription regulator 1699 44.90 0 1860890..1861477 + 195 15641726 - VC1722 - hypothetical protein 1700 47.25 0 1861832..1862521 + 229 15641727 - VC1723 - hypothetical protein 1701 54.49 +1 1862555..1862866 + 103 15641728 - VC1724 - hypothetical protein 1702 47.50 0 1862871..1863689 - 272 15641729 - VC1725 - beta-ketoadipate enol-lactone hydrolase, putative 1703 48.80 0 1863877..1865331 - 484 15641730 glgA VC1726 - glycogen synthase 1704 46.55 0 1865333..1866550 - 405 15641731 glgC VC1727 - glucose-1-phosphate adenylyltransferase 1705 38.52 -2 1866682..1866816 + 44 15641732 - VC1728 - hypothetical protein 1706 46.85 0 1866932..1867042 + 36 15641733 - VC1729 - hypothetical protein 1707 50.32 0 1867219..1869849 - 876 15641734 - VC1730 - DNA topoisomerase I 1708 38.15 -2 1870186..1870434 + 82 15641735 - VC1731 - hypothetical protein 1709 50.66 0 1870525..1871805 - 426 15641736 - VC1732 - 3-phosphoshikimate 1-carboxyvinyltransferase 1710 43.14 -1 1871809..1872012 + 67 15641737 - VC1733 - hypothetical protein 1711 42.86 -1 1871987..1872091 + 34 15641738 - VC1734 - hypothetical protein 1712 50.55 0 1872072..1872803 + 243 15641739 aat VC1735 - leucyl/phenylalanyl-tRNA--protein transferase 1713 46.30 0 1872807..1873508 + 233 15641740 - VC1736 - arginyl-tRNA-protein transferase 1714 43.84 0 1873592..1873810 + 72 15641741 infA VC1737 - translation initiation factor IF-1 1715 50.33 0 1874114..1875013 - 299 15641742 - VC1738 - hypothetical protein 1716 49.16 0 1875028..1875324 - 98 15641743 - VC1739 - hypothetical protein 1717 51.60 0 1875517..1877799 - 760 15641744 - VC1740 - acyl-CoA dehydrogenase 1718 47.70 0 1877855..1878529 - 224 15641745 - VC1741 - TetR family transcriptional regulator 1719 42.03 -1 1878784..1878921 + 45 15641746 - VC1742 - hypothetical protein 1720 49.32 0 1878900..1879925 + 341 15641747 - VC1743 - hypothetical protein 1721 48.58 0 1879970..1880251 + 93 15641748 - VC1744 - hypothetical protein 1722 50.24 0 1880232..1881698 - 488 15641749 - VC1745 - succinate-semialdehyde dehydrogenase 1723 47.78 0 1881716..1882345 - 209 15641750 - VC1746 - TetR family transcriptional regulator 1724 39.56 -1 1882271..1882495 + 74 15641751 - VC1747 - hypothetical protein 1725 46.91 0 1882572..1883396 + 274 15641752 - VC1748 - hypothetical protein 1726 45.23 0 1883296..1884522 + 408 15641753 - VC1749 - hypothetical protein 1727 44.12 0 1884533..1885654 + 373 15641754 - VC1750 - hypothetical protein 1728 45.39 0 1885670..1886548 - 292 15641755 - VC1751 - hypothetical protein 1729 42.86 -1 1887312..1887437 + 41 15641756 - VC1752 - hypothetical protein 1730 45.21 0 1887601..1888905 + 434 15641757 - VC1753 - paraquat-inducible protein A 1731 45.80 0 1888902..1890545 + 547 15641758 - VC1754 - paraquat-inducible protein B 1732 48.70 0 1890542..1891120 + 192 15641759 - VC1755 - hypothetical protein 1733 51.14 0 1891336..1892430 + 364 15641760 - VC1756 - periplasmic linker protein, putative 1734 52.93 +1 1892430..1895480 + 1016 15641761 - VC1757 - AcrB/AcrD/AcrF family transporter 1735 44.09 0 1896092..1897327 + 411 15641762 - VC1758 - phage family integrase 1736 41.09 -1 1898009..1900831 - 940 15641763 - VC1760 - helicase, putative 1737 40.23 -1 1900851..1901459 - 202 15641764 - VC1761 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0