version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1576 51.97 +1 1706985..1708202 - 405 15641603 - VC1595 - galactokinase 1577 49.20 0 1708211..1709275 - 354 161582002 - VC1596 - galactose-1-phosphate uridylyltransferase 1578 49.02 0 1709719..1711152 - 477 15641605 - VC1597 - multidrug transporter, putative 1579 45.58 0 1711301..1712125 + 274 15641606 - VC1598 - ABC transporter, periplasmic substrate-binding protein-related protein 1580 42.66 -1 1712741..1713802 + 353 15641607 - VC1599 - GGDEF family protein 1581 42.75 -1 1713805..1714494 - 229 15641608 - VC1600 - hypothetical protein 1582 44.15 0 1714609..1715412 - 267 15641609 - VC1601 - hypothetical protein 1583 45.19 0 1715544..1716530 - 328 15641610 - VC1602 - chemotaxis protein CheV 1584 43.50 0 1716549..1717325 - 258 15641611 - VC1603 - hypothetical protein 1585 49.20 0 1717391..1718077 - 228 15641612 - VC1604 - response regulator 1586 48.55 0 1718077..1719693 - 538 15641613 - VC1605 - sensor kinase citA, putative 1587 48.08 0 1720423..1721853 + 476 15641614 - VC1606 - hypothetical protein 1588 51.38 0 1721865..1722839 + 324 15641615 - VC1607 - hypothetical protein 1589 49.74 0 1722843..1724006 + 387 15641616 - VC1608 - hypothetical protein 1590 49.14 0 1723925..1725151 + 408 15641617 - VC1609 - hypothetical protein 1591 47.33 0 1725155..1725604 - 149 15641618 - VC1610 - hypothetical protein 1592 48.75 0 1725652..1726611 + 319 15641619 - VC1611 - homoserine O-succinyltransferase 1593 45.94 0 1726820..1727533 + 237 15641620 - VC1612 - fimbrial biogenesis and twitching motility protein, putative 1594 44.00 0 1727537..1727761 - 74 15641621 - VC1613 - hypothetical protein 1595 46.65 0 1727960..1729048 - 362 15641622 - VC1614 - putative SAM-dependent methyltransferase 1596 43.66 0 1729045..1729557 - 170 15641623 - VC1615 - hypothetical protein 1597 44.02 0 1729725..1729958 + 77 15641624 - VC1616 - glutaredoxin, putative 1598 44.56 0 1729989..1730879 - 296 15641625 - VC1617 - LysR family transcriptional regulator 1599 49.84 0 1730964..1732181 + 405 15641626 - VC1618 - multidrug resistance protein, putative 1600 44.63 0 1732238..1732786 + 182 15641627 - VC1619 - hypothetical protein 1601 46.26 0 1741764..1743101 + 445 15641628 - VC1621 - agglutination protein 1602 46.64 0 1743103..1743741 + 212 15641629 - VC1622 - outer membrane protein, putative 1603 45.79 0 1743877..1745040 - 387 15641630 - VC1623 - carboxynorspermidine decarboxylase 1604 47.71 0 1745276..1746520 - 414 15641631 - VC1624 - hypothetical protein 1605 47.52 0 1750016..1751164 - 382 15641632 nhaA VC1627 - pH-dependent sodium/proton antiporter 1606 49.15 0 1751443..1752561 - 372 15641633 - VC1628 - hypothetical protein 1607 48.39 0 1752562..1755072 - 836 15641634 - VC1629 - hypothetical protein 1608 49.85 0 1754996..1755679 - 227 15641635 - VC1630 - ABC transporter, ATP-binding protein 1609 50.47 0 1755793..1757169 - 458 15641636 - VC1631 - hypothetical protein 1610 51.01 0 1757297..1758733 + 478 15641637 - VC1632 - hypothetical protein 1611 46.07 0 1758800..1759537 - 245 15641638 - VC1633 - hypothetical protein 1612 51.58 0 1759459..1760664 - 401 15641639 - VC1634 - bicyclomycin/multidrug efflux system 1613 47.99 0 1760983..1761678 - 231 15641640 - VC1635 - ribosomal small subunit pseudouridine synthase A 1614 51.32 0 1761623..1763596 + 657 15641641 - VC1636 - helicase-related protein 1615 46.81 0 1763861..1764268 + 135 15641642 - VC1637 - hypothetical protein 1616 49.09 0 1764280..1764939 + 219 15641643 - VC1638 - DNA-binding response regulator 1617 49.39 0 1764914..1766302 + 462 15641644 - VC1639 - sensor histidine kinase 1618 48.03 0 1766460..1766738 + 92 15641645 - VC1640 - 50S ribosomal protein L25 1619 38.50 -2 1766888..1767661 - 257 15641646 - VC1641 - hypothetical protein 1620 48.01 0 1767753..1768154 - 133 15641647 - VC1642 - hypothetical protein 1621 47.29 0 1768345..1770135 + 596 15641648 - VC1643 - methyl-accepting chemotaxis protein 1622 47.71 0 1770467..1771711 + 414 15641649 - VC1644 - hypothetical protein 1623 46.03 0 1771809..1772438 - 209 15641650 - VC1645 - hypothetical protein 1624 46.08 0 1772606..1772809 - 67 15641651 - VC1646 - hypothetical protein 1625 48.43 0 1772850..1774763 + 637 15641652 - VC1647 - hypothetical protein 1626 50.00 0 1774727..1774822 + 31 15641653 - VC1648 - hypothetical protein 1627 42.50 -1 1774844..1776490 - 548 15641654 - VC1649 - trypsin, putative 1628 48.03 0 1776818..1779274 + 818 15641655 - VC1650 - collagenase 1629 44.95 0 1779308..1780969 - 553 15641656 - VC1651 - response regulator VieB 1630 46.89 0 1780981..1782735 - 584 15641657 - VC1652 - response regulator VieA 1631 43.82 0 1782740..1786180 - 1146 15641658 - VC1653 - sensory box sensor histidine kinase/response regulator VieS 1632 42.34 -1 1786522..1786632 + 36 15641659 - VC1654 - hypothetical protein 1633 49.93 0 1786971..1788326 + 451 15641660 - VC1655 - magnesium transporter 1634 48.73 0 1788409..1789272 - 287 15641661 - VC1656 - hypothetical protein 1635 40.43 -1 1789284..1789424 + 46 15641662 - VC1657 - hypothetical protein 1636 47.85 0 1789608..1790861 + 417 15641663 - VC1658 - serine transporter 1637 52.00 +1 1791030..1791977 + 315 15641664 - VC1659 - hypothetical protein 1638 44.59 0 1794166..1794387 + 73 15641665 - VC1661 - hypothetical protein 1639 48.69 0 1794393..1794659 - 88 15641666 - VC1662 - hypothetical protein 1640 47.07 0 1794806..1795249 + 147 15641667 - VC1663 - heat shock protein HslJ 1641 49.17 0 1795457..1796605 + 382 15641668 - VC1664 - hypothetical protein 1642 50.09 0 1796619..1798319 + 566 15641669 - VC1665 - ABC transporter, permease protein, putative 1643 48.72 0 1798285..1798947 + 220 15641670 - VC1666 - ABC transporter, ATP-binding protein, putative 1644 49.28 0 1798940..1799560 + 206 15641671 - VC1667 - hypothetical protein 1645 48.02 0 1799619..1800326 - 235 15641672 - VC1668 - pseudouridine synthase Rlu family protein 1646 46.92 0 1800425..1801771 - 448 15641673 - VC1669 - sodium-dependent transporter, putative 1647 48.93 0 1802327..1803781 + 484 15641674 cls VC1670 - cardiolipin synthetase 1648 50.46 0 1803862..1805052 + 396 15641675 - VC1671 - cystathionine beta-lyase 1649 48.28 0 1805139..1805720 - 193 15641676 - VC1672 - DNA-3-methyladenine glycosidase I 1650 49.87 0 1805807..1808920 - 1037 15641677 - VC1673 - AcrB/AcrD/AcrF family transporter 1651 49.64 0 1808898..1810007 - 369 15641678 - VC1674 - periplasmic linker protein, putative 1652 51.07 0 1809979..1811010 - 343 15641679 - VC1675 - multidrug resistance protein, putative 1653 52.04 +1 1811182..1811598 - 138 15641680 - VC1676 - phage shock protein C 1654 49.15 0 1811564..1811797 - 77 15641681 pspB VC1677 - phage shock protein B 1655 46.79 0 1811811..1812479 - 222 15641682 - VC1678 - phage shock protein A 1656 50.44 0 1812689..1813705 + 338 15641683 - VC1679 - psp operon transcriptional activator 1657 49.17 0 1813819..1815441 + 540 15641684 - VC1680 - peptide ABC transporter, periplasmic peptide-binding protein 1658 47.98 0 1815441..1816403 + 320 15641685 - VC1681 - peptide ABC transporter, permease protein 1659 48.99 0 1816390..1817277 + 295 15641686 - VC1682 - peptide ABC transporter, permease protein 1660 50.00 0 1817277..1818272 + 331 15641687 - VC1683 - peptide ABC transporter, ATP-binding protein 1661 49.56 0 1818269..1819057 + 262 15641688 - VC1684 - peptide ABC transporter, ATP-binding protein 1662 50.84 0 1819058..1819828 + 256 15641689 - VC1685 - hypothetical protein 1663 45.95 0 1819865..1820419 - 184 15641690 - VC1686 - hypothetical protein 1664 48.23 0 1820389..1821294 - 301 15641691 - VC1687 - putative manganese-dependent inorganic pyrophosphatase 1665 49.60 0 1821441..1822688 + 415 15641692 - VC1688 - hypothetical protein 1666 49.38 0 1822752..1823312 - 186 15641693 - VC1689 - hypothetical protein 1667 50.49 0 1823364..1824488 - 374 15641694 - VC1690 - alpha-1,6-galactosidase, putative 1668 42.42 -1 1824544..1824642 + 32 15641695 - VC1691 - hypothetical protein 1669 51.44 0 1824695..1827157 - 820 15641696 - VC1692 - trimethylamine-N-oxide reductase 1670 49.54 0 1827181..1828365 - 394 15641697 - VC1693 - cytochrome c-type protein TorC 1671 45.21 0 1828412..1828630 - 72 15641698 - VC1694 - napE protein 1672 46.38 0 1829274..1830116 - 280 15641699 - VC1695 - formate transporter 1, putative 1673 47.51 0 1830321..1830701 + 126 15641700 - VC1696 - DNA-binding protein inhibitor Id-2-related protein 1674 49.46 0 1830805..1831635 + 276 15641701 - VC1697 - hypothetical protein 1675 47.07 0 1831628..1832275 + 215 15641702 - VC1698 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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