version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1516 48.71 0 1647373..1648965 - 530 15641543 - VC1535 - methyl-accepting chemotaxis protein 1517 43.61 0 1648958..1649395 - 145 15641544 - VC1536 - hypothetical protein 1518 46.11 0 1649484..1649984 + 166 15641545 - VC1537 - lipoprotein NlpC 1519 43.29 0 1649994..1650425 - 143 15641546 - VC1538 - hypothetical protein 1520 44.87 0 1650858..1651724 + 288 15641547 - VC1539 - hypothetical protein 1521 49.13 0 1652340..1653713 + 457 161582004 - VC1540 - multidrug efflux protein 1522 47.76 0 1653917..1654900 + 327 15641549 - VC1541 - hypothetical protein 1523 49.82 0 1654907..1655755 - 282 15641550 - VC1542 - DNA ligase 1524 48.35 0 1656062..1657240 - 392 15641551 - VC1543 - hypothetical protein 1525 52.01 +1 1657237..1657857 - 206 15641552 - VC1544 - tonB2 protein 1526 50.12 0 1657857..1658261 - 134 15641553 - VC1545 - TonB system transport protein ExbD2 1527 49.72 0 1658258..1658800 - 180 15641554 - VC1546 - TonB system transport protein ExbB2 1528 50.87 0 1658807..1660180 - 457 15641555 - VC1547 - biopolymer transport protein ExbB-related protein 1529 48.48 0 1660180..1660938 - 252 15641556 - VC1548 - hypothetical protein 1530 48.35 0 1661257..1662561 + 434 15641557 - VC1549 - glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein 1531 51.02 0 1662637..1663518 + 293 15641558 - VC1550 - glycerol-3-phosphate ABC transporter, permease protein 1532 46.50 0 1663528..1664370 + 280 15641559 - VC1551 - glycerol-3-phosphate ABC transporter, permease protein 1533 49.75 0 1664360..1665541 + 393 15641560 - VC1552 - glycerol-3-phosphate transporter ATP-binding subunit 1534 48.82 0 1665566..1666327 + 253 15641561 - VC1553 - glycerol-3-phosphate regulon repressor 1535 47.90 0 1666355..1667068 + 237 15641562 - VC1554 - glycerophosphoryl diester phosphodiesterase, putative 1536 51.27 0 1667144..1667656 - 170 15641563 - VC1555 - hypothetical protein 1537 52.07 +1 1667625..1667987 - 120 15641564 - VC1556 - hypothetical protein 1538 48.50 0 1668122..1669156 - 344 15641565 - VC1557 - LacI family transcription regulator 1539 47.32 0 1669192..1670628 - 478 15641566 - VC1558 - 6-phospho-beta-glucosidase 1540 48.04 0 1670919..1671020 + 33 15641567 - VC1559 - hypothetical protein 1541 51.13 0 1671041..1673215 + 724 15641568 - VC1560 - catalase/peroxidase 1542 43.12 -1 1673280..1674209 - 309 15641569 - VC1561 - LysR family transcriptional regulator 1543 44.25 0 1674273..1675445 + 390 15641570 - VC1562 - beta-lactamase-related protein 1544 47.39 0 1675595..1676611 + 338 15641571 - VC1563 - hypothetical protein 1545 51.22 0 1676602..1676724 + 40 15641572 - VC1564 - hypothetical protein 1546 49.05 0 1676745..1678004 + 419 15641573 - VC1565 - outer membrane protein TolC, putative 1547 50.95 0 1678004..1679218 + 404 15641574 - VC1566 - hypothetical protein 1548 50.70 0 1679222..1680499 + 425 15641575 - VC1567 - hypothetical protein 1549 50.00 0 1680499..1681200 + 233 15641576 - VC1568 - ABC transporter, ATP-binding protein 1550 50.00 0 1681166..1681267 + 33 15641577 - VC1569 - hypothetical protein 1551 50.65 0 1681274..1682266 - 330 15641578 - VC1570 - quinol oxidase, subunit II 1552 50.75 0 1682263..1683600 - 445 15641579 - VC1571 - quinol oxidase, subunit I 1553 43.57 0 1684123..1684503 + 126 15641580 - VC1572 - hypothetical protein 1554 51.44 0 1684519..1685904 + 461 15641581 fumC VC1573 - fumarate hydratase 1555 44.79 0 1686049..1686432 - 127 15641582 - VC1574 - hypothetical protein 1556 47.49 0 1686477..1686935 - 152 15641583 - VC1575 - hypothetical protein 1557 44.34 0 1686965..1687282 - 105 15641584 - VC1576 - hypothetical protein 1558 47.20 0 1687438..1688259 - 273 15641585 - VC1577 - hypothetical protein 1559 35.86 -2 1688261..1688497 - 78 15641586 - VC1578 - hypothetical protein 1560 45.72 0 1688481..1690151 - 556 15641587 - VC1579 - enterobactin synthetase component F-related protein 1561 48.57 0 1690215..1691126 - 303 15641588 - VC1580 - LysR family transcriptional regulator 1562 52.68 +1 1691206..1692756 + 516 15641589 - VC1581 - NADH dehydrogenase subunit L 1563 54.07 +1 1692681..1695269 + 862 15641590 - VC1582 - hypothetical protein 1564 50.78 0 1695314..1695829 - 171 15641591 - VC1583 - superoxide dismutase, Cu-Zn 1565 46.56 0 1695869..1696435 - 188 15641592 - VC1584 - ankB protein 1566 44.84 0 1696499..1698202 - 567 15641593 - VC1585 - catalase 1567 38.24 -2 1698376..1698477 - 33 15641594 - VC1586 - hypothetical protein 1568 39.68 -1 1698457..1698897 + 146 15641595 - VC1587 - hypothetical protein 1569 48.07 0 1699073..1699954 - 293 15641596 - VC1588 - LysR family transcriptional regulator 1570 48.85 0 1700060..1700845 + 261 15641597 - VC1589 - alpha-acetolactate decarboxylase 1571 52.11 +1 1700984..1702687 + 567 15641598 - VC1590 - acetolactate synthase 1572 52.17 +1 1702684..1703442 + 252 15641599 - VC1591 - short chain dehydrogenase/reductase family oxidoreductase 1573 45.73 0 1703680..1704534 + 284 15641600 - VC1592 - hypothetical protein 1574 42.79 -1 1704617..1705906 + 429 15641601 - VC1593 - GGDEF family protein 1575 51.45 0 1705924..1706955 - 343 161582003 galM VC1594 - aldose 1-epimerase 1576 51.97 +1 1706985..1708202 - 405 15641603 - VC1595 - galactokinase 1577 49.20 0 1708211..1709275 - 354 161582002 - VC1596 - galactose-1-phosphate uridylyltransferase 1578 49.02 0 1709719..1711152 - 477 15641605 - VC1597 - multidrug transporter, putative 1579 45.58 0 1711301..1712125 + 274 15641606 - VC1598 - ABC transporter, periplasmic substrate-binding protein-related protein 1580 42.66 -1 1712741..1713802 + 353 15641607 - VC1599 - GGDEF family protein 1581 42.75 -1 1713805..1714494 - 229 15641608 - VC1600 - hypothetical protein 1582 44.15 0 1714609..1715412 - 267 15641609 - VC1601 - hypothetical protein 1583 45.19 0 1715544..1716530 - 328 15641610 - VC1602 - chemotaxis protein CheV 1584 43.50 0 1716549..1717325 - 258 15641611 - VC1603 - hypothetical protein 1585 49.20 0 1717391..1718077 - 228 15641612 - VC1604 - response regulator 1586 48.55 0 1718077..1719693 - 538 15641613 - VC1605 - sensor kinase citA, putative 1587 48.08 0 1720423..1721853 + 476 15641614 - VC1606 - hypothetical protein 1588 51.38 0 1721865..1722839 + 324 15641615 - VC1607 - hypothetical protein 1589 49.74 0 1722843..1724006 + 387 15641616 - VC1608 - hypothetical protein 1590 49.14 0 1723925..1725151 + 408 15641617 - VC1609 - hypothetical protein 1591 47.33 0 1725155..1725604 - 149 15641618 - VC1610 - hypothetical protein 1592 48.75 0 1725652..1726611 + 319 15641619 - VC1611 - homoserine O-succinyltransferase 1593 45.94 0 1726820..1727533 + 237 15641620 - VC1612 - fimbrial biogenesis and twitching motility protein, putative 1594 44.00 0 1727537..1727761 - 74 15641621 - VC1613 - hypothetical protein 1595 46.65 0 1727960..1729048 - 362 15641622 - VC1614 - putative SAM-dependent methyltransferase 1596 43.66 0 1729045..1729557 - 170 15641623 - VC1615 - hypothetical protein 1597 44.02 0 1729725..1729958 + 77 15641624 - VC1616 - glutaredoxin, putative 1598 44.56 0 1729989..1730879 - 296 15641625 - VC1617 - LysR family transcriptional regulator 1599 49.84 0 1730964..1732181 + 405 15641626 - VC1618 - multidrug resistance protein, putative 1600 44.63 0 1732238..1732786 + 182 15641627 - VC1619 - hypothetical protein 1601 46.26 0 1741764..1743101 + 445 15641628 - VC1621 - agglutination protein 1602 46.64 0 1743103..1743741 + 212 15641629 - VC1622 - outer membrane protein, putative 1603 45.79 0 1743877..1745040 - 387 15641630 - VC1623 - carboxynorspermidine decarboxylase 1604 47.71 0 1745276..1746520 - 414 15641631 - VC1624 - hypothetical protein 1605 47.52 0 1750016..1751164 - 382 15641632 nhaA VC1627 - pH-dependent sodium/proton antiporter 1606 49.15 0 1751443..1752561 - 372 15641633 - VC1628 - hypothetical protein 1607 48.39 0 1752562..1755072 - 836 15641634 - VC1629 - hypothetical protein 1608 49.85 0 1754996..1755679 - 227 15641635 - VC1630 - ABC transporter, ATP-binding protein 1609 50.47 0 1755793..1757169 - 458 15641636 - VC1631 - hypothetical protein 1610 51.01 0 1757297..1758733 + 478 15641637 - VC1632 - hypothetical protein 1611 46.07 0 1758800..1759537 - 245 15641638 - VC1633 - hypothetical protein 1612 51.58 0 1759459..1760664 - 401 15641639 - VC1634 - bicyclomycin/multidrug efflux system 1613 47.99 0 1760983..1761678 - 231 15641640 - VC1635 - ribosomal small subunit pseudouridine synthase A 1614 51.32 0 1761623..1763596 + 657 15641641 - VC1636 - helicase-related protein 1615 46.81 0 1763861..1764268 + 135 15641642 - VC1637 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0