version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1454 38.10 -2 1579039..1579206 - 55 15641481 - VC1471 - hypothetical protein 1455 46.43 0 1579199..1579366 - 55 15641482 - VC1472 - hypothetical protein 1456 50.36 0 1579444..1580136 - 230 15641483 - VC1473 - hypothetical protein 1457 46.67 0 1580266..1580550 - 94 15641484 - VC1474 - hypothetical protein 1458 48.88 0 1580555..1582123 - 522 15641485 - VC1475 - phage replication protein Cri 1459 42.94 -1 1583160..1583513 + 117 15641486 - VC1477 - transposase OrfAB, subunit A 1460 44.44 0 1583510..1584382 + 290 15641487 - VC1478 - transposase OrfAB, subunit B 1461 37.22 -2 1585291..1585650 - 119 15641488 - VC1479 - hypothetical protein 1462 43.54 0 1585761..1586093 - 110 15641489 - VC1480 - hypothetical protein 1463 40.20 -1 1586098..1586607 - 169 15641490 - VC1481 - hypothetical protein 1464 43.74 0 1586564..1588360 + 598 15641491 - VC1482 - ATP-dependent protease LA-related protein 1465 44.51 0 1588425..1588943 + 172 15641492 - VC1483 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 1466 45.40 0 1589026..1589199 - 57 15641493 - VC1484 - ribosome modulation factor 1467 45.72 0 1589366..1591060 - 564 15641494 - VC1485 - hypothetical protein 1468 44.95 0 1591066..1592985 - 639 15641495 - VC1486 - ABC transporter ATPase component 1469 41.15 -1 1592963..1593205 - 80 15641496 - VC1487 - hypothetical protein 1470 46.26 0 1593214..1595340 - 708 15641497 - VC1488 - 23S rRNA m(2)G2445 methyltransferase 1471 34.09 -2 1595599..1595730 - 43 15641498 - VC1489 - hypothetical protein 1472 44.75 0 1595800..1596342 - 180 15641499 - VC1490 - hypothetical protein 1473 45.40 0 1596497..1597507 - 336 15641500 - VC1491 - dihydroorotate dehydrogenase 2 1474 46.80 0 1597581..1602422 - 1613 15641501 - VC1492 - hypothetical protein 1475 38.82 -2 1602611..1602847 - 78 15641502 - VC1493 - hypothetical protein 1476 47.76 0 1602881..1605487 - 868 15641503 - VC1494 - aminopeptidase N 1477 43.38 0 1605686..1606402 - 238 15641504 - VC1495 - hypothetical protein 1478 44.24 0 1606511..1608508 - 665 15641505 - VC1496 - carboxy-terminal protease 1479 46.89 0 1608526..1609152 - 208 15641506 - VC1497 - putative solute/DNA competence effector 1480 43.70 0 1609253..1609831 - 192 15641507 - VC1498 - hypothetical protein 1481 46.48 0 1609776..1611608 + 610 15641508 - VC1499 - ABC transporter, ATP-binding protein 1482 48.17 0 1611642..1612901 + 419 15641509 - VC1500 - PqiA family protein 1483 49.05 0 1612911..1615550 + 879 15641510 - VC1501 - hypothetical protein 1484 48.74 0 1615581..1617092 + 503 15641511 yebU VC1502 - rRNA (cytosine-C(5)-)-methyltransferase RsmF 1485 43.92 0 1617274..1618170 - 298 15641512 - VC1503 - hypothetical protein 1486 47.76 0 1618209..1618700 + 163 15641513 - VC1504 - hypothetical protein 1487 45.88 0 1618697..1619557 + 286 15641514 - VC1505 - hypothetical protein 1488 47.80 0 1619550..1620026 - 158 15641515 - VC1506 - hypothetical protein 1489 48.06 0 1620176..1621363 + 395 15641516 - VC1507 - phospho-2-dehydro-3-deoxyheptonate aldolase 1490 47.00 0 1621375..1621857 + 160 15641517 - VC1508 - nucleotide-binding protein 1491 50.77 0 1621992..1622771 - 259 15641518 - VC1509 - NAD-dependent deacetylase 1492 47.99 0 1622869..1623291 - 140 15641519 - VC1510 - hypothetical protein 1493 49.53 0 1623278..1624351 - 357 15641520 - VC1511 - formate dehydrogenase, cytochrome B556 subunit 1494 53.04 +1 1624352..1624960 - 202 15641521 - VC1512 - formate dehydrogenase, iron-sulfur subunit 1495 48.99 0 1627838..1628035 - 65 15641522 - VC1514 - hypothetical protein 1496 50.23 0 1628113..1628769 - 218 15641523 - VC1515 - chaperone, formate dehydrogenase-specific, putative 1497 50.30 0 1628795..1630456 - 553 15641524 - VC1516 - iron-sulfur cluster-binding protein 1498 48.65 0 1630655..1631320 - 221 15641525 - VC1517 - hypothetical protein 1499 53.25 +1 1631247..1631723 - 158 15641526 - VC1518 - hypothetical protein 1500 48.92 0 1631768..1632781 + 337 15641527 - VC1519 - formate dehydrogenase accessory protein 1501 48.84 0 1632888..1634480 - 530 15641528 - VC1520 - ABC transporter, ATP-binding protein 1502 47.64 0 1634692..1636725 - 677 15641529 - VC1521 - sensor histidine kinase 1503 50.79 0 1636715..1638169 - 484 15641530 - VC1522 - sigma-54 dependent response regulator 1504 46.62 0 1638461..1639288 + 275 15641531 - VC1523 - hypothetical protein 1505 51.65 0 1639295..1639993 + 232 15641532 - VC1524 - ABC transporter, permease protein 1506 48.96 0 1640002..1640724 + 240 15641533 - VC1525 - ABC transporter, ATP-binding protein 1507 48.69 0 1640678..1641289 + 203 15641534 mobA VC1526 - molybdopterin-guanine dinucleotide biosynthesis protein A 1508 50.36 0 1641286..1643106 + 606 15641535 - VC1527 - molybdopterin biosynthesis MoeA protein 1509 39.90 -1 1643196..1643576 - 126 15641536 - VC1528 - hypothetical protein 1510 39.91 -1 1643549..1643974 - 141 15641537 - VC1529 - hypothetical protein 1511 38.89 -2 1643985..1644146 - 53 15641538 - VC1530 - hypothetical protein 1512 42.39 -1 1644190..1644465 + 91 15641539 - VC1531 - hypothetical protein 1513 49.72 0 1644672..1645580 - 302 15641540 - VC1532 - N-acetyl-D-glucosamine kinase 1514 47.29 0 1645743..1646480 - 245 15641541 - VC1533 - hypothetical protein 1515 48.42 0 1646457..1647371 + 304 15641542 - VC1534 - hypothetical protein 1516 48.71 0 1647373..1648965 - 530 15641543 - VC1535 - methyl-accepting chemotaxis protein 1517 43.61 0 1648958..1649395 - 145 15641544 - VC1536 - hypothetical protein 1518 46.11 0 1649484..1649984 + 166 15641545 - VC1537 - lipoprotein NlpC 1519 43.29 0 1649994..1650425 - 143 15641546 - VC1538 - hypothetical protein 1520 44.87 0 1650858..1651724 + 288 15641547 - VC1539 - hypothetical protein 1521 49.13 0 1652340..1653713 + 457 161582004 - VC1540 - multidrug efflux protein 1522 47.76 0 1653917..1654900 + 327 15641549 - VC1541 - hypothetical protein 1523 49.82 0 1654907..1655755 - 282 15641550 - VC1542 - DNA ligase 1524 48.35 0 1656062..1657240 - 392 15641551 - VC1543 - hypothetical protein 1525 52.01 +1 1657237..1657857 - 206 15641552 - VC1544 - tonB2 protein 1526 50.12 0 1657857..1658261 - 134 15641553 - VC1545 - TonB system transport protein ExbD2 1527 49.72 0 1658258..1658800 - 180 15641554 - VC1546 - TonB system transport protein ExbB2 1528 50.87 0 1658807..1660180 - 457 15641555 - VC1547 - biopolymer transport protein ExbB-related protein 1529 48.48 0 1660180..1660938 - 252 15641556 - VC1548 - hypothetical protein 1530 48.35 0 1661257..1662561 + 434 15641557 - VC1549 - glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein 1531 51.02 0 1662637..1663518 + 293 15641558 - VC1550 - glycerol-3-phosphate ABC transporter, permease protein 1532 46.50 0 1663528..1664370 + 280 15641559 - VC1551 - glycerol-3-phosphate ABC transporter, permease protein 1533 49.75 0 1664360..1665541 + 393 15641560 - VC1552 - glycerol-3-phosphate transporter ATP-binding subunit 1534 48.82 0 1665566..1666327 + 253 15641561 - VC1553 - glycerol-3-phosphate regulon repressor 1535 47.90 0 1666355..1667068 + 237 15641562 - VC1554 - glycerophosphoryl diester phosphodiesterase, putative 1536 51.27 0 1667144..1667656 - 170 15641563 - VC1555 - hypothetical protein 1537 52.07 +1 1667625..1667987 - 120 15641564 - VC1556 - hypothetical protein 1538 48.50 0 1668122..1669156 - 344 15641565 - VC1557 - LacI family transcription regulator 1539 47.32 0 1669192..1670628 - 478 15641566 - VC1558 - 6-phospho-beta-glucosidase 1540 48.04 0 1670919..1671020 + 33 15641567 - VC1559 - hypothetical protein 1541 51.13 0 1671041..1673215 + 724 15641568 - VC1560 - catalase/peroxidase 1542 43.12 -1 1673280..1674209 - 309 15641569 - VC1561 - LysR family transcriptional regulator 1543 44.25 0 1674273..1675445 + 390 15641570 - VC1562 - beta-lactamase-related protein 1544 47.39 0 1675595..1676611 + 338 15641571 - VC1563 - hypothetical protein 1545 51.22 0 1676602..1676724 + 40 15641572 - VC1564 - hypothetical protein 1546 49.05 0 1676745..1678004 + 419 15641573 - VC1565 - outer membrane protein TolC, putative 1547 50.95 0 1678004..1679218 + 404 15641574 - VC1566 - hypothetical protein 1548 50.70 0 1679222..1680499 + 425 15641575 - VC1567 - hypothetical protein 1549 50.00 0 1680499..1681200 + 233 15641576 - VC1568 - ABC transporter, ATP-binding protein 1550 50.00 0 1681166..1681267 + 33 15641577 - VC1569 - hypothetical protein 1551 50.65 0 1681274..1682266 - 330 15641578 - VC1570 - quinol oxidase, subunit II 1552 50.75 0 1682263..1683600 - 445 15641579 - VC1571 - quinol oxidase, subunit I 1553 43.57 0 1684123..1684503 + 126 15641580 - VC1572 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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