version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1318 48.55 0 1416672..1417223 - 183 15641345 - VC1333 - hypothetical protein 1319 52.57 +1 1417421..1418392 - 323 15641346 - VC1334 - hypothetical protein 1320 49.58 0 1419022..1419729 + 235 15641347 - VC1335 - GntR family transcriptional regulator 1321 52.32 +1 1419710..1420636 + 308 15641348 prpB VC1336 - 2-methylisocitrate lyase 1322 52.65 +1 1420812..1421945 + 377 15641349 - VC1337 - methylcitrate synthase 1323 54.55 +1 1422041..1424647 + 868 15641350 - VC1338 - aconitate hydratase 1324 54.53 +1 1424656..1425858 + 400 15641351 - VC1339 - hypothetical protein 1325 53.24 +1 1425842..1427740 + 632 15641352 - VC1340 - prpE protein 1326 46.33 0 1427914..1428390 + 158 15641353 - VC1341 - acetyltransferase, putative 1327 47.93 0 1428471..1429868 + 465 15641354 - VC1342 - MutT/nudix family protein 1328 49.05 0 1429934..1431040 - 368 15641355 - VC1343 - M20A family peptidase 1329 48.20 0 1431464..1432573 + 369 15641356 - VC1344 - 4-hydroxyphenylpyruvate dioxygenase 1330 52.07 +1 1432566..1433702 + 378 15641357 - VC1345 - oxidoreductase, putative 1331 51.47 0 1433709..1434728 + 339 15641358 - VC1346 - hypothetical protein 1332 48.77 0 1434725..1435372 + 215 15641359 - VC1347 - glutathione S-transferase, putative 1333 45.70 0 1435354..1436679 - 441 15641360 - VC1348 - response regulator 1334 46.25 0 1436615..1440610 + 1331 15641361 - VC1349 - sensory box sensor histidine kinase/response regulator 1335 46.62 0 1440716..1441189 - 157 15641362 - VC1350 - antioxidant, putative 1336 37.95 -2 1441403..1441597 - 64 15641363 - VC1351 - hypothetical protein 1337 43.01 -1 1441610..1441702 + 30 15641364 - VC1352 - hypothetical protein 1338 47.94 0 1441840..1444770 + 976 15641365 - VC1353 - GGDEF family protein 1339 46.30 0 1444812..1446068 - 418 15641366 - VC1354 - hypothetical protein 1340 44.21 0 1446242..1446526 + 94 15641367 - VC1355 - acylphosphatase 1341 45.15 0 1446592..1446921 - 109 15641368 - VC1356 - sulfite reductase, gamma subunit-related protein 1342 45.83 0 1446887..1447006 - 39 15641369 - VC1357 - hypothetical protein 1343 44.49 0 1447035..1447706 - 223 15641370 - VC1358 - hypothetical protein 1344 44.84 0 1447951..1448706 - 251 15641371 - VC1359 - amino acid ABC transporter, ATP-binding protein 1345 47.91 0 1448729..1449826 - 365 15641372 - VC1360 - amino acid ABC transporter, permease protein 1346 46.77 0 1449829..1451034 - 401 15641373 - VC1361 - amino acid ABC transporter, permease protein 1347 47.81 0 1451160..1452188 - 342 15641374 - VC1362 - amino acid ABC transporter, periplasmic amino acid-binding protein 1348 45.79 0 1452643..1453581 + 312 15641375 - VC1363 - siroheme synthase component enzyme 1349 47.81 0 1453647..1454468 - 273 15641376 - VC1364 - hypothetical protein 1350 47.97 0 1454744..1455481 + 245 15641377 - VC1365 - hypothetical protein 1351 48.71 0 1455494..1456189 + 231 15641378 - VC1366 - queuosine biosynthesis protein QueC 1352 45.41 0 1456161..1458164 - 667 15641379 - VC1367 - GGDEF family protein 1353 41.37 -1 1458335..1458583 + 82 15641380 - VC1368 - hypothetical protein 1354 45.82 0 1458740..1459756 + 338 15641381 - VC1369 - hypothetical protein 1355 44.29 0 1459753..1461084 + 443 15641382 - VC1370 - GGDEF family protein 1356 44.64 0 1461135..1461815 - 226 15641383 - VC1371 - hypothetical protein 1357 43.77 0 1462189..1463367 + 392 15641384 - VC1372 - GGDEF family protein 1358 51.56 0 1463479..1466325 - 948 15641385 - VC1373 - DnaK-related protein 1359 52.69 +1 1466367..1468262 - 631 15641386 - VC1374 - DnaK-related protein 1360 48.83 0 1468262..1468990 - 242 15641387 - VC1375 - hypothetical protein 1361 45.53 0 1469402..1470967 + 521 15641388 - VC1376 - GGDEF family protein 1362 47.46 0 1471032..1471562 + 176 15641389 - VC1377 - hypothetical protein 1363 42.08 -1 1471564..1471746 + 60 15641390 - VC1378 - hypothetical protein 1364 50.97 0 1471848..1472312 - 154 15641391 - VC1379 - hypothetical protein 1365 49.86 0 1472359..1472709 - 116 15641392 - VC1380 - hypothetical protein 1366 48.10 0 1472744..1472953 - 69 15641393 - VC1381 - hypothetical protein 1367 50.48 0 1472998..1476840 + 1280 161582005 - VC1382 - ATP-dependent RNA helicase HrpA 1368 44.70 0 1476818..1476949 - 43 15641395 - VC1383 - hypothetical protein 1369 48.45 0 1476980..1477462 + 160 15641396 - VC1384 - hypothetical protein 1370 48.65 0 1477495..1477605 - 36 15641397 - VC1385 - hypothetical protein 1371 52.77 +1 1477679..1479031 + 450 15641398 - VC1386 - putative chaperone 1372 44.44 0 1479065..1479163 + 32 15641399 - VC1387 - hypothetical protein 1373 50.93 0 1479156..1480172 + 338 15641400 lplA VC1388 - lipoate-protein ligase A 1374 47.78 0 1480408..1480587 + 59 15641401 - VC1389 - hypothetical protein 1375 52.79 +1 1480565..1481515 - 316 15641402 - VC1390 - LysR family transcriptional regulator 1376 52.45 +1 1481602..1483008 + 468 15641403 - VC1391 - multidrug transporter, putative 1377 53.40 +1 1483164..1484678 + 504 15641404 - VC1392 - deoxyribodipyrimidine photolyase, putative 1378 48.89 0 1484824..1485138 + 104 15641405 - VC1393 - sugE protein 1379 42.72 -1 1485193..1486428 - 411 15641406 - VC1394 - methyl-accepting chemotaxis protein 1380 42.53 -1 1486808..1487068 - 86 15641407 - VC1396 - hypothetical protein 1381 46.02 0 1487058..1489343 - 761 15641408 - VC1397 - chemotaxis protein CheA 1382 44.27 0 1489340..1489714 - 124 15641409 - VC1398 - chemotaxis protein CheY 1383 40.72 -1 1489689..1490555 - 288 15641410 - VC1399 - chemotaxis protein methyltransferase CheR 1384 45.21 0 1490566..1491222 - 218 15641411 - VC1400 - hypothetical protein 1385 48.75 0 1491209..1492285 - 358 15641412 - VC1401 - protein-glutamate methylesterase CheB 1386 44.47 0 1492306..1493868 - 520 15641413 - VC1402 - purine-binding chemotaxis protein Chew, putative 1387 44.81 0 1493881..1495806 - 641 15641414 - VC1403 - methyl-accepting chemotaxis protein 1388 27.64 -2 1495940..1496062 - 40 15641415 - VC1404 - hypothetical protein 1389 44.80 0 1496302..1498089 + 595 15641416 - VC1405 - methyl-accepting chemotaxis protein 1390 44.50 0 1498168..1499484 + 438 15641417 - VC1406 - methyl-accepting chemotaxis protein 1391 48.99 0 1499666..1500859 + 397 15641418 - VC1407 - ATP-dependent RNA helicase RhlE 1392 43.78 0 1500918..1501520 - 200 15641419 - VC1408 - TetR family transcriptional regulator 1393 48.87 0 1501627..1503081 + 484 15641420 - VC1409 - multidrug resistance protein, putative 1394 49.71 0 1503062..1504282 + 406 15641421 - VC1410 - multidrug resistance protein VceA 1395 46.81 0 1504292..1505827 + 511 15641422 - VC1411 - multidrug resistance protein VceB 1396 44.44 0 1505781..1505897 + 38 15641423 - VC1412 - hypothetical protein 1397 44.73 0 1505902..1507638 - 578 15641424 - VC1413 - methyl-accepting chemotaxis protein 1398 48.13 0 1507860..1509434 - 524 15641425 - VC1414 - thermostable carboxypeptidase 1 1399 49.52 0 1509632..1510150 + 172 15641426 - VC1415 - hcp protein 1400 49.48 0 1510278..1513769 + 1163 15641427 - VC1416 - vgrG protein 1401 42.86 -1 1513748..1514608 + 286 15641428 - VC1417 - hypothetical protein 1402 39.25 -1 1514611..1516536 + 641 15641429 - VC1418 - hypothetical protein 1403 34.68 -2 1516533..1517276 + 247 15641430 - VC1419 - hypothetical protein 1404 39.84 -1 1517421..1518158 + 245 15641431 - VC1420 - hypothetical protein 1405 44.60 0 1518246..1518884 + 212 15641432 - VC1421 - hypothetical protein 1406 49.89 0 1518957..1520333 - 458 15641433 - VC1422 - sodium/alanine symporter 1407 42.72 -1 1521011..1521745 + 244 15641434 - VC1423 - hypothetical protein 1408 44.99 0 1521892..1522929 - 345 15641435 - VC1424 - spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein 1409 44.96 0 1523041..1524141 - 366 15641436 - VC1425 - spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein 1410 45.01 0 1524175..1524945 - 256 15641437 potC VC1426 - spermidine/putrescine ABC transporter membrane protein 1411 44.83 0 1524945..1525805 - 286 15641438 potB VC1427 - spermidine/putrescine ABC transporter membrane protein 1412 44.89 0 1525786..1526919 - 377 15641439 potA VC1428 - putrescine/spermidine ABC transporter ATPase protein 1413 43.03 -1 1527205..1528050 + 281 15641440 - VC1429 - hypothetical protein 1414 43.66 0 1528040..1528843 + 267 15641441 - VC1430 - bax protein, putative 1415 44.09 0 1528845..1529504 + 219 15641442 - VC1431 - hypothetical protein 1416 44.37 0 1529581..1530513 - 310 15641443 - VC1432 - hypothetical protein 1417 46.52 0 1530639..1531586 - 315 15641444 - VC1433 - universal stress protein UspE 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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