version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1222 49.44 0 1310478..1310924 + 148 15641249 - VC1236 - PilB-related protein 1223 52.43 +1 1311451..1312560 + 369 15641250 cobT VC1237 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1224 50.00 0 1312560..1313345 + 261 15641251 cobS VC1238 - cobalamin synthase 1225 52.22 +1 1313354..1313893 + 179 15641252 cobU VC1239 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1226 52.07 +1 1313900..1314502 + 200 15641253 - VC1240 - alpha-ribazole-5`-phosphate phosphatase CobC, putative 1227 48.15 0 1314660..1314767 + 35 15641254 - VC1241 - hypothetical protein 1228 49.47 0 1314818..1315846 + 342 15641255 - VC1242 - succinylglutamate desuccinylase 1229 38.10 -2 1315816..1315962 - 48 15641256 - VC1243 - hypothetical protein 1230 52.68 +1 1315915..1316922 + 335 15641257 - VC1244 - vtamin B12-transporter permease 1231 50.66 0 1316909..1317664 + 251 15641258 - VC1245 - vitamin B12-transporter ATPase 1232 45.31 0 1318049..1318624 - 191 15641259 - VC1246 - hypothetical protein 1233 42.17 -1 1318803..1319198 - 131 15641260 - VC1247 - hypothetical protein 1234 50.40 0 1319246..1320856 - 536 15641261 - VC1248 - methyl-accepting chemotaxis protein 1235 47.17 0 1321087..1321599 - 170 15641262 - VC1249 - hypothetical protein 1236 46.11 0 1321865..1322764 - 299 15641263 - VC1250 - hypothetical protein 1237 35.35 -2 1322777..1322875 - 32 15641264 - VC1251 - hypothetical protein 1238 48.96 0 1322928..1324175 + 415 15641265 - VC1252 - competence damage protein CinA, putative 1239 48.02 0 1324348..1324776 - 142 15641266 - VC1253 - hypothetical protein 1240 45.52 0 1324877..1325155 - 92 15641267 - VC1254 - iron-sulfur cluster-binding protein, putative 1241 46.12 0 1325155..1326288 - 377 161582009 nrdB VC1255 - ribonucleotide-diphosphate reductase subunit beta 1242 48.78 0 1326384..1328669 - 761 15641269 - VC1256 - ribonucleotide-diphosphate reductase subunit alpha 1243 48.78 0 1329118..1329855 - 245 15641270 - VC1257 - 3-demethylubiquinone-9 3-methyltransferase 1244 51.17 0 1330207..1332891 + 894 15641271 - VC1258 - DNA gyrase, subunit A 1245 49.55 0 1333104..1334102 + 332 15641272 - VC1259 - hypothetical protein 1246 47.11 0 1334129..1335028 - 299 15641273 - VC1260 - AraC/XylS family transcriptional regulator 1247 48.56 0 1335279..1336493 + 404 15641274 - VC1261 - hypothetical protein 1248 46.89 0 1336676..1336852 + 58 15641275 - VC1262 - hypothetical protein 1249 45.47 0 1337023..1337673 + 216 15641276 ribA VC1263 - GTP cyclohydrolase II 1250 50.00 0 1337809..1339116 + 435 15641277 - VC1264 - iron-regulated protein A, putative 1251 52.38 +1 1339323..1340708 + 461 15641278 - VC1265 - hypothetical protein 1252 52.58 +1 1340718..1341725 + 335 15641279 - VC1266 - hypothetical protein 1253 53.00 +1 1341706..1342788 + 360 15641280 - VC1267 - hypothetical protein 1254 47.68 0 1343035..1344609 + 524 15641281 - VC1268 - hypothetical protein 1255 48.09 0 1344755..1345303 + 182 15641282 - VC1269 - hypothetical protein 1256 51.75 +1 1345367..1346023 + 218 15641283 - VC1270 - glyoxylase II family protein 1257 48.95 0 1346017..1346733 - 238 15641284 - VC1271 - hypothetical protein 1258 52.35 +1 1346837..1347262 + 141 15641285 - VC1272 - hypothetical protein 1259 48.92 0 1347537..1348742 + 401 15641286 - VC1273 - extracellular solute-binding protein 1260 45.88 0 1348844..1349377 + 177 15641287 - VC1274 - hypothetical protein 1261 50.08 0 1349387..1350670 + 427 15641288 - VC1275 - hypothetical protein 1262 46.61 0 1350777..1352132 + 451 15641289 - VC1276 - sensor histidine kinase 1263 47.31 0 1352113..1352763 + 216 15641290 - VC1277 - LuxR family transcriptional regulator 1264 50.00 0 1352765..1353244 - 159 15641291 - VC1278 - MarR family transcriptional regulator 1265 48.37 0 1353601..1355223 + 540 15641292 - VC1279 - BCCT family transporter 1266 44.91 0 1355388..1356683 - 431 15641293 - VC1280 - hypothetical protein 1267 40.85 -1 1356926..1357231 + 101 15641294 - VC1281 - PTS system, cellobiose-specific IIB component 1268 45.71 0 1357310..1358650 + 446 15641295 - VC1282 - PTS system, cellobiose-specific IIC component 1269 42.86 -1 1358697..1359032 + 111 15641296 - VC1283 - PTS system, cellobiose-specific IIA component 1270 46.41 0 1359014..1360336 + 440 15641297 - VC1284 - 6-phospho-beta-glucosidase 1271 44.93 0 1360359..1361117 + 252 15641298 - VC1285 - hypothetical protein 1272 48.97 0 1361218..1362240 + 340 15641299 - VC1286 - LacI family transcription regulator 1273 50.88 0 1362386..1364551 - 721 15641300 - VC1287 - glucosyltransferase MdoH 1274 48.35 0 1364570..1366207 - 545 15641301 mdoG VC1288 - glucan biosynthesis protein G 1275 48.84 0 1366600..1368495 + 631 15641302 - VC1289 - methyl-accepting chemotaxis protein 1276 50.35 0 1368634..1369344 - 236 15641303 - VC1290 - DNA polymerase III subunit epsilon 1277 47.65 0 1369341..1371254 - 637 15641304 - VC1291 - hypothetical protein 1278 45.10 0 1371469..1371570 + 33 15641305 - VC1292 - hypothetical protein 1279 48.45 0 1371535..1372725 - 396 161582008 - VC1293 - aromatic amino acid aminotransferase 1280 40.32 -1 1372937..1373122 - 61 15641307 - VC1294 - hypothetical protein 1281 48.34 0 1373094..1374572 - 492 15641308 - VC1295 - hypothetical protein 1282 49.23 0 1375081..1375929 + 282 15641309 - VC1296 - phosphomethylpyrimidine kinase 1283 49.75 0 1375995..1377395 - 466 161582007 asnC VC1297 - asparaginyl-tRNA synthetase 1284 46.26 0 1377542..1379173 - 543 15641311 - VC1298 - methyl-accepting chemotaxis protein 1285 44.44 0 1379571..1379939 + 122 15641312 - VC1299 - 6-pyruvoyl tetrahydrobiopterin synthase, putative 1286 49.63 0 1380028..1381389 - 453 15641313 - VC1300 - L-serine dehydratase 1 1287 47.05 0 1381482..1382735 - 417 15641314 - VC1301 - serine transporter 1288 46.18 0 1383034..1383648 - 204 15641315 - VC1302 - MutT/nudix family protein 1289 48.87 0 1383845..1385221 - 458 15641316 - VC1303 - para-aminobenzoate synthase component I 1290 51.12 0 1385397..1386914 + 505 15641317 - VC1304 - fumarate hydratase, class I, putative 1291 39.25 -1 1387063..1387248 + 61 15641318 - VC1305 - hypothetical protein 1292 51.46 0 1387473..1388846 + 457 15641319 - VC1306 - hypothetical protein 1293 48.83 0 1389975..1391516 + 513 15641320 - VC1308 - transcriptional regulator TyrR 1294 45.31 0 1391516..1392091 + 191 15641321 - VC1309 - ribosomal-protein-alanine acetyltransferase 1295 50.84 0 1392186..1392659 + 157 15641322 - VC1310 - hypothetical protein 1296 50.97 0 1392727..1393605 - 292 15641323 - VC1311 - hypothetical protein 1297 49.67 0 1393726..1394949 - 407 161582006 alr VC1312 - alanine racemase 1298 48.65 0 1395061..1396692 - 543 15641325 - VC1313 - methyl-accepting chemotaxis protein 1299 47.27 0 1397026..1398489 + 487 15641326 - VC1314 - transporter, putative 1300 49.78 0 1398499..1399848 + 449 15641327 - VC1315 - sensor histidine kinase 1301 48.85 0 1399817..1400293 + 158 15641328 - VC1316 - chemotaxis protein CheY, putative 1302 48.86 0 1400321..1401241 - 306 15641329 - VC1317 - hypothetical protein 1303 46.90 0 1401339..1402112 - 257 15641330 - VC1318 - outer membrane protein OmpV 1304 46.71 0 1402325..1403647 - 440 15641331 - VC1319 - sensor histidine kinase 1305 47.09 0 1403673..1404377 - 234 15641332 - VC1320 - DNA-binding response regulator 1306 48.54 0 1404753..1407824 + 1023 15641333 - VC1321 - hypothetical protein 1307 45.83 0 1407905..1408120 - 71 15641334 - VC1322 - hypothetical protein 1308 46.79 0 1408099..1408581 - 160 15641335 - VC1323 - hypothetical protein 1309 34.92 -2 1408946..1409134 - 62 15641336 - VC1324 - hypothetical protein 1310 50.15 0 1409080..1410054 + 324 15641337 - VC1325 - galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein 1311 38.46 -2 1410122..1410277 - 51 15641338 - VC1326 - hypothetical protein 1312 46.28 0 1410224..1411768 + 514 15641339 - VC1327 - galactose/methyl galaxtoside transporter ATP-binding protein 1313 47.63 0 1411773..1412786 + 337 15641340 mglC VC1328 - beta-methylgalactoside transporter inner membrane component 1314 38.03 -2 1413196..1413834 + 212 15641341 - VC1329 - opacity protein-related protein 1315 37.80 -2 1414155..1414982 + 275 15641342 - VC1330 - hypothetical protein 1316 41.09 -1 1414990..1415118 - 42 15641343 - VC1331 - hypothetical protein 1317 51.90 +1 1415133..1416662 - 509 15641344 - VC1332 - hypothetical protein 1318 48.55 0 1416672..1417223 - 183 15641345 - VC1333 - hypothetical protein 1319 52.57 +1 1417421..1418392 - 323 15641346 - VC1334 - hypothetical protein 1320 49.58 0 1419022..1419729 + 235 15641347 - VC1335 - GntR family transcriptional regulator 1321 52.32 +1 1419710..1420636 + 308 15641348 prpB VC1336 - 2-methylisocitrate lyase 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0