version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1185 48.29 0 1273414..1273881 + 155 15641212 - VC1199 - hypothetical protein 1186 44.80 0 1274131..1275342 + 403 15641213 - VC1200 - trypsin, putative 1187 48.07 0 1275417..1276142 - 241 15641214 - VC1201 - hypothetical protein 1188 53.32 +1 1276291..1277826 - 511 15641215 hutH VC1202 - histidine ammonia-lyase 1189 53.89 +1 1277838..1279535 - 565 15641216 - VC1203 - urocanate hydratase 1190 52.52 +1 1279554..1280564 - 336 15641217 - VC1204 - formimidoylglutamase 1191 53.02 +1 1280554..1281762 - 402 15641218 - VC1205 - imidazolonepropionase 1192 49.93 0 1281866..1282576 - 236 15641219 - VC1206 - histidine utilization repressor 1193 48.63 0 1282693..1283640 - 315 15641220 - VC1207 - hypothetical protein 1194 49.53 0 1283779..1284099 - 106 15641221 - VC1208 - dsDNA-mimic protein 1195 44.62 0 1284104..1284670 - 188 161582010 - VC1209 - elongation factor P 1196 49.81 0 1284862..1285656 + 264 15641223 - VC1210 - hypothetical protein 1197 45.25 0 1285750..1287864 + 704 15641224 - VC1211 - hypothetical protein 1198 48.18 0 1287836..1290199 - 787 15641225 - VC1212 - DNA polymerase II 1199 47.60 0 1290575..1291219 + 214 15641226 - VC1213 - response regulator 1200 49.21 0 1291219..1293051 + 610 15641227 uvrC VC1214 - excinuclease ABC subunit C 1201 47.31 0 1293099..1293656 + 185 15641228 - VC1215 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1202 47.54 0 1294549..1295667 + 372 15641229 - VC1216 - GGDEF family protein 1203 50.62 0 1295664..1296149 - 161 15641230 - VC1217 - hypothetical protein 1204 45.30 0 1296292..1296408 + 38 15641231 - VC1218 - hypothetical protein 1205 50.20 0 1296440..1297423 + 327 15641232 pheS VC1219 - phenylalanyl-tRNA synthetase subunit alpha 1206 52.18 +1 1297450..1299837 + 795 15641233 pheT VC1220 - phenylalanyl-tRNA synthetase subunit beta 1207 40.74 -1 1300120..1300254 + 44 15641234 - VC1221 - hypothetical protein 1208 47.14 0 1300276..1300572 + 98 15641235 ihfA VC1222 - integration host factor subunit alpha 1209 48.10 0 1300556..1300792 - 78 15641236 - VC1223 - hypothetical protein 1210 47.56 0 1300701..1301480 - 259 15641237 - VC1224 - hypothetical protein 1211 39.84 -1 1301552..1301797 + 81 15641238 - VC1225 - hypothetical protein 1212 49.62 0 1301949..1302605 + 218 15641239 - VC1226 - thiopurine S-methyltransferase 1213 43.27 0 1302558..1302728 - 56 15641240 - VC1227 - hypothetical protein 1214 51.69 +1 1302698..1303879 - 393 15641241 purT VC1228 - phosphoribosylglycinamide formyltransferase 2 1215 49.20 0 1304027..1304902 - 291 15641242 - VC1229 - hypothetical protein 1216 45.83 0 1304979..1305098 + 39 15641243 - VC1230 - hypothetical protein 1217 50.56 0 1305061..1305948 - 295 15641244 - VC1231 - cytidine deaminase 1218 51.41 0 1306118..1306792 - 224 15641245 - VC1232 - hypothetical protein 1219 47.44 0 1306783..1307172 - 129 15641246 - VC1233 - hypothetical protein 1220 50.81 0 1307189..1308613 - 474 15641247 sbcB VC1234 - exonuclease I 1221 50.42 0 1308759..1310174 - 471 15641248 - VC1235 - sodium/dicarboxylate symporter 1222 49.44 0 1310478..1310924 + 148 15641249 - VC1236 - PilB-related protein 1223 52.43 +1 1311451..1312560 + 369 15641250 cobT VC1237 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1224 50.00 0 1312560..1313345 + 261 15641251 cobS VC1238 - cobalamin synthase 1225 52.22 +1 1313354..1313893 + 179 15641252 cobU VC1239 - adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 1226 52.07 +1 1313900..1314502 + 200 15641253 - VC1240 - alpha-ribazole-5`-phosphate phosphatase CobC, putative 1227 48.15 0 1314660..1314767 + 35 15641254 - VC1241 - hypothetical protein 1228 49.47 0 1314818..1315846 + 342 15641255 - VC1242 - succinylglutamate desuccinylase 1229 38.10 -2 1315816..1315962 - 48 15641256 - VC1243 - hypothetical protein 1230 52.68 +1 1315915..1316922 + 335 15641257 - VC1244 - vtamin B12-transporter permease 1231 50.66 0 1316909..1317664 + 251 15641258 - VC1245 - vitamin B12-transporter ATPase 1232 45.31 0 1318049..1318624 - 191 15641259 - VC1246 - hypothetical protein 1233 42.17 -1 1318803..1319198 - 131 15641260 - VC1247 - hypothetical protein 1234 50.40 0 1319246..1320856 - 536 15641261 - VC1248 - methyl-accepting chemotaxis protein 1235 47.17 0 1321087..1321599 - 170 15641262 - VC1249 - hypothetical protein 1236 46.11 0 1321865..1322764 - 299 15641263 - VC1250 - hypothetical protein 1237 35.35 -2 1322777..1322875 - 32 15641264 - VC1251 - hypothetical protein 1238 48.96 0 1322928..1324175 + 415 15641265 - VC1252 - competence damage protein CinA, putative 1239 48.02 0 1324348..1324776 - 142 15641266 - VC1253 - hypothetical protein 1240 45.52 0 1324877..1325155 - 92 15641267 - VC1254 - iron-sulfur cluster-binding protein, putative 1241 46.12 0 1325155..1326288 - 377 161582009 nrdB VC1255 - ribonucleotide-diphosphate reductase subunit beta 1242 48.78 0 1326384..1328669 - 761 15641269 - VC1256 - ribonucleotide-diphosphate reductase subunit alpha 1243 48.78 0 1329118..1329855 - 245 15641270 - VC1257 - 3-demethylubiquinone-9 3-methyltransferase 1244 51.17 0 1330207..1332891 + 894 15641271 - VC1258 - DNA gyrase, subunit A 1245 49.55 0 1333104..1334102 + 332 15641272 - VC1259 - hypothetical protein 1246 47.11 0 1334129..1335028 - 299 15641273 - VC1260 - AraC/XylS family transcriptional regulator 1247 48.56 0 1335279..1336493 + 404 15641274 - VC1261 - hypothetical protein 1248 46.89 0 1336676..1336852 + 58 15641275 - VC1262 - hypothetical protein 1249 45.47 0 1337023..1337673 + 216 15641276 ribA VC1263 - GTP cyclohydrolase II 1250 50.00 0 1337809..1339116 + 435 15641277 - VC1264 - iron-regulated protein A, putative 1251 52.38 +1 1339323..1340708 + 461 15641278 - VC1265 - hypothetical protein 1252 52.58 +1 1340718..1341725 + 335 15641279 - VC1266 - hypothetical protein 1253 53.00 +1 1341706..1342788 + 360 15641280 - VC1267 - hypothetical protein 1254 47.68 0 1343035..1344609 + 524 15641281 - VC1268 - hypothetical protein 1255 48.09 0 1344755..1345303 + 182 15641282 - VC1269 - hypothetical protein 1256 51.75 +1 1345367..1346023 + 218 15641283 - VC1270 - glyoxylase II family protein 1257 48.95 0 1346017..1346733 - 238 15641284 - VC1271 - hypothetical protein 1258 52.35 +1 1346837..1347262 + 141 15641285 - VC1272 - hypothetical protein 1259 48.92 0 1347537..1348742 + 401 15641286 - VC1273 - extracellular solute-binding protein 1260 45.88 0 1348844..1349377 + 177 15641287 - VC1274 - hypothetical protein 1261 50.08 0 1349387..1350670 + 427 15641288 - VC1275 - hypothetical protein 1262 46.61 0 1350777..1352132 + 451 15641289 - VC1276 - sensor histidine kinase 1263 47.31 0 1352113..1352763 + 216 15641290 - VC1277 - LuxR family transcriptional regulator 1264 50.00 0 1352765..1353244 - 159 15641291 - VC1278 - MarR family transcriptional regulator 1265 48.37 0 1353601..1355223 + 540 15641292 - VC1279 - BCCT family transporter 1266 44.91 0 1355388..1356683 - 431 15641293 - VC1280 - hypothetical protein 1267 40.85 -1 1356926..1357231 + 101 15641294 - VC1281 - PTS system, cellobiose-specific IIB component 1268 45.71 0 1357310..1358650 + 446 15641295 - VC1282 - PTS system, cellobiose-specific IIC component 1269 42.86 -1 1358697..1359032 + 111 15641296 - VC1283 - PTS system, cellobiose-specific IIA component 1270 46.41 0 1359014..1360336 + 440 15641297 - VC1284 - 6-phospho-beta-glucosidase 1271 44.93 0 1360359..1361117 + 252 15641298 - VC1285 - hypothetical protein 1272 48.97 0 1361218..1362240 + 340 15641299 - VC1286 - LacI family transcription regulator 1273 50.88 0 1362386..1364551 - 721 15641300 - VC1287 - glucosyltransferase MdoH 1274 48.35 0 1364570..1366207 - 545 15641301 mdoG VC1288 - glucan biosynthesis protein G 1275 48.84 0 1366600..1368495 + 631 15641302 - VC1289 - methyl-accepting chemotaxis protein 1276 50.35 0 1368634..1369344 - 236 15641303 - VC1290 - DNA polymerase III subunit epsilon 1277 47.65 0 1369341..1371254 - 637 15641304 - VC1291 - hypothetical protein 1278 45.10 0 1371469..1371570 + 33 15641305 - VC1292 - hypothetical protein 1279 48.45 0 1371535..1372725 - 396 161582008 - VC1293 - aromatic amino acid aminotransferase 1280 40.32 -1 1372937..1373122 - 61 15641307 - VC1294 - hypothetical protein 1281 48.34 0 1373094..1374572 - 492 15641308 - VC1295 - hypothetical protein 1282 49.23 0 1375081..1375929 + 282 15641309 - VC1296 - phosphomethylpyrimidine kinase 1283 49.75 0 1375995..1377395 - 466 161582007 asnC VC1297 - asparaginyl-tRNA synthetase 1284 46.26 0 1377542..1379173 - 543 15641311 - VC1298 - methyl-accepting chemotaxis protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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