version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1111 45.45 0 1192749..1193276 + 175 15641138 - VC1125 - hypothetical protein 1112 49.53 0 1193367..1194737 - 456 15641139 - VC1126 - adenylosuccinate lyase 1113 50.00 0 1194795..1195412 - 205 15641140 - VC1127 - hypothetical protein 1114 47.63 0 1195435..1196553 - 372 15641141 trmU VC1128 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1115 42.91 -1 1196815..1198119 + 434 15641142 - VC1129 - inosine-guanosine kinase 1116 43.24 0 1198167..1198580 - 137 15641143 - VC1130 - DNA-binding protein H-NS 1117 48.00 0 1199268..1200869 + 533 15641144 - VC1131 - hypothetical protein 1118 49.18 0 1201260..1202174 + 304 15641145 hisG VC1132 - ATP phosphoribosyltransferase 1119 51.70 +1 1202179..1203474 + 431 15641146 hisD VC1133 - histidinol dehydrogenase 1120 49.38 0 1203478..1204518 + 346 15641147 - VC1134 - histidinol-phosphate aminotransferase 1121 49.81 0 1204570..1205643 + 357 15641148 - VC1135 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1122 50.65 0 1205643..1206254 + 203 15641149 hisH VC1136 - imidazole glycerol phosphate synthase subunit HisH 1123 50.14 0 1206297..1207034 + 245 15641150 - VC1137 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1124 51.03 0 1207016..1207789 + 257 15641151 - VC1138 - imidazole glycerol phosphate synthase subunit HisF 1125 49.76 0 1207786..1208418 + 210 15641152 - VC1139 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1126 47.65 0 1208619..1209491 - 290 15641153 - VC1140 - pseudouridine synthase family 1 protein 1127 49.15 0 1209652..1211877 + 741 15641154 - VC1141 - isocitrate dehydrogenase 1128 45.89 0 1211976..1212206 - 76 15641155 - VC1142 - cold shock-like protein CspD 1129 42.37 -1 1212670..1212990 + 106 15641156 clpS VC1143 - ATP-dependent Clp protease adaptor protein ClpS 1130 48.66 0 1213029..1215299 + 756 15641157 clpA VC1144 - ATP-dependent Clp protease ATP-binding subunit 1131 47.35 0 1215368..1217044 - 558 15641158 - VC1145 - hypothetical protein 1132 44.70 0 1217246..1217509 - 87 161582012 grxA VC1146 - glutaredoxin 1 1133 51.69 +1 1217797..1219065 + 422 15641160 - VC1147 - iron-containing alcohol dehydrogenase 1134 46.32 0 1219156..1220010 - 284 15641161 - VC1148 - DNA-binding transcriptional regulator HexR 1135 48.27 0 1220318..1221964 - 548 15641162 - VC1149 - glutamate decarboxylase, putative 1136 46.04 0 1222074..1222679 - 201 15641163 - VC1150 - hypothetical protein 1137 48.23 0 1222772..1223677 - 301 15641164 - VC1151 - hypothetical protein 1138 44.12 0 1223698..1224633 - 311 15641165 - VC1152 - hypothetical protein 1139 45.81 0 1224975..1225583 + 202 15641166 - VC1153 - hypothetical protein 1140 50.82 0 1225679..1226227 - 182 15641167 - VC1154 - hypothetical protein 1141 47.44 0 1226418..1226963 - 181 15641168 - VC1155 - response regulator 1142 46.53 0 1226912..1228207 - 431 15641169 - VC1156 - sensor histidine kinase 1143 46.17 0 1228096..1228866 - 256 15641170 - VC1157 - response regulator 1144 47.24 0 1229089..1230354 + 421 15641171 - VC1158 - hypothetical protein 1145 48.77 0 1230431..1231570 + 379 15641172 - VC1159 - phosphoserine aminotransferase 1146 51.11 0 1231651..1232640 - 329 15641173 - VC1160 - hypothetical protein 1147 49.11 0 1232640..1234148 - 502 15641174 - VC1161 - gonadoliberin III-related protein 1148 49.05 0 1234157..1234894 - 245 15641175 - VC1162 - hypothetical protein 1149 50.62 0 1235014..1235985 - 323 15641176 - VC1163 - hypothetical protein 1150 49.66 0 1236097..1236837 - 246 15641177 - VC1164 - hypothetical protein 1151 51.95 +1 1236963..1237832 - 289 15641178 - VC1165 - hypothetical protein 1152 50.17 0 1238124..1239899 + 591 15641179 aspS VC1166 - aspartyl-tRNA synthetase 1153 48.88 0 1239996..1240574 + 192 15641180 - VC1167 - thymidine kinase 1154 48.37 0 1240676..1242052 - 458 15641181 - VC1168 - proton/glutamate symporter 1155 51.55 0 1242248..1243054 - 268 15641182 trpA VC1169 - tryptophan synthase subunit alpha 1156 50.46 0 1243054..1244244 - 396 15641183 - VC1170 - tryptophan synthase subunit beta 1157 49.86 0 1244285..1245694 - 469 15641184 - VC1171 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1158 52.15 +1 1245700..1246698 - 332 161582011 trpD VC1172 - anthranilate phosphoribosyltransferase 1159 52.78 +1 1246719..1247330 - 203 15641186 - VC1173 - anthranilate synthase component II 1160 51.34 0 1247327..1248898 - 523 15641187 - VC1174 - anthranilate synthase component I 1161 43.01 -1 1248908..1249000 - 30 15641188 - VC1175 - hypothetical protein 1162 45.65 0 1249032..1249169 - 45 15641189 - VC1176 - hypothetical protein 1163 49.48 0 1249234..1250106 + 290 15641190 - VC1177 - hypothetical protein 1164 50.40 0 1250109..1250729 + 206 15641191 - VC1178 - hypothetical protein 1165 51.86 +1 1250862..1251827 + 321 15641192 - VC1179 - pseudouridine synthase family 1 protein 1166 51.80 +1 1251995..1253716 - 573 15641193 - VC1180 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1167 50.78 0 1253709..1255496 - 595 15641194 - VC1181 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1168 50.47 0 1255616..1256572 - 318 15641195 - VC1182 - thioredoxin reductase 1169 48.18 0 1257047..1257706 + 219 15641196 - VC1183 - hypothetical protein 1170 51.64 0 1257681..1258931 + 416 15641197 - VC1184 - NifS-related protein 1171 49.02 0 1259189..1260520 + 443 15641198 - VC1185 - GGDEF family protein 1172 48.50 0 1260621..1261385 - 254 15641199 - VC1186 - sanA protein 1173 47.97 0 1261358..1261726 - 122 15641200 - VC1187 - hypothetical protein 1174 50.37 0 1261730..1263496 - 588 15641201 - VC1188 - malate dehydrogenase 1175 44.68 0 1263812..1264234 + 140 15641202 - VC1189 - hypothetical protein 1176 46.88 0 1264436..1265653 - 405 15641203 hemH VC1190 - phosphoribosylaminoimidazole-succinocarboxamide synthase 1177 47.37 0 1265708..1266106 - 132 15641204 - VC1191 - hypothetical protein 1178 26.85 -2 1266153..1266260 + 35 15641205 - VC1192 - hypothetical protein 1179 40.91 -1 1266398..1266595 - 65 15641206 - VC1193 - hypothetical protein 1180 46.82 0 1266731..1267783 - 350 15641207 - VC1194 - hypothetical protein 1181 50.74 0 1267848..1268519 - 223 15641208 - VC1195 - putative lipoprotein 1182 44.78 0 1268619..1269308 - 229 15641209 - VC1196 - hypothetical protein 1183 44.40 0 1269433..1270128 - 231 15641210 - VC1197 - hypothetical protein 1184 48.92 0 1270299..1273364 + 1021 15641211 - VC1198 - hypothetical protein 1185 48.29 0 1273414..1273881 + 155 15641212 - VC1199 - hypothetical protein 1186 44.80 0 1274131..1275342 + 403 15641213 - VC1200 - trypsin, putative 1187 48.07 0 1275417..1276142 - 241 15641214 - VC1201 - hypothetical protein 1188 53.32 +1 1276291..1277826 - 511 15641215 hutH VC1202 - histidine ammonia-lyase 1189 53.89 +1 1277838..1279535 - 565 15641216 - VC1203 - urocanate hydratase 1190 52.52 +1 1279554..1280564 - 336 15641217 - VC1204 - formimidoylglutamase 1191 53.02 +1 1280554..1281762 - 402 15641218 - VC1205 - imidazolonepropionase 1192 49.93 0 1281866..1282576 - 236 15641219 - VC1206 - histidine utilization repressor 1193 48.63 0 1282693..1283640 - 315 15641220 - VC1207 - hypothetical protein 1194 49.53 0 1283779..1284099 - 106 15641221 - VC1208 - dsDNA-mimic protein 1195 44.62 0 1284104..1284670 - 188 161582010 - VC1209 - elongation factor P 1196 49.81 0 1284862..1285656 + 264 15641223 - VC1210 - hypothetical protein 1197 45.25 0 1285750..1287864 + 704 15641224 - VC1211 - hypothetical protein 1198 48.18 0 1287836..1290199 - 787 15641225 - VC1212 - DNA polymerase II 1199 47.60 0 1290575..1291219 + 214 15641226 - VC1213 - response regulator 1200 49.21 0 1291219..1293051 + 610 15641227 uvrC VC1214 - excinuclease ABC subunit C 1201 47.31 0 1293099..1293656 + 185 15641228 - VC1215 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1202 47.54 0 1294549..1295667 + 372 15641229 - VC1216 - GGDEF family protein 1203 50.62 0 1295664..1296149 - 161 15641230 - VC1217 - hypothetical protein 1204 45.30 0 1296292..1296408 + 38 15641231 - VC1218 - hypothetical protein 1205 50.20 0 1296440..1297423 + 327 15641232 pheS VC1219 - phenylalanyl-tRNA synthetase subunit alpha 1206 52.18 +1 1297450..1299837 + 795 15641233 pheT VC1220 - phenylalanyl-tRNA synthetase subunit beta 1207 40.74 -1 1300120..1300254 + 44 15641234 - VC1221 - hypothetical protein 1208 47.14 0 1300276..1300572 + 98 15641235 ihfA VC1222 - integration host factor subunit alpha 1209 48.10 0 1300556..1300792 - 78 15641236 - VC1223 - hypothetical protein 1210 47.56 0 1300701..1301480 - 259 15641237 - VC1224 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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