version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1071 46.59 0 1151321..1152625 + 434 15641098 - VC1085 - sensor histidine kinase 1072 44.75 0 1152625..1154235 + 536 15641099 - VC1086 - response regulator 1073 46.06 0 1154252..1155595 + 447 15641100 - VC1087 - response regulator 1074 45.42 0 1155624..1157228 - 534 15641101 - VC1088 - sensor histidine kinase 1075 46.86 0 1157232..1158044 - 270 15641102 - VC1089 - periplasmic binding protein-related protein 1076 34.72 -2 1158069..1158212 - 47 15641103 - VC1090 - hypothetical protein 1077 46.20 0 1158668..1160299 + 543 15641104 - VC1091 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1078 46.47 0 1160448..1161368 + 306 15641105 oppB VC1092 - oligopeptide transporter permease 1079 49.72 0 1161382..1162284 + 300 15641106 - VC1093 - oligopeptide ABC transporter, permease protein 1080 49.95 0 1162309..1163283 + 324 15641107 oppD VC1094 - oligopeptide transporter ATP-binding component 1081 48.27 0 1163262..1164272 + 336 15641108 - VC1095 - oligopeptide ABC transporter, ATP-binding protein 1082 47.26 0 1164422..1165369 + 315 15641109 - VC1096 - hypothetical protein 1083 51.79 +1 1165467..1167611 - 714 15641110 - VC1097 - phosphate acetyltransferase 1084 50.54 0 1167747..1168943 - 398 15641111 - VC1098 - acetate kinase 1085 49.89 0 1169290..1169748 + 152 15641112 - VC1099 - hypothetical protein 1086 44.53 0 1169871..1170281 - 136 15641113 - VC1100 - hypothetical protein 1087 48.55 0 1170719..1171684 + 321 15641114 - VC1101 - hypothetical protein 1088 50.30 0 1171760..1172743 + 327 15641115 - VC1102 - ABC transporter, permease protein, putative 1089 50.44 0 1172740..1173534 + 264 15641116 - VC1103 - ABC transporter, ATP-binding protein 1090 44.76 0 1173701..1175170 + 489 15641117 - VC1104 - GGDEF family protein 1091 50.93 0 1175203..1176174 - 323 15641118 - VC1105 - hypothetical protein 1092 50.63 0 1176331..1176960 + 209 15641119 - VC1106 - preprotein translocase SecA subunit-related protein 1093 47.07 0 1177056..1177652 + 198 15641120 lolA VC1107 - outer-membrane lipoprotein carrier protein 1094 52.44 +1 1177677..1179026 + 449 15641121 - VC1108 - recombination factor protein RarA 1095 44.79 0 1179026..1179121 + 31 15641122 - VC1109 - hypothetical protein 1096 49.46 0 1179130..1180437 + 435 15641123 - VC1110 - seryl-tRNA synthetase 1097 50.97 0 1180544..1181830 - 428 15641124 - VC1111 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1098 51.09 0 1181957..1183009 + 350 15641125 - VC1112 - biotin synthase 1099 52.47 +1 1182993..1184147 + 384 15641126 - VC1113 - 8-amino-7-oxononanoate synthase 1100 50.59 0 1184009..1184947 + 312 15641127 - VC1114 - biotin synthesis protein BioC 1101 47.98 0 1184923..1185639 + 238 15641128 bioD VC1115 - dithiobiotin synthetase 1102 43.33 0 1185721..1185930 - 69 15641129 - VC1116 - hypothetical protein 1103 49.42 0 1186157..1187020 + 287 15641130 - VC1117 - heat shock protein HtpX 1104 45.45 0 1187230..1187658 + 142 15641131 - VC1118 - transcriptional regulator, putative 1105 51.10 0 1187655..1188380 + 241 15641132 - VC1119 - short chain dehydrogenase 1106 48.71 0 1188391..1189671 + 426 15641133 - VC1120 - hypothetical protein 1107 48.27 0 1189671..1190480 + 269 15641134 - VC1121 - hypothetical protein 1108 47.27 0 1190413..1191711 + 432 15641135 - VC1122 - cyclopropane-fatty-acyl-phospholipid synthase 1109 48.89 0 1191714..1192253 + 179 15641136 - VC1123 - hypothetical protein 1110 50.97 0 1192186..1192752 + 188 15641137 - VC1124 - hypothetical protein 1111 45.45 0 1192749..1193276 + 175 15641138 - VC1125 - hypothetical protein 1112 49.53 0 1193367..1194737 - 456 15641139 - VC1126 - adenylosuccinate lyase 1113 50.00 0 1194795..1195412 - 205 15641140 - VC1127 - hypothetical protein 1114 47.63 0 1195435..1196553 - 372 15641141 trmU VC1128 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1115 42.91 -1 1196815..1198119 + 434 15641142 - VC1129 - inosine-guanosine kinase 1116 43.24 0 1198167..1198580 - 137 15641143 - VC1130 - DNA-binding protein H-NS 1117 48.00 0 1199268..1200869 + 533 15641144 - VC1131 - hypothetical protein 1118 49.18 0 1201260..1202174 + 304 15641145 hisG VC1132 - ATP phosphoribosyltransferase 1119 51.70 +1 1202179..1203474 + 431 15641146 hisD VC1133 - histidinol dehydrogenase 1120 49.38 0 1203478..1204518 + 346 15641147 - VC1134 - histidinol-phosphate aminotransferase 1121 49.81 0 1204570..1205643 + 357 15641148 - VC1135 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1122 50.65 0 1205643..1206254 + 203 15641149 hisH VC1136 - imidazole glycerol phosphate synthase subunit HisH 1123 50.14 0 1206297..1207034 + 245 15641150 - VC1137 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1124 51.03 0 1207016..1207789 + 257 15641151 - VC1138 - imidazole glycerol phosphate synthase subunit HisF 1125 49.76 0 1207786..1208418 + 210 15641152 - VC1139 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1126 47.65 0 1208619..1209491 - 290 15641153 - VC1140 - pseudouridine synthase family 1 protein 1127 49.15 0 1209652..1211877 + 741 15641154 - VC1141 - isocitrate dehydrogenase 1128 45.89 0 1211976..1212206 - 76 15641155 - VC1142 - cold shock-like protein CspD 1129 42.37 -1 1212670..1212990 + 106 15641156 clpS VC1143 - ATP-dependent Clp protease adaptor protein ClpS 1130 48.66 0 1213029..1215299 + 756 15641157 clpA VC1144 - ATP-dependent Clp protease ATP-binding subunit 1131 47.35 0 1215368..1217044 - 558 15641158 - VC1145 - hypothetical protein 1132 44.70 0 1217246..1217509 - 87 161582012 grxA VC1146 - glutaredoxin 1 1133 51.69 +1 1217797..1219065 + 422 15641160 - VC1147 - iron-containing alcohol dehydrogenase 1134 46.32 0 1219156..1220010 - 284 15641161 - VC1148 - DNA-binding transcriptional regulator HexR 1135 48.27 0 1220318..1221964 - 548 15641162 - VC1149 - glutamate decarboxylase, putative 1136 46.04 0 1222074..1222679 - 201 15641163 - VC1150 - hypothetical protein 1137 48.23 0 1222772..1223677 - 301 15641164 - VC1151 - hypothetical protein 1138 44.12 0 1223698..1224633 - 311 15641165 - VC1152 - hypothetical protein 1139 45.81 0 1224975..1225583 + 202 15641166 - VC1153 - hypothetical protein 1140 50.82 0 1225679..1226227 - 182 15641167 - VC1154 - hypothetical protein 1141 47.44 0 1226418..1226963 - 181 15641168 - VC1155 - response regulator 1142 46.53 0 1226912..1228207 - 431 15641169 - VC1156 - sensor histidine kinase 1143 46.17 0 1228096..1228866 - 256 15641170 - VC1157 - response regulator 1144 47.24 0 1229089..1230354 + 421 15641171 - VC1158 - hypothetical protein 1145 48.77 0 1230431..1231570 + 379 15641172 - VC1159 - phosphoserine aminotransferase 1146 51.11 0 1231651..1232640 - 329 15641173 - VC1160 - hypothetical protein 1147 49.11 0 1232640..1234148 - 502 15641174 - VC1161 - gonadoliberin III-related protein 1148 49.05 0 1234157..1234894 - 245 15641175 - VC1162 - hypothetical protein 1149 50.62 0 1235014..1235985 - 323 15641176 - VC1163 - hypothetical protein 1150 49.66 0 1236097..1236837 - 246 15641177 - VC1164 - hypothetical protein 1151 51.95 +1 1236963..1237832 - 289 15641178 - VC1165 - hypothetical protein 1152 50.17 0 1238124..1239899 + 591 15641179 aspS VC1166 - aspartyl-tRNA synthetase 1153 48.88 0 1239996..1240574 + 192 15641180 - VC1167 - thymidine kinase 1154 48.37 0 1240676..1242052 - 458 15641181 - VC1168 - proton/glutamate symporter 1155 51.55 0 1242248..1243054 - 268 15641182 trpA VC1169 - tryptophan synthase subunit alpha 1156 50.46 0 1243054..1244244 - 396 15641183 - VC1170 - tryptophan synthase subunit beta 1157 49.86 0 1244285..1245694 - 469 15641184 - VC1171 - bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1158 52.15 +1 1245700..1246698 - 332 161582011 trpD VC1172 - anthranilate phosphoribosyltransferase 1159 52.78 +1 1246719..1247330 - 203 15641186 - VC1173 - anthranilate synthase component II 1160 51.34 0 1247327..1248898 - 523 15641187 - VC1174 - anthranilate synthase component I 1161 43.01 -1 1248908..1249000 - 30 15641188 - VC1175 - hypothetical protein 1162 45.65 0 1249032..1249169 - 45 15641189 - VC1176 - hypothetical protein 1163 49.48 0 1249234..1250106 + 290 15641190 - VC1177 - hypothetical protein 1164 50.40 0 1250109..1250729 + 206 15641191 - VC1178 - hypothetical protein 1165 51.86 +1 1250862..1251827 + 321 15641192 - VC1179 - pseudouridine synthase family 1 protein 1166 51.80 +1 1251995..1253716 - 573 15641193 - VC1180 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1167 50.78 0 1253709..1255496 - 595 15641194 - VC1181 - cysteine/glutathione ABC transporter membrane/ATP-binding component 1168 50.47 0 1255616..1256572 - 318 15641195 - VC1182 - thioredoxin reductase 1169 48.18 0 1257047..1257706 + 219 15641196 - VC1183 - hypothetical protein 1170 51.64 0 1257681..1258931 + 416 15641197 - VC1184 - NifS-related protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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