version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1030 47.38 0 1113077..1113838 - 253 15641057 - VC1044 - hypothetical protein 1031 44.44 0 1113801..1114367 - 188 15641058 - VC1045 - RNA polymerase sigma factor 1032 49.21 0 1114748..1116202 + 484 15641059 fadI VC1046 - 3-ketoacyl-CoA thiolase 1033 49.74 0 1116202..1118328 + 708 161582013 fadJ VC1047 - multifunctional fatty acid oxidation complex subunit alpha 1034 50.82 0 1118454..1119002 + 182 15641061 - VC1048 - hypothetical protein 1035 47.00 0 1119081..1119980 - 299 15641062 - VC1049 - LysR family transcriptional regulator 1036 45.80 0 1120189..1121295 + 368 15641063 - VC1050 - response regulator 1037 43.94 0 1121465..1121596 + 43 15641064 - VC1051 - hypothetical protein 1038 45.61 0 1121596..1121994 + 132 15641065 - VC1052 - hypothetical protein 1039 48.90 0 1122126..1122671 + 181 15641066 - VC1053 - adenine phosphoribosyltransferase 1040 51.56 0 1122690..1124768 + 692 15641067 - VC1054 - DNA polymerase III subunits gamma and tau 1041 48.76 0 1124806..1125168 + 120 15641068 - VC1055 - hypothetical protein 1042 52.57 +1 1125183..1125785 + 200 15641069 recR VC1056 - recombination protein RecR 1043 50.79 0 1125895..1126146 - 83 15641070 - VC1057 - proteinase inhibitor, putative 1044 47.03 0 1126281..1126718 + 145 15641071 - VC1058 - hypothetical protein 1045 48.39 0 1126812..1127555 - 247 15641072 - VC1059 - short chain dehydrogenase 1046 49.02 0 1127705..1128775 + 356 15641073 - VC1060 - putative periplasmic protease 1047 50.00 0 1128900..1129967 - 355 15641074 - VC1061 - cysteine synthase/cystathionine beta-synthase family protein 1048 44.51 0 1130011..1130547 + 178 15641075 - VC1062 - AsnC family transcriptional regulator 1049 48.66 0 1130556..1131416 - 286 15641076 - VC1063 - acyl-CoA thioesterase II 1050 45.83 0 1131567..1131998 + 143 15641077 - VC1064 - lipoprotein-related protein 1051 48.84 0 1132052..1132354 - 100 15641078 - VC1065 - methylated-DNA--protein-cysteine methyltransferase-related protein 1052 48.92 0 1132405..1133148 + 247 15641079 - VC1066 - hypothetical protein 1053 45.24 0 1133235..1135316 + 693 15641080 - VC1067 - hypothetical protein 1054 51.75 +1 1135858..1136199 + 113 15641081 - VC1068 - ArsR family transcriptional regulator 1055 48.00 0 1136296..1137297 + 333 15641082 - VC1069 - glyceraldehyde-3-phosphate dehydrogenase 1056 54.22 +1 1137311..1137808 + 165 15641083 - VC1070 - phosphatase, putative 1057 50.73 0 1137847..1139082 + 411 15641084 - VC1071 - transporter, putative 1058 31.94 -2 1139201..1139344 + 47 15641085 - VC1072 - hypothetical protein 1059 50.81 0 1139646..1142912 + 1088 15641086 - VC1073 - chitinase, putative 1060 50.18 0 1143002..1143832 - 276 15641087 - VC1074 - hypothetical protein 1061 50.64 0 1144116..1144658 + 180 15641088 - VC1075 - hypothetical protein 1062 47.26 0 1144671..1145510 + 279 15641089 - VC1076 - AraC/XylS family transcriptional regulator 1063 45.40 0 1145507..1145995 - 162 15641090 - VC1077 - hypothetical protein 1064 41.84 -1 1146074..1146214 - 46 15641091 - VC1078 - hypothetical protein 1065 54.14 +1 1146259..1147248 - 329 15641092 - VC1079 - hypothetical protein 1066 47.54 0 1147494..1147859 + 121 15641093 - VC1080 - hypothetical protein 1067 46.37 0 1147856..1148998 + 380 15641094 - VC1081 - response regulator 1068 47.54 0 1149033..1149398 + 121 15641095 - VC1082 - response regulator 1069 44.27 0 1149395..1149979 + 194 15641096 - VC1083 - hypothetical protein 1070 45.00 0 1149990..1151309 + 439 15641097 - VC1084 - sensory box sensor histidine kinase 1071 46.59 0 1151321..1152625 + 434 15641098 - VC1085 - sensor histidine kinase 1072 44.75 0 1152625..1154235 + 536 15641099 - VC1086 - response regulator 1073 46.06 0 1154252..1155595 + 447 15641100 - VC1087 - response regulator 1074 45.42 0 1155624..1157228 - 534 15641101 - VC1088 - sensor histidine kinase 1075 46.86 0 1157232..1158044 - 270 15641102 - VC1089 - periplasmic binding protein-related protein 1076 34.72 -2 1158069..1158212 - 47 15641103 - VC1090 - hypothetical protein 1077 46.20 0 1158668..1160299 + 543 15641104 - VC1091 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1078 46.47 0 1160448..1161368 + 306 15641105 oppB VC1092 - oligopeptide transporter permease 1079 49.72 0 1161382..1162284 + 300 15641106 - VC1093 - oligopeptide ABC transporter, permease protein 1080 49.95 0 1162309..1163283 + 324 15641107 oppD VC1094 - oligopeptide transporter ATP-binding component 1081 48.27 0 1163262..1164272 + 336 15641108 - VC1095 - oligopeptide ABC transporter, ATP-binding protein 1082 47.26 0 1164422..1165369 + 315 15641109 - VC1096 - hypothetical protein 1083 51.79 +1 1165467..1167611 - 714 15641110 - VC1097 - phosphate acetyltransferase 1084 50.54 0 1167747..1168943 - 398 15641111 - VC1098 - acetate kinase 1085 49.89 0 1169290..1169748 + 152 15641112 - VC1099 - hypothetical protein 1086 44.53 0 1169871..1170281 - 136 15641113 - VC1100 - hypothetical protein 1087 48.55 0 1170719..1171684 + 321 15641114 - VC1101 - hypothetical protein 1088 50.30 0 1171760..1172743 + 327 15641115 - VC1102 - ABC transporter, permease protein, putative 1089 50.44 0 1172740..1173534 + 264 15641116 - VC1103 - ABC transporter, ATP-binding protein 1090 44.76 0 1173701..1175170 + 489 15641117 - VC1104 - GGDEF family protein 1091 50.93 0 1175203..1176174 - 323 15641118 - VC1105 - hypothetical protein 1092 50.63 0 1176331..1176960 + 209 15641119 - VC1106 - preprotein translocase SecA subunit-related protein 1093 47.07 0 1177056..1177652 + 198 15641120 lolA VC1107 - outer-membrane lipoprotein carrier protein 1094 52.44 +1 1177677..1179026 + 449 15641121 - VC1108 - recombination factor protein RarA 1095 44.79 0 1179026..1179121 + 31 15641122 - VC1109 - hypothetical protein 1096 49.46 0 1179130..1180437 + 435 15641123 - VC1110 - seryl-tRNA synthetase 1097 50.97 0 1180544..1181830 - 428 15641124 - VC1111 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1098 51.09 0 1181957..1183009 + 350 15641125 - VC1112 - biotin synthase 1099 52.47 +1 1182993..1184147 + 384 15641126 - VC1113 - 8-amino-7-oxononanoate synthase 1100 50.59 0 1184009..1184947 + 312 15641127 - VC1114 - biotin synthesis protein BioC 1101 47.98 0 1184923..1185639 + 238 15641128 bioD VC1115 - dithiobiotin synthetase 1102 43.33 0 1185721..1185930 - 69 15641129 - VC1116 - hypothetical protein 1103 49.42 0 1186157..1187020 + 287 15641130 - VC1117 - heat shock protein HtpX 1104 45.45 0 1187230..1187658 + 142 15641131 - VC1118 - transcriptional regulator, putative 1105 51.10 0 1187655..1188380 + 241 15641132 - VC1119 - short chain dehydrogenase 1106 48.71 0 1188391..1189671 + 426 15641133 - VC1120 - hypothetical protein 1107 48.27 0 1189671..1190480 + 269 15641134 - VC1121 - hypothetical protein 1108 47.27 0 1190413..1191711 + 432 15641135 - VC1122 - cyclopropane-fatty-acyl-phospholipid synthase 1109 48.89 0 1191714..1192253 + 179 15641136 - VC1123 - hypothetical protein 1110 50.97 0 1192186..1192752 + 188 15641137 - VC1124 - hypothetical protein 1111 45.45 0 1192749..1193276 + 175 15641138 - VC1125 - hypothetical protein 1112 49.53 0 1193367..1194737 - 456 15641139 - VC1126 - adenylosuccinate lyase 1113 50.00 0 1194795..1195412 - 205 15641140 - VC1127 - hypothetical protein 1114 47.63 0 1195435..1196553 - 372 15641141 trmU VC1128 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1115 42.91 -1 1196815..1198119 + 434 15641142 - VC1129 - inosine-guanosine kinase 1116 43.24 0 1198167..1198580 - 137 15641143 - VC1130 - DNA-binding protein H-NS 1117 48.00 0 1199268..1200869 + 533 15641144 - VC1131 - hypothetical protein 1118 49.18 0 1201260..1202174 + 304 15641145 hisG VC1132 - ATP phosphoribosyltransferase 1119 51.70 +1 1202179..1203474 + 431 15641146 hisD VC1133 - histidinol dehydrogenase 1120 49.38 0 1203478..1204518 + 346 15641147 - VC1134 - histidinol-phosphate aminotransferase 1121 49.81 0 1204570..1205643 + 357 15641148 - VC1135 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 1122 50.65 0 1205643..1206254 + 203 15641149 hisH VC1136 - imidazole glycerol phosphate synthase subunit HisH 1123 50.14 0 1206297..1207034 + 245 15641150 - VC1137 - 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 1124 51.03 0 1207016..1207789 + 257 15641151 - VC1138 - imidazole glycerol phosphate synthase subunit HisF 1125 49.76 0 1207786..1208418 + 210 15641152 - VC1139 - bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 1126 47.65 0 1208619..1209491 - 290 15641153 - VC1140 - pseudouridine synthase family 1 protein 1127 49.15 0 1209652..1211877 + 741 15641154 - VC1141 - isocitrate dehydrogenase 1128 45.89 0 1211976..1212206 - 76 15641155 - VC1142 - cold shock-like protein CspD 1129 42.37 -1 1212670..1212990 + 106 15641156 clpS VC1143 - ATP-dependent Clp protease adaptor protein ClpS 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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