version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1007 49.85 0 1090250..1091617 + 455 15641034 - VC1021 - LuxO repressor protein 1008 46.49 0 1091621..1091962 + 113 15641035 - VC1022 - phosphorelay protein 1009 51.18 0 1091951..1092841 - 296 15641036 - VC1023 - hypothetical protein 1010 47.76 0 1093132..1094136 + 334 15641037 moaA VC1024 - molybdenum cofactor biosynthesis protein A 1011 49.71 0 1094196..1094708 + 170 15641038 - VC1025 - molybdenum cofactor biosynthesis protein B 1012 51.55 0 1094716..1095198 + 160 15641039 moaC VC1026 - molybdenum cofactor biosynthesis protein C 1013 50.41 0 1095195..1095440 + 81 15641040 moaD VC1027 - molybdopterin synthase small subunit 1014 52.32 +1 1095442..1095894 + 150 15641041 - VC1028 - molybdenum cofactor biosynthesis protein E 1015 47.59 0 1095909..1096883 - 324 15641042 - VC1029 - GGDEF family protein 1016 40.86 -1 1096938..1097030 - 30 15641043 - VC1030 - hypothetical protein 1017 48.30 0 1097088..1097528 + 146 15641044 - VC1031 - inosine monophosphate dehydrogenase-related protein 1018 43.43 0 1097461..1097658 - 65 15641045 - VC1032 - hypothetical protein 1019 53.62 +1 1097641..1099947 + 768 15641046 zntA VC1033 - zinc/cadmium/mercury/lead-transporting ATPase 1020 52.51 +1 1100393..1101169 + 258 15641047 - VC1034 - uridine phosphorylase 1021 46.42 0 1101242..1102135 - 297 15641048 - VC1035 - hypothetical protein 1022 49.03 0 1102361..1104412 - 683 161582014 metG VC1036 - methionyl-tRNA synthetase 1023 51.78 +1 1104498..1105646 + 382 15641050 - VC1037 - mrp protein 1024 48.94 0 1105805..1106464 + 219 15641051 - VC1038 - uridine kinase 1025 47.63 0 1106562..1108673 + 703 15641052 - VC1039 - asmA protein 1026 49.34 0 1108745..1109350 - 201 15641053 - VC1040 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1027 49.15 0 1109436..1109903 + 155 15641054 - VC1041 - phosphotyrosine protein phosphatase 1028 47.81 0 1109930..1111228 - 432 15641055 - VC1042 - long-chain fatty acid transport protein 1029 45.69 0 1111531..1112817 - 428 15641056 - VC1043 - long-chain fatty acid transport protein 1030 47.38 0 1113077..1113838 - 253 15641057 - VC1044 - hypothetical protein 1031 44.44 0 1113801..1114367 - 188 15641058 - VC1045 - RNA polymerase sigma factor 1032 49.21 0 1114748..1116202 + 484 15641059 fadI VC1046 - 3-ketoacyl-CoA thiolase 1033 49.74 0 1116202..1118328 + 708 161582013 fadJ VC1047 - multifunctional fatty acid oxidation complex subunit alpha 1034 50.82 0 1118454..1119002 + 182 15641061 - VC1048 - hypothetical protein 1035 47.00 0 1119081..1119980 - 299 15641062 - VC1049 - LysR family transcriptional regulator 1036 45.80 0 1120189..1121295 + 368 15641063 - VC1050 - response regulator 1037 43.94 0 1121465..1121596 + 43 15641064 - VC1051 - hypothetical protein 1038 45.61 0 1121596..1121994 + 132 15641065 - VC1052 - hypothetical protein 1039 48.90 0 1122126..1122671 + 181 15641066 - VC1053 - adenine phosphoribosyltransferase 1040 51.56 0 1122690..1124768 + 692 15641067 - VC1054 - DNA polymerase III subunits gamma and tau 1041 48.76 0 1124806..1125168 + 120 15641068 - VC1055 - hypothetical protein 1042 52.57 +1 1125183..1125785 + 200 15641069 recR VC1056 - recombination protein RecR 1043 50.79 0 1125895..1126146 - 83 15641070 - VC1057 - proteinase inhibitor, putative 1044 47.03 0 1126281..1126718 + 145 15641071 - VC1058 - hypothetical protein 1045 48.39 0 1126812..1127555 - 247 15641072 - VC1059 - short chain dehydrogenase 1046 49.02 0 1127705..1128775 + 356 15641073 - VC1060 - putative periplasmic protease 1047 50.00 0 1128900..1129967 - 355 15641074 - VC1061 - cysteine synthase/cystathionine beta-synthase family protein 1048 44.51 0 1130011..1130547 + 178 15641075 - VC1062 - AsnC family transcriptional regulator 1049 48.66 0 1130556..1131416 - 286 15641076 - VC1063 - acyl-CoA thioesterase II 1050 45.83 0 1131567..1131998 + 143 15641077 - VC1064 - lipoprotein-related protein 1051 48.84 0 1132052..1132354 - 100 15641078 - VC1065 - methylated-DNA--protein-cysteine methyltransferase-related protein 1052 48.92 0 1132405..1133148 + 247 15641079 - VC1066 - hypothetical protein 1053 45.24 0 1133235..1135316 + 693 15641080 - VC1067 - hypothetical protein 1054 51.75 +1 1135858..1136199 + 113 15641081 - VC1068 - ArsR family transcriptional regulator 1055 48.00 0 1136296..1137297 + 333 15641082 - VC1069 - glyceraldehyde-3-phosphate dehydrogenase 1056 54.22 +1 1137311..1137808 + 165 15641083 - VC1070 - phosphatase, putative 1057 50.73 0 1137847..1139082 + 411 15641084 - VC1071 - transporter, putative 1058 31.94 -2 1139201..1139344 + 47 15641085 - VC1072 - hypothetical protein 1059 50.81 0 1139646..1142912 + 1088 15641086 - VC1073 - chitinase, putative 1060 50.18 0 1143002..1143832 - 276 15641087 - VC1074 - hypothetical protein 1061 50.64 0 1144116..1144658 + 180 15641088 - VC1075 - hypothetical protein 1062 47.26 0 1144671..1145510 + 279 15641089 - VC1076 - AraC/XylS family transcriptional regulator 1063 45.40 0 1145507..1145995 - 162 15641090 - VC1077 - hypothetical protein 1064 41.84 -1 1146074..1146214 - 46 15641091 - VC1078 - hypothetical protein 1065 54.14 +1 1146259..1147248 - 329 15641092 - VC1079 - hypothetical protein 1066 47.54 0 1147494..1147859 + 121 15641093 - VC1080 - hypothetical protein 1067 46.37 0 1147856..1148998 + 380 15641094 - VC1081 - response regulator 1068 47.54 0 1149033..1149398 + 121 15641095 - VC1082 - response regulator 1069 44.27 0 1149395..1149979 + 194 15641096 - VC1083 - hypothetical protein 1070 45.00 0 1149990..1151309 + 439 15641097 - VC1084 - sensory box sensor histidine kinase 1071 46.59 0 1151321..1152625 + 434 15641098 - VC1085 - sensor histidine kinase 1072 44.75 0 1152625..1154235 + 536 15641099 - VC1086 - response regulator 1073 46.06 0 1154252..1155595 + 447 15641100 - VC1087 - response regulator 1074 45.42 0 1155624..1157228 - 534 15641101 - VC1088 - sensor histidine kinase 1075 46.86 0 1157232..1158044 - 270 15641102 - VC1089 - periplasmic binding protein-related protein 1076 34.72 -2 1158069..1158212 - 47 15641103 - VC1090 - hypothetical protein 1077 46.20 0 1158668..1160299 + 543 15641104 - VC1091 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1078 46.47 0 1160448..1161368 + 306 15641105 oppB VC1092 - oligopeptide transporter permease 1079 49.72 0 1161382..1162284 + 300 15641106 - VC1093 - oligopeptide ABC transporter, permease protein 1080 49.95 0 1162309..1163283 + 324 15641107 oppD VC1094 - oligopeptide transporter ATP-binding component 1081 48.27 0 1163262..1164272 + 336 15641108 - VC1095 - oligopeptide ABC transporter, ATP-binding protein 1082 47.26 0 1164422..1165369 + 315 15641109 - VC1096 - hypothetical protein 1083 51.79 +1 1165467..1167611 - 714 15641110 - VC1097 - phosphate acetyltransferase 1084 50.54 0 1167747..1168943 - 398 15641111 - VC1098 - acetate kinase 1085 49.89 0 1169290..1169748 + 152 15641112 - VC1099 - hypothetical protein 1086 44.53 0 1169871..1170281 - 136 15641113 - VC1100 - hypothetical protein 1087 48.55 0 1170719..1171684 + 321 15641114 - VC1101 - hypothetical protein 1088 50.30 0 1171760..1172743 + 327 15641115 - VC1102 - ABC transporter, permease protein, putative 1089 50.44 0 1172740..1173534 + 264 15641116 - VC1103 - ABC transporter, ATP-binding protein 1090 44.76 0 1173701..1175170 + 489 15641117 - VC1104 - GGDEF family protein 1091 50.93 0 1175203..1176174 - 323 15641118 - VC1105 - hypothetical protein 1092 50.63 0 1176331..1176960 + 209 15641119 - VC1106 - preprotein translocase SecA subunit-related protein 1093 47.07 0 1177056..1177652 + 198 15641120 lolA VC1107 - outer-membrane lipoprotein carrier protein 1094 52.44 +1 1177677..1179026 + 449 15641121 - VC1108 - recombination factor protein RarA 1095 44.79 0 1179026..1179121 + 31 15641122 - VC1109 - hypothetical protein 1096 49.46 0 1179130..1180437 + 435 15641123 - VC1110 - seryl-tRNA synthetase 1097 50.97 0 1180544..1181830 - 428 15641124 - VC1111 - adenosylmethionine--8-amino-7-oxononanoate transaminase 1098 51.09 0 1181957..1183009 + 350 15641125 - VC1112 - biotin synthase 1099 52.47 +1 1182993..1184147 + 384 15641126 - VC1113 - 8-amino-7-oxononanoate synthase 1100 50.59 0 1184009..1184947 + 312 15641127 - VC1114 - biotin synthesis protein BioC 1101 47.98 0 1184923..1185639 + 238 15641128 bioD VC1115 - dithiobiotin synthetase 1102 43.33 0 1185721..1185930 - 69 15641129 - VC1116 - hypothetical protein 1103 49.42 0 1186157..1187020 + 287 15641130 - VC1117 - heat shock protein HtpX 1104 45.45 0 1187230..1187658 + 142 15641131 - VC1118 - transcriptional regulator, putative 1105 51.10 0 1187655..1188380 + 241 15641132 - VC1119 - short chain dehydrogenase 1106 48.71 0 1188391..1189671 + 426 15641133 - VC1120 - hypothetical protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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