version 1.0
Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete sequence - 1..2961149 2742 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 980 46.91 0 1058502..1059716 - 404 15641008 - VC0993 - N-acetylglucosamine repressor 981 45.82 0 1059719..1060855 - 378 15641009 nagA VC0994 - N-acetylglucosamine-6-phosphate deacetylase 982 48.98 0 1061324..1062895 + 523 15641010 - VC0995 - PTS system, N-acetylglucosamine-specific IIABC component 983 40.20 -1 1063024..1063125 + 33 15641011 - VC0996 - hypothetical protein 984 46.56 0 1063143..1064813 + 556 15641012 - VC0997 - glutaminyl-tRNA synthetase 985 49.49 0 1064978..1069843 + 1621 15641013 - VC0998 - hypothetical protein 986 50.82 0 1069965..1070759 + 264 15641014 truA VC0999 - tRNA pseudouridine synthase A 987 49.84 0 1070933..1071859 + 308 15641015 - VC1000 - acetyl-CoA carboxylase subunit beta 988 50.95 0 1071904..1073169 + 421 15641016 - VC1001 - folylpolyglutamate synthase/dihydrofolate synthase 989 47.07 0 1073170..1073766 + 198 15641017 - VC1002 - dedD protein 990 46.75 0 1073829..1074320 + 163 15641018 - VC1003 - bacteriocin production protein 991 48.65 0 1074353..1075867 + 504 15641019 - VC1004 - amidophosphoribosyltransferase 992 51.13 0 1075995..1077320 - 441 15641020 - VC1005 - hypothetical protein 993 46.58 0 1077421..1078152 - 243 15641021 - VC1006 - ribonuclease T 994 43.06 -1 1078165..1078308 - 47 15641022 - VC1007 - hypothetical protein 995 48.14 0 1078369..1079253 + 294 15641023 - VC1008 - sodium-type flagellar protein MotY 996 48.07 0 1079302..1079742 - 146 15641024 - VC1009 - hypothetical protein 997 46.85 0 1079901..1080455 - 184 15641025 - VC1010 - lactoylglutathione lyase 998 47.35 0 1080358..1080999 - 213 15641026 - VC1011 - endonuclease III 999 51.37 0 1081026..1081718 - 230 15641027 - VC1012 - SoxR-reducing system protein RsxE 1000 48.73 0 1081720..1082349 - 209 15641028 - VC1013 - electron transport complex protein RnfG 1001 53.39 +1 1082361..1083407 - 348 15641029 rnfD VC1014 - electron transport complex protein RnfD 1002 52.91 +1 1083407..1085812 - 801 15641030 - VC1015 - electron transport complex protein RnfC 1003 52.21 +1 1085740..1086327 - 195 15641031 - VC1016 - electron transport complex protein RnfB 1004 48.28 0 1086327..1086908 - 193 161582015 - VC1017 - Na(+)-translocating NADH-quinone reductase subunit E 1005 48.08 0 1087790..1089819 + 676 15642773 uvrB VC1018 - excinuclease ABC subunit B 1006 41.29 -1 1089757..1089957 - 66 15641033 - VC1020 - hypothetical protein 1007 49.85 0 1090250..1091617 + 455 15641034 - VC1021 - LuxO repressor protein 1008 46.49 0 1091621..1091962 + 113 15641035 - VC1022 - phosphorelay protein 1009 51.18 0 1091951..1092841 - 296 15641036 - VC1023 - hypothetical protein 1010 47.76 0 1093132..1094136 + 334 15641037 moaA VC1024 - molybdenum cofactor biosynthesis protein A 1011 49.71 0 1094196..1094708 + 170 15641038 - VC1025 - molybdenum cofactor biosynthesis protein B 1012 51.55 0 1094716..1095198 + 160 15641039 moaC VC1026 - molybdenum cofactor biosynthesis protein C 1013 50.41 0 1095195..1095440 + 81 15641040 moaD VC1027 - molybdopterin synthase small subunit 1014 52.32 +1 1095442..1095894 + 150 15641041 - VC1028 - molybdenum cofactor biosynthesis protein E 1015 47.59 0 1095909..1096883 - 324 15641042 - VC1029 - GGDEF family protein 1016 40.86 -1 1096938..1097030 - 30 15641043 - VC1030 - hypothetical protein 1017 48.30 0 1097088..1097528 + 146 15641044 - VC1031 - inosine monophosphate dehydrogenase-related protein 1018 43.43 0 1097461..1097658 - 65 15641045 - VC1032 - hypothetical protein 1019 53.62 +1 1097641..1099947 + 768 15641046 zntA VC1033 - zinc/cadmium/mercury/lead-transporting ATPase 1020 52.51 +1 1100393..1101169 + 258 15641047 - VC1034 - uridine phosphorylase 1021 46.42 0 1101242..1102135 - 297 15641048 - VC1035 - hypothetical protein 1022 49.03 0 1102361..1104412 - 683 161582014 metG VC1036 - methionyl-tRNA synthetase 1023 51.78 +1 1104498..1105646 + 382 15641050 - VC1037 - mrp protein 1024 48.94 0 1105805..1106464 + 219 15641051 - VC1038 - uridine kinase 1025 47.63 0 1106562..1108673 + 703 15641052 - VC1039 - asmA protein 1026 49.34 0 1108745..1109350 - 201 15641053 - VC1040 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1027 49.15 0 1109436..1109903 + 155 15641054 - VC1041 - phosphotyrosine protein phosphatase 1028 47.81 0 1109930..1111228 - 432 15641055 - VC1042 - long-chain fatty acid transport protein 1029 45.69 0 1111531..1112817 - 428 15641056 - VC1043 - long-chain fatty acid transport protein 1030 47.38 0 1113077..1113838 - 253 15641057 - VC1044 - hypothetical protein 1031 44.44 0 1113801..1114367 - 188 15641058 - VC1045 - RNA polymerase sigma factor 1032 49.21 0 1114748..1116202 + 484 15641059 fadI VC1046 - 3-ketoacyl-CoA thiolase 1033 49.74 0 1116202..1118328 + 708 161582013 fadJ VC1047 - multifunctional fatty acid oxidation complex subunit alpha 1034 50.82 0 1118454..1119002 + 182 15641061 - VC1048 - hypothetical protein 1035 47.00 0 1119081..1119980 - 299 15641062 - VC1049 - LysR family transcriptional regulator 1036 45.80 0 1120189..1121295 + 368 15641063 - VC1050 - response regulator 1037 43.94 0 1121465..1121596 + 43 15641064 - VC1051 - hypothetical protein 1038 45.61 0 1121596..1121994 + 132 15641065 - VC1052 - hypothetical protein 1039 48.90 0 1122126..1122671 + 181 15641066 - VC1053 - adenine phosphoribosyltransferase 1040 51.56 0 1122690..1124768 + 692 15641067 - VC1054 - DNA polymerase III subunits gamma and tau 1041 48.76 0 1124806..1125168 + 120 15641068 - VC1055 - hypothetical protein 1042 52.57 +1 1125183..1125785 + 200 15641069 recR VC1056 - recombination protein RecR 1043 50.79 0 1125895..1126146 - 83 15641070 - VC1057 - proteinase inhibitor, putative 1044 47.03 0 1126281..1126718 + 145 15641071 - VC1058 - hypothetical protein 1045 48.39 0 1126812..1127555 - 247 15641072 - VC1059 - short chain dehydrogenase 1046 49.02 0 1127705..1128775 + 356 15641073 - VC1060 - putative periplasmic protease 1047 50.00 0 1128900..1129967 - 355 15641074 - VC1061 - cysteine synthase/cystathionine beta-synthase family protein 1048 44.51 0 1130011..1130547 + 178 15641075 - VC1062 - AsnC family transcriptional regulator 1049 48.66 0 1130556..1131416 - 286 15641076 - VC1063 - acyl-CoA thioesterase II 1050 45.83 0 1131567..1131998 + 143 15641077 - VC1064 - lipoprotein-related protein 1051 48.84 0 1132052..1132354 - 100 15641078 - VC1065 - methylated-DNA--protein-cysteine methyltransferase-related protein 1052 48.92 0 1132405..1133148 + 247 15641079 - VC1066 - hypothetical protein 1053 45.24 0 1133235..1135316 + 693 15641080 - VC1067 - hypothetical protein 1054 51.75 +1 1135858..1136199 + 113 15641081 - VC1068 - ArsR family transcriptional regulator 1055 48.00 0 1136296..1137297 + 333 15641082 - VC1069 - glyceraldehyde-3-phosphate dehydrogenase 1056 54.22 +1 1137311..1137808 + 165 15641083 - VC1070 - phosphatase, putative 1057 50.73 0 1137847..1139082 + 411 15641084 - VC1071 - transporter, putative 1058 31.94 -2 1139201..1139344 + 47 15641085 - VC1072 - hypothetical protein 1059 50.81 0 1139646..1142912 + 1088 15641086 - VC1073 - chitinase, putative 1060 50.18 0 1143002..1143832 - 276 15641087 - VC1074 - hypothetical protein 1061 50.64 0 1144116..1144658 + 180 15641088 - VC1075 - hypothetical protein 1062 47.26 0 1144671..1145510 + 279 15641089 - VC1076 - AraC/XylS family transcriptional regulator 1063 45.40 0 1145507..1145995 - 162 15641090 - VC1077 - hypothetical protein 1064 41.84 -1 1146074..1146214 - 46 15641091 - VC1078 - hypothetical protein 1065 54.14 +1 1146259..1147248 - 329 15641092 - VC1079 - hypothetical protein 1066 47.54 0 1147494..1147859 + 121 15641093 - VC1080 - hypothetical protein 1067 46.37 0 1147856..1148998 + 380 15641094 - VC1081 - response regulator 1068 47.54 0 1149033..1149398 + 121 15641095 - VC1082 - response regulator 1069 44.27 0 1149395..1149979 + 194 15641096 - VC1083 - hypothetical protein 1070 45.00 0 1149990..1151309 + 439 15641097 - VC1084 - sensory box sensor histidine kinase 1071 46.59 0 1151321..1152625 + 434 15641098 - VC1085 - sensor histidine kinase 1072 44.75 0 1152625..1154235 + 536 15641099 - VC1086 - response regulator 1073 46.06 0 1154252..1155595 + 447 15641100 - VC1087 - response regulator 1074 45.42 0 1155624..1157228 - 534 15641101 - VC1088 - sensor histidine kinase 1075 46.86 0 1157232..1158044 - 270 15641102 - VC1089 - periplasmic binding protein-related protein 1076 34.72 -2 1158069..1158212 - 47 15641103 - VC1090 - hypothetical protein 1077 46.20 0 1158668..1160299 + 543 15641104 - VC1091 - oligopeptide ABC transporter, periplasmic oligopeptide-binding protein 1078 46.47 0 1160448..1161368 + 306 15641105 oppB VC1092 - oligopeptide transporter permease 1079 49.72 0 1161382..1162284 + 300 15641106 - VC1093 - oligopeptide ABC transporter, permease protein 47.43 MEAN 4.26 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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