version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 867 42.15 -2 958649..959374 - 241 189026103 - TPASS_0880 - possible membrane spanning protein 868 46.84 -1 959364..960170 - 268 189026104 natA TPASS_0881 - ABC transporter, ATP-binding protein 869 42.91 -2 960249..961751 - 500 189026105 - TPASS_0882 - hypothetical protein 870 37.89 -2 961717..962814 - 365 189026106 - TPASS_0883 - hypothetical integral membrane protein 871 45.09 -1 962832..963920 - 362 189026107 - TPASS_0884 - hypothetical integral membrane protein 872 56.24 0 963950..964390 - 146 189026108 dut TPASS_0885 - deoxyuridine 5'-triphosphate nucleotidohydrolase 873 53.53 0 964387..966495 - 702 189026109 pnp TPASS_0886 - polyribonucleotide nucleotidyltransferase 874 53.33 0 966643..966912 - 89 189026110 rpsO TPASS_0887 - ribosomal protein S15 875 60.51 +1 966928..967755 - 275 189026111 ribF TPASS_0888 - riboflavin kinase/FMN adenylyltransferase 876 56.40 0 967759..968859 - 366 189026112 truB TPASS_0889 - tRNA pseudouridine 55 synthase 877 49.08 0 968837..969217 - 126 189026113 rbfA TPASS_0890 - ribosome-binding factor A 878 52.87 0 969214..971742 - 842 189026114 infB TPASS_0891 - translation initiation factor 2 879 49.66 0 971918..973375 - 485 189026115 nusA TPASS_0892 - N utilization substance protein A 880 58.17 +1 973425..973895 - 156 189026116 - TPASS_0893 - hypothetical protein 881 51.22 0 974070..975092 - 340 189026117 - TPASS_0894 - hypothetical protein 882 53.85 0 975099..975605 - 168 189026118 - TPASS_0895 - hypothetical protein 883 49.67 0 975627..975779 - 50 189026119 - TPASS_0896 - hypothetical protein 884 36.23 -2 975761..977278 - 505 189026120 tprK TPASS_0897 - protein TprK 885 58.04 +1 977275..980994 - 1239 189026121 - TPASS_0898 - possible ATP-dependent nuclease, subunit A 886 53.74 0 980991..981578 - 195 189026122 - TPASS_0899 - hypothetical protein 887 55.81 0 981557..983950 - 797 189026123 - TPASS_0900 - hypothetical protein 888 51.31 0 983989..985401 - 470 189026124 - TPASS_0901 - hypothetical integral membrane protein 889 55.78 0 985442..986323 - 293 189026125 est TPASS_0902 - carboxylesterase 890 57.72 +1 986325..987923 + 532 189026126 murD TPASS_0903 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 891 50.00 0 987916..988167 + 83 189026127 - TPASS_0904 - hypothetical protein 892 59.95 +1 988130..988501 + 123 189026128 rpsP TPASS_0905 - ribosomal protein S16 893 55.56 0 988510..988752 + 80 189026129 - TPASS_0906 - hypothetical protein 894 57.14 0 988815..989339 + 174 189026130 - TPASS_0907 - hypothetical protein 895 55.64 0 989336..990088 + 250 189026131 trmD TPASS_0908 - tRNA (guanine-N1)-methyltransferase 896 52.15 0 990060..990431 + 123 189026132 rplS TPASS_0909 - ribosomal protein L19 897 57.11 0 990428..991348 + 306 189026133 - TPASS_0910 - hypothetical protein 898 48.41 -1 991370..991621 + 83 189026134 - TPASS_0911 - hypothetical protein 899 47.69 -1 991634..992956 + 440 189026135 - TPASS_0912 - hypothetical protein 900 48.82 0 992940..993320 + 126 189026136 - TPASS_0913 - hypothetical protein 901 47.80 -1 993492..993878 + 128 189026137 - TPASS_0914 - hypothetical protein 902 49.89 0 993952..995286 + 444 189026138 - TPASS_0915 - hypothetical protein 903 55.81 0 995343..995471 + 42 189026139 - TPASS_0916 - hypothetical protein 904 48.37 -1 995455..996804 + 449 189026140 mgtE TPASS_0917 - Mg2+ transport protein 905 61.50 +1 996819..997592 + 257 189026141 - TPASS_0918 - hypothetical integral membrane protein 906 49.06 0 997618..997935 - 105 189026142 trx TPASS_0919 - thioredoxin 907 54.57 0 998158..1000587 + 809 189026143 - TPASS_0920 - hypothetical protein 908 49.40 0 1000695..1002032 + 445 189026144 - TPASS_0921 - NADH oxidase 909 65.21 +2 1002166..1003059 - 297 189026145 - TPASS_0922 - hypothetical protein 910 56.57 0 1003098..1004117 - 339 189026146 - TPASS_0923 - hypothetical protein 911 56.46 0 1004441..1006027 + 528 189026147 tex TPASS_0924 - protein Tex 912 53.06 0 1007144..1007584 + 146 189026148 - TPASS_0925 - flavodoxin 913 56.27 0 1007735..1009273 - 512 189026149 - TPASS_0926 - possible signal peptidase I 914 52.79 0 1009365..1009955 + 196 189026150 - TPASS_0927 - hypothetical protein 915 59.38 +1 1010050..1010790 + 246 189026151 - TPASS_0928 - hypothetical protein 916 55.25 0 1010802..1011572 + 256 189026152 - TPASS_0929 - hypothetical protein 917 50.64 0 1011596..1013317 + 573 189026153 - TPASS_0930 - hypothetical protein 918 46.19 -1 1013401..1014831 - 476 189026154 - TPASS_0931 - hypothetical protein 919 53.76 0 1014841..1014933 - 30 189026155 - TPASS_0932 - hypothetical protein 920 51.32 0 1014943..1016565 - 540 189026156 murE TPASS_0933 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase 921 49.18 0 1016701..1017924 + 407 189026157 - TPASS_0934 - possible glutamate transporter 922 50.37 0 1017917..1018855 - 312 189026158 - TPASS_0935 - possible N-acetylphosphinothricin-tripetide-deacetylase 923 52.23 0 1019049..1020122 - 357 189026159 - TPASS_0936 - possible hemolysin 924 53.62 0 1020294..1020929 - 211 189026160 - TPASS_0937 - hypothetical protein 925 55.11 0 1020926..1021756 - 276 189026161 - TPASS_0938 - hypothetical protein 926 51.48 0 1021821..1025375 - 1184 189026162 - TPASS_0939 - pyruvate oxidoreductase 927 54.61 0 1025391..1025531 - 46 189026163 - TPASS_0940 - hypothetical protein 928 50.29 0 1025570..1026088 - 172 189026164 - TPASS_0941 - hypothetical protein 929 56.34 0 1026165..1026629 - 154 189026165 - TPASS_0942 - hypothetical protein 930 51.23 0 1026635..1027081 - 148 189026166 fliS TPASS_0943 - flagellar protein 931 53.20 0 1027130..1028302 - 390 189026167 - TPASS_0944 - hypothetical protein 932 54.34 0 1028473..1029129 - 218 189026168 cfxE TPASS_0945 - ribulose-phosphate 3-epimerase 933 57.25 +1 1029281..1029949 + 222 189026169 gidB TPASS_0946 - glucose-inhibited division protein B 934 52.47 0 1029994..1030641 - 215 189026170 cyp TPASS_0947 - peptidyl-prolyl cis-trans isomerase, cyclophilin-binding 935 51.44 0 1030638..1031333 - 231 189026171 jag TPASS_0948 - spoIIIJ-associated protein 936 51.30 0 1031349..1033346 - 665 189026172 - TPASS_0949 - membrane protein 937 55.79 0 1033622..1033906 - 94 189026173 - TPASS_0950 - hypothetical protein 938 59.62 +1 1033910..1034065 - 51 189026174 rpmH TPASS_0951 - ribosomal protein L34 939 48.94 0 1034185..1035222 - 345 189026175 - TPASS_0952 - possible lipase 940 56.09 0 1035304..1036494 - 396 189026176 traB TPASS_0953 - pheromone shutdown protein 941 53.38 0 1036581..1038017 - 478 189026177 - TPASS_0954 - hypothetical protein 942 53.85 0 1038089..1038361 - 90 189026178 - TPASS_0955 - hypothetical protein 943 56.07 0 1038457..1039428 + 323 189026179 - TPASS_0956 - hypothetical protein 944 50.15 0 1039519..1040547 + 342 189026180 tp33 TPASS_0957 - protein Tp33 945 52.66 0 1040579..1042477 + 632 189026181 dctM TPASS_0958 - dicarboxylate transporter 946 54.36 0 1042546..1042935 - 129 189026182 - TPASS_0959 - hypothetical protein 947 52.96 0 1042947..1043741 - 264 189026183 flgG1 TPASS_0960 - flagellar basal-body rod protein 948 47.18 -1 1043817..1044632 - 271 189026184 flgG2 TPASS_0961 - flagellar basal-body rod protein 949 50.77 0 1044718..1045950 - 410 189026185 - TPASS_0962 - hypothetical integral membrane protein 950 52.36 0 1046061..1047290 - 409 189026186 - TPASS_0963 - hypothetical integral membrane protein 951 54.80 0 1047280..1047987 - 235 189026187 - TPASS_0964 - ABC transporter, ATP-binding protein 952 53.17 0 1047987..1048949 - 320 189026188 - TPASS_0965 - possible membrane fusion protein 953 58.72 +1 1048974..1050608 - 544 189026189 - TPASS_0966 - hypothetical protein 954 60.23 +1 1050655..1052208 - 517 189026190 - TPASS_0967 - hypothetical protein 955 59.89 +1 1052205..1053827 - 540 189026191 - TPASS_0968 - hypothetical protein 956 57.41 +1 1053824..1055443 - 539 189026192 - TPASS_0969 - hypothetical protein 957 55.56 0 1055440..1055556 - 38 189026193 - TPASS_0970 - hypothetical protein 958 55.12 0 1055578..1056192 - 204 189026194 tpd TPASS_0971 - membrane antigen, pathogen-specific 959 59.09 +1 1056348..1057694 - 448 189026195 - TPASS_0972 - hypothetical integral membrane protein 960 57.82 +1 1057782..1059443 + 553 189026196 pheS TPASS_0973 - phenylalanyl-tRNA synthetase, subunit alpha 961 56.03 0 1059495..1059776 - 93 189026197 - TPASS_0974 - hypothetical protein 962 59.39 +1 1059828..1060652 - 274 189026198 - TPASS_0975 - hypothetical protein 963 58.62 +1 1060700..1062079 + 459 189026199 - TPASS_0976 - hypothetical protein 964 56.91 0 1062066..1062926 + 286 189026200 - TPASS_0977 - hypothetical protein 965 50.17 0 1062923..1063516 + 197 189026201 lsp TPASS_0978 - signal peptidase II 966 51.68 0 1063686..1064459 + 257 189026202 - TPASS_0979 - hypothetical protein 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0