version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 810 55.30 0 891225..892130 - 301 189026046 - TPASS_0822 - hypothetical protein 811 55.30 0 892218..892604 - 128 189026047 rbo TPASS_0823 - desulfoferrodoxin 812 56.05 0 893001..894893 + 630 189026048 dxs TPASS_0824 - deoxyxylulose-5-phosphate synthase 813 62.90 +2 894890..895075 + 61 189026049 - TPASS_0825 - hypothetical protein 814 51.09 0 895062..895883 + 273 189026050 - TPASS_0826 - hypothetical protein 815 53.44 0 895546..896823 + 425 189026051 - TPASS_0827 - hypothetical protein 816 49.21 0 896820..897197 + 125 189026052 acpS TPASS_0828 - holo-acyl-carrier protein synthase 817 45.76 -1 897194..898078 + 294 189026053 - TPASS_0829 - hypothetical protein 818 50.89 0 898075..898917 + 280 189026054 hisT TPASS_0830 - pseudouridylate synthase 819 50.17 0 898927..900696 - 589 189026055 argS TPASS_0831 - arginyl-tRNA synthetase 820 55.88 0 900719..901534 - 271 189026056 - TPASS_0832 - hypothetical protein 821 56.02 0 901601..902323 + 240 189026057 - TPASS_0833 - hypothetical protein 822 51.88 0 902380..903630 - 416 189026058 tyrS TPASS_0834 - tyrosyl-tRNA synthetase 823 53.37 0 903717..906521 - 934 189026059 - TPASS_0835 - possible ankyrin 824 53.09 0 906662..907486 - 274 189026060 - TPASS_0836 - hypothetical protein 825 57.90 +1 907634..909412 + 592 189026061 thrS TPASS_0837 - threonyl-tRNA synthetase 826 46.55 -1 909461..911125 - 554 189026062 - TPASS_0838 - ABC transporter, ATP-binding protein 827 50.50 0 911200..912207 - 335 189026063 - TPASS_0839 - hypothetical protein 828 49.78 0 912312..914561 + 749 189026064 - TPASS_0840 - hypothetical integral membrane protein 829 52.88 0 914623..916080 - 485 189026065 htrA2 TPASS_0841 - periplasmic serine protease DO 830 55.08 0 916392..917159 - 255 189026066 map TPASS_0842 - methionine aminopeptidase 831 54.67 0 917283..918107 - 274 189026067 - TPASS_0843 - possible heat shock protein 832 54.89 0 918200..919252 + 350 189026068 gap TPASS_0844 - glyceraldehyde 3-phosphate dehydrogenase 833 61.93 +2 919307..919897 - 196 189026069 - TPASS_0845 - hypothetical protein 834 53.82 0 919878..920204 - 108 189026070 - TPASS_0846 - hypothetical protein 835 50.30 0 920204..920539 - 111 189026071 - TPASS_0847 - hypothetical protein 836 52.30 0 920533..920901 - 122 189026072 rplT TPASS_0848 - ribosomal protein L20 837 45.27 -1 920934..921134 - 66 189026073 rpmI TPASS_0849 - ribosomal protein L35 838 51.48 0 921187..921726 - 179 189026074 infC TPASS_0850 - translation initiation factor 3 839 47.03 -1 921889..924063 + 724 189026075 - TPASS_0851 - hypothetical protein 840 48.45 -1 924092..925090 - 332 189026076 lgt TPASS_0852 - prolipoprotein diacylglyceryl transferase 841 46.97 -1 925241..926377 - 378 189026077 ylxH2 TPASS_0853 - ATP-binding protein 842 48.50 -1 926432..931033 - 1533 189026078 - TPASS_0854 - hypothetical protein 843 56.26 0 931030..934413 - 1127 189026079 - TPASS_0855 - hypothetical protein 844 58.49 +1 934569..935546 + 325 189026080 - TPASS_0856 - hypothetical protein 845 64.49 +2 935549..935869 - 106 189026081 - TPASS_0857 - hypothetical protein 846 57.70 +1 935854..937080 + 408 189026082 - TPASS_0858 - hypothetical protein 847 64.52 +2 937162..937860 + 232 189026083 - TPASS_0859 - hypothetical protein 848 59.20 +1 937925..938647 + 240 189026084 - TPASS_0860 - hypothetical protein 849 56.87 0 938722..940629 - 635 189026085 glmS TPASS_0861 - glucosamine-fructose-6-phosphate aminotransferase 850 54.09 0 940866..941660 - 264 189026086 fklB TPASS_0862 - peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa 851 57.94 +1 941795..943078 + 427 189026087 nifS2 TPASS_0863 - nitrogen fixation protein 852 55.58 0 943137..944777 - 546 189026088 - TPASS_0864 - hypothetical protein 853 54.33 0 944811..946253 - 480 189026089 - TPASS_0865 - hypothetical protein 854 57.53 +1 948246..948431 - 61 189026090 - TPASS_0867 - hypothetical protein 855 52.94 0 948600..948956 + 118 189026091 flaB1 TPASS_0868 - flagellar filament 34.5 kDa core protein 856 55.27 0 949468..949704 + 78 189026092 - TPASS_0869 - hypothetical protein 857 53.50 0 949732..950589 + 285 189026093 flaB3 TPASS_0870 - flagellar filament 31 kDa core protein 858 46.30 -1 950650..950811 - 53 189026094 - TPASS_0871 - hypothetical protein 859 53.90 0 950887..953055 + 722 189026095 fliD TPASS_0872 - flagellar filament cap protein 860 46.60 -1 953067..953669 + 200 189026096 - TPASS_0873 - hypothetical protein 861 46.38 -1 953666..953941 + 91 189026097 - TPASS_0874 - hypothetical protein 862 56.86 0 953981..954388 + 135 189026098 - TPASS_0875 - hypothetical protein 863 52.40 0 954435..955100 + 221 189026099 - TPASS_0876 - hypothetical protein 864 43.35 -2 955105..956202 + 365 189026100 - TPASS_0877 - hypothetical protein 865 44.06 -2 956215..957165 - 316 189026101 - TPASS_0878 - hypothetical protein 866 43.45 -2 957171..958652 - 493 189026102 - TPASS_0879 - hypothetical protein 867 42.15 -2 958649..959374 - 241 189026103 - TPASS_0880 - possible membrane spanning protein 868 46.84 -1 959364..960170 - 268 189026104 natA TPASS_0881 - ABC transporter, ATP-binding protein 869 42.91 -2 960249..961751 - 500 189026105 - TPASS_0882 - hypothetical protein 870 37.89 -2 961717..962814 - 365 189026106 - TPASS_0883 - hypothetical integral membrane protein 871 45.09 -1 962832..963920 - 362 189026107 - TPASS_0884 - hypothetical integral membrane protein 872 56.24 0 963950..964390 - 146 189026108 dut TPASS_0885 - deoxyuridine 5'-triphosphate nucleotidohydrolase 873 53.53 0 964387..966495 - 702 189026109 pnp TPASS_0886 - polyribonucleotide nucleotidyltransferase 874 53.33 0 966643..966912 - 89 189026110 rpsO TPASS_0887 - ribosomal protein S15 875 60.51 +1 966928..967755 - 275 189026111 ribF TPASS_0888 - riboflavin kinase/FMN adenylyltransferase 876 56.40 0 967759..968859 - 366 189026112 truB TPASS_0889 - tRNA pseudouridine 55 synthase 877 49.08 0 968837..969217 - 126 189026113 rbfA TPASS_0890 - ribosome-binding factor A 878 52.87 0 969214..971742 - 842 189026114 infB TPASS_0891 - translation initiation factor 2 879 49.66 0 971918..973375 - 485 189026115 nusA TPASS_0892 - N utilization substance protein A 880 58.17 +1 973425..973895 - 156 189026116 - TPASS_0893 - hypothetical protein 881 51.22 0 974070..975092 - 340 189026117 - TPASS_0894 - hypothetical protein 882 53.85 0 975099..975605 - 168 189026118 - TPASS_0895 - hypothetical protein 883 49.67 0 975627..975779 - 50 189026119 - TPASS_0896 - hypothetical protein 884 36.23 -2 975761..977278 - 505 189026120 tprK TPASS_0897 - protein TprK 885 58.04 +1 977275..980994 - 1239 189026121 - TPASS_0898 - possible ATP-dependent nuclease, subunit A 886 53.74 0 980991..981578 - 195 189026122 - TPASS_0899 - hypothetical protein 887 55.81 0 981557..983950 - 797 189026123 - TPASS_0900 - hypothetical protein 888 51.31 0 983989..985401 - 470 189026124 - TPASS_0901 - hypothetical integral membrane protein 889 55.78 0 985442..986323 - 293 189026125 est TPASS_0902 - carboxylesterase 890 57.72 +1 986325..987923 + 532 189026126 murD TPASS_0903 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 891 50.00 0 987916..988167 + 83 189026127 - TPASS_0904 - hypothetical protein 892 59.95 +1 988130..988501 + 123 189026128 rpsP TPASS_0905 - ribosomal protein S16 893 55.56 0 988510..988752 + 80 189026129 - TPASS_0906 - hypothetical protein 894 57.14 0 988815..989339 + 174 189026130 - TPASS_0907 - hypothetical protein 895 55.64 0 989336..990088 + 250 189026131 trmD TPASS_0908 - tRNA (guanine-N1)-methyltransferase 896 52.15 0 990060..990431 + 123 189026132 rplS TPASS_0909 - ribosomal protein L19 897 57.11 0 990428..991348 + 306 189026133 - TPASS_0910 - hypothetical protein 898 48.41 -1 991370..991621 + 83 189026134 - TPASS_0911 - hypothetical protein 899 47.69 -1 991634..992956 + 440 189026135 - TPASS_0912 - hypothetical protein 900 48.82 0 992940..993320 + 126 189026136 - TPASS_0913 - hypothetical protein 901 47.80 -1 993492..993878 + 128 189026137 - TPASS_0914 - hypothetical protein 902 49.89 0 993952..995286 + 444 189026138 - TPASS_0915 - hypothetical protein 903 55.81 0 995343..995471 + 42 189026139 - TPASS_0916 - hypothetical protein 904 48.37 -1 995455..996804 + 449 189026140 mgtE TPASS_0917 - Mg2+ transport protein 905 61.50 +1 996819..997592 + 257 189026141 - TPASS_0918 - hypothetical integral membrane protein 906 49.06 0 997618..997935 - 105 189026142 trx TPASS_0919 - thioredoxin 907 54.57 0 998158..1000587 + 809 189026143 - TPASS_0920 - hypothetical protein 908 49.40 0 1000695..1002032 + 445 189026144 - TPASS_0921 - NADH oxidase 909 65.21 +2 1002166..1003059 - 297 189026145 - TPASS_0922 - hypothetical protein 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0