version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 748 54.17 0 823598..823717 + 39 189025984 - TPASS_0759 - hypothetical protein 749 54.26 0 823674..825632 + 652 189025985 pbp3 TPASS_0760 - penicillin-binding protein 750 53.81 0 825613..826491 + 292 189025986 - TPASS_0761 - hypothetical protein 751 57.70 +1 826520..827701 + 393 189025987 - TPASS_0762 - hypothetical protein 752 53.93 0 827763..828704 - 313 189025988 - TPASS_0763 - hypothetical protein 753 53.74 0 828663..829838 + 391 189025989 - TPASS_0764 - hypothetical protein 754 52.95 0 829820..831649 - 609 189025990 ftsH TPASS_0765 - cell division protein 755 57.60 +1 832052..832933 + 293 189025991 - TPASS_0766 - hypothetical protein 756 52.97 0 833144..835231 + 695 189025992 fusA2 TPASS_0767 - translation elongation factor G 757 56.07 0 835370..836407 + 345 189025993 tmpA TPASS_0768 - membrane protein 758 55.83 0 836404..837381 + 325 189025994 tmpB TPASS_0769 - outer membrane protein 759 53.54 0 837426..839375 + 649 189025995 - TPASS_0770 - ATP-dependent RNA helicase 760 46.30 -1 839396..841177 - 593 189025996 - TPASS_0771 - hypothetical integral membrane protein 761 50.67 0 841181..842005 + 274 189025997 - TPASS_0772 - hypothetical protein 762 55.72 0 842045..843241 - 398 189025998 htrA1 TPASS_0773 - periplasmic serine protease DO 763 50.67 0 843586..844260 + 224 189025999 mgtC TPASS_0774 - Mg2+ transport protein 764 55.19 0 844340..844975 + 211 189026000 nth TPASS_0775 - endonuclease III 765 57.27 +1 845052..845828 - 258 189026001 - TPASS_0776 - hypothetical protein 766 49.78 0 845881..846105 - 74 189026002 - TPASS_0777 - hypothetical protein 767 53.95 0 846174..847085 - 303 189026003 mazG TPASS_0778 - protein MazG 768 50.39 0 847082..847726 - 214 189026004 dedA TPASS_0779 - protein DedA 769 55.39 0 847773..849812 - 679 189026005 nadE TPASS_0780 - NH(3)-dependent NAD(+) synthetase 770 54.33 0 849849..850310 - 153 189026006 - TPASS_0781 - hypothetical protein 771 51.58 0 850356..850799 - 147 189026007 - TPASS_0782 - hypothetical protein 772 51.76 0 850828..851961 - 377 189026008 - TPASS_0783 - hypothetical protein 773 54.83 0 852127..852726 + 199 189026009 - TPASS_0784 - hypothetical protein 774 49.78 0 852723..853409 + 228 189026010 - TPASS_0785 - hypothetical protein 775 52.24 0 853541..854254 + 237 189026011 - TPASS_0786 - possible ABC transporter, ATP-binding protein 776 51.43 0 854301..854720 - 139 189026012 - TPASS_0787 - hypothetical protein 777 58.14 +1 854802..855692 + 296 189026013 - TPASS_0788 - hypothetical protein 778 50.97 0 855705..856481 - 258 189026014 - TPASS_0789 - hypothetical protein 779 50.32 0 856500..859166 - 888 189026015 - TPASS_0790 - possible antibiotic transport protein 780 54.07 0 859309..859554 - 81 189026016 - TPASS_0791 - hypothetical protein 781 52.85 0 859540..860400 + 286 189026017 flaB2 TPASS_0792 - flagellar filament 33 kDa core protein 782 49.32 0 860479..862098 + 539 189026018 - TPASS_0793 - hypothetical protein 783 53.23 0 862135..863325 - 396 189026019 metK TPASS_0794 - S-adenosylmethionine synthetase 784 55.35 0 863379..863537 + 52 189026020 - TPASS_0795 - hypothetical protein 785 56.11 0 863526..864614 - 362 189026021 - TPASS_0796 - hypothetical protein 786 56.69 0 864674..865465 - 263 189026022 proC TPASS_0797 - 1-pyrroline-5-carboxylate reductase 787 53.86 0 865516..867951 - 811 189026023 metG TPASS_0798 - methionyl-tRNA synthetase 788 46.41 -1 867984..868136 + 50 189026024 - TPASS_0799 - hypothetical protein 789 57.84 +1 868279..869751 + 490 189026025 dacC TPASS_0800 - serine-type D-Ala-D-Ala carboxypeptidase 790 48.85 0 869812..872241 - 809 189026026 clpA TPASS_0801 - ATP-dependent Clp protease, subunit A 791 55.15 0 872287..872616 + 109 189026027 - TPASS_0802 - hypothetical protein 792 49.38 0 872630..873838 + 402 189026028 - TPASS_0803 - hypothetical protein 793 47.77 -1 873916..875079 + 387 189026029 ugpC TPASS_0804 - sugar ABC transporter, ATP-binding protein 794 55.53 0 874930..877209 - 759 189026030 rnb TPASS_0805 - exoribonuclease II 795 55.64 0 877206..878702 - 498 189026031 - TPASS_0806 - possible protein FemA 796 55.03 0 878831..879019 + 62 189026032 rpmF TPASS_0807 - ribosomal protein L32 797 48.10 -1 879080..879316 + 78 189026033 acpP TPASS_0808 - acyl carrier protein 798 56.86 0 879313..880077 + 254 189026034 rnc TPASS_0809 - ribonuclease III 799 55.04 0 880108..881019 + 303 189026035 dam TPASS_0810 - DNA adenine methyltransferase 800 44.44 -1 881090..881215 - 41 189026036 - TPASS_0811 - hypothetical protein 801 55.01 0 882626..883912 - 428 189026037 - TPASS_0813 - hypothetical protein 802 53.14 0 884135..885058 + 307 189026038 trxB TPASS_0814 - thioredoxin reductase 803 52.13 0 885180..886163 + 327 189026039 - TPASS_0815 - hypothetical protein 804 52.10 0 886235..886900 - 221 189026040 - TPASS_0816 - hypothetical protein 805 52.35 0 887038..888336 - 432 189026041 eno TPASS_0817 - enolase 806 52.29 0 888333..888485 - 50 189026042 - TPASS_0818 - hypothetical protein 807 51.23 0 888512..889444 - 310 189026043 - TPASS_0819 - hypothetical protein 808 55.64 0 889472..890242 - 256 189026044 - TPASS_0820 - hypothetical protein 809 53.90 0 890338..891144 - 268 189026045 tpn32 TPASS_0821 - lipoprotein Tpn32 810 55.30 0 891225..892130 - 301 189026046 - TPASS_0822 - hypothetical protein 811 55.30 0 892218..892604 - 128 189026047 rbo TPASS_0823 - desulfoferrodoxin 812 56.05 0 893001..894893 + 630 189026048 dxs TPASS_0824 - deoxyxylulose-5-phosphate synthase 813 62.90 +2 894890..895075 + 61 189026049 - TPASS_0825 - hypothetical protein 814 51.09 0 895062..895883 + 273 189026050 - TPASS_0826 - hypothetical protein 815 53.44 0 895546..896823 + 425 189026051 - TPASS_0827 - hypothetical protein 816 49.21 0 896820..897197 + 125 189026052 acpS TPASS_0828 - holo-acyl-carrier protein synthase 817 45.76 -1 897194..898078 + 294 189026053 - TPASS_0829 - hypothetical protein 818 50.89 0 898075..898917 + 280 189026054 hisT TPASS_0830 - pseudouridylate synthase 819 50.17 0 898927..900696 - 589 189026055 argS TPASS_0831 - arginyl-tRNA synthetase 820 55.88 0 900719..901534 - 271 189026056 - TPASS_0832 - hypothetical protein 821 56.02 0 901601..902323 + 240 189026057 - TPASS_0833 - hypothetical protein 822 51.88 0 902380..903630 - 416 189026058 tyrS TPASS_0834 - tyrosyl-tRNA synthetase 823 53.37 0 903717..906521 - 934 189026059 - TPASS_0835 - possible ankyrin 824 53.09 0 906662..907486 - 274 189026060 - TPASS_0836 - hypothetical protein 825 57.90 +1 907634..909412 + 592 189026061 thrS TPASS_0837 - threonyl-tRNA synthetase 826 46.55 -1 909461..911125 - 554 189026062 - TPASS_0838 - ABC transporter, ATP-binding protein 827 50.50 0 911200..912207 - 335 189026063 - TPASS_0839 - hypothetical protein 828 49.78 0 912312..914561 + 749 189026064 - TPASS_0840 - hypothetical integral membrane protein 829 52.88 0 914623..916080 - 485 189026065 htrA2 TPASS_0841 - periplasmic serine protease DO 830 55.08 0 916392..917159 - 255 189026066 map TPASS_0842 - methionine aminopeptidase 831 54.67 0 917283..918107 - 274 189026067 - TPASS_0843 - possible heat shock protein 832 54.89 0 918200..919252 + 350 189026068 gap TPASS_0844 - glyceraldehyde 3-phosphate dehydrogenase 833 61.93 +2 919307..919897 - 196 189026069 - TPASS_0845 - hypothetical protein 834 53.82 0 919878..920204 - 108 189026070 - TPASS_0846 - hypothetical protein 835 50.30 0 920204..920539 - 111 189026071 - TPASS_0847 - hypothetical protein 836 52.30 0 920533..920901 - 122 189026072 rplT TPASS_0848 - ribosomal protein L20 837 45.27 -1 920934..921134 - 66 189026073 rpmI TPASS_0849 - ribosomal protein L35 838 51.48 0 921187..921726 - 179 189026074 infC TPASS_0850 - translation initiation factor 3 839 47.03 -1 921889..924063 + 724 189026075 - TPASS_0851 - hypothetical protein 840 48.45 -1 924092..925090 - 332 189026076 lgt TPASS_0852 - prolipoprotein diacylglyceryl transferase 841 46.97 -1 925241..926377 - 378 189026077 ylxH2 TPASS_0853 - ATP-binding protein 842 48.50 -1 926432..931033 - 1533 189026078 - TPASS_0854 - hypothetical protein 843 56.26 0 931030..934413 - 1127 189026079 - TPASS_0855 - hypothetical protein 844 58.49 +1 934569..935546 + 325 189026080 - TPASS_0856 - hypothetical protein 845 64.49 +2 935549..935869 - 106 189026081 - TPASS_0857 - hypothetical protein 846 57.70 +1 935854..937080 + 408 189026082 - TPASS_0858 - hypothetical protein 847 64.52 +2 937162..937860 + 232 189026083 - TPASS_0859 - hypothetical protein 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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