version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 690 51.47 0 768414..768617 - 67 189025926 - TPASS_0701 - possible DNA-directed RNA polymerase 691 60.34 +1 768787..769323 - 178 189025927 - TPASS_0702 - hypothetical protein 692 57.71 +1 769338..770018 - 226 189025928 - TPASS_0703 - hypothetical protein 693 53.23 0 770018..772138 - 706 189025929 recJ TPASS_0704 - single-stranded-DNA-specific exonuclease 694 55.56 0 772281..774935 - 884 189025930 pbp2 TPASS_0705 - penicillin-binding protein 695 56.42 0 775232..776158 - 308 189025931 - TPASS_0706 - hypothetical protein 696 63.54 +2 776220..776699 - 159 189025932 - TPASS_0707 - hypothetical protein 697 58.33 +1 776765..777280 + 171 189025933 - TPASS_0708 - hypothetical protein 698 50.82 0 777336..778124 + 262 189025934 - TPASS_0709 - RNA polymerase sigma-28 factor 699 52.31 0 778133..780103 + 656 189025935 - TPASS_0710 - hypothetical protein 700 53.05 0 780140..780712 + 190 189025936 - TPASS_0711 - hypothetical protein 701 44.15 -2 780727..781641 - 304 189025937 ylxH1 TPASS_0712 - ATP-binding protein 702 42.85 -2 781613..782926 - 437 189025938 flhF TPASS_0713 - flagellar-associated GTP-binding protein 703 42.98 -2 782961..785084 - 707 189025939 flhA TPASS_0714 - flagellar biosynthesis protein 704 41.56 -2 785093..786223 - 376 189025940 flhB TPASS_0715 - flagellar biosynthetic protein 705 43.73 -2 786220..787017 - 265 189025941 fliR TPASS_0716 - flagellar biosynthetic protein 706 47.72 -1 787030..787314 - 94 189025942 fliQ TPASS_0717 - flagellar biosynthetic protein 707 48.53 0 787333..788148 - 271 189025943 fliP TPASS_0718 - flagellar biosynthetic protein 708 55.77 0 788145..788933 - 262 189025944 - TPASS_0719 - hypothetical protein 709 52.53 0 788869..789915 - 348 189025945 fliY TPASS_0720 - flagellar motor switch protein 710 51.21 0 789908..790942 - 344 189025946 fliM TPASS_0721 - flagellar motor switch protein 711 50.46 0 790964..791512 - 182 189025947 fliL TPASS_0722 - flagellar protein 712 55.56 0 791491..791625 - 44 189025948 - TPASS_0723 - hypothetical protein 713 51.88 0 791622..792338 - 238 189025949 motB TPASS_0724 - flagellar motor rotation protein 714 51.28 0 792344..793123 - 259 189025950 motA TPASS_0725 - flagellar motor rotation protein 715 45.45 -1 793139..793336 - 65 189025951 flbD TPASS_0726 - flagellar protein 716 50.65 0 793394..794785 - 463 189025952 flgE TPASS_0727 - flagellar hook protein 717 53.90 0 794856..795317 - 153 189025953 flgD TPASS_0728 - flagellar hook assembly scaffolding protein 718 62.65 +2 795393..797036 - 547 189025954 tap1 TPASS_0729 - treponemal aqueous protein 719 55.37 0 797005..798102 + 365 189025955 - TPASS_0730 - hypothetical protein 720 58.93 +1 798122..798832 + 236 189025956 - TPASS_0731 - hypothetical protein 721 62.03 +2 798797..799744 - 315 189025957 folD TPASS_0732 - methylenetetrahydrofolate dehydrogenase 722 59.24 +1 799840..800499 + 219 189025958 - TPASS_0733 - hypothetical protein 723 57.41 +1 800532..801233 - 233 189025959 deoD TPASS_0734 - purine nucleoside phosphorylase 724 55.11 0 801315..802871 - 518 189025960 gltA TPASS_0735 - glutamate synthase 725 51.84 0 802874..803716 - 280 189025961 hydG TPASS_0736 - hydrogenase, gamma chain 726 52.10 0 803950..805260 + 436 189025962 msmE TPASS_0737 - sugar ABC transporter, periplasmic binding protein 727 58.93 +1 805306..805641 - 111 189025963 - TPASS_0738 - hypothetical protein 728 45.86 -1 805638..806834 - 398 189025964 - TPASS_0739 - hypothetical protein 729 55.38 0 806908..807474 - 188 189025965 - TPASS_0740 - hypothetical protein 730 55.28 0 807602..808216 - 204 189025966 - TPASS_0741 - hypothetical protein 731 57.74 +1 808213..809343 - 376 189025967 obg TPASS_0742 - GTP-binding protein 732 54.17 0 809461..809724 - 87 189025968 rpmA TPASS_0743 - ribosomal protein L27 733 56.88 0 809755..810081 - 108 189025969 - TPASS_0744 - hypothetical protein 734 51.89 0 810094..810411 - 105 189025970 rplU TPASS_0745 - ribosomal protein L21 735 51.07 0 810518..813223 - 901 189025971 - TPASS_0746 - pyruvate, phosphate dikinase 736 50.14 0 813233..814267 - 344 189025972 - TPASS_0747 - hypothetical protein 737 48.26 -1 814356..816392 - 678 189025973 cfpA TPASS_0748 - cytoplasmic filament protein A 738 37.84 -2 816370..816591 - 73 189025974 - TPASS_0749 - hypothetical protein 739 52.23 0 816561..817232 + 223 189025975 - TPASS_0750 - hypothetical protein 740 56.58 0 817269..817982 + 237 189025976 - TPASS_0751 - hypothetical protein/laminin-binding protein 741 54.59 0 818120..819262 - 380 189025977 - TPASS_0752 - hypothetical protein 742 47.72 -1 819343..819627 - 94 189025978 - TPASS_0753 - hypothetical protein 743 48.80 0 819624..820994 - 456 189025979 - TPASS_0754 - hypothetical protein 744 48.43 -1 821036..821578 - 180 189025980 ptsN2 TPASS_0755 - PTS system, nitrogen regulatory IIA component 745 55.42 0 821778..822737 - 319 189025981 fmt TPASS_0756 - methionyl-tRNA formyltransferase 746 55.42 0 822741..823229 - 162 189025982 def TPASS_0757 - polypeptide deformylase 747 48.57 0 823270..823479 - 69 189025983 rpsU TPASS_0758 - ribosomal protein S21 748 54.17 0 823598..823717 + 39 189025984 - TPASS_0759 - hypothetical protein 749 54.26 0 823674..825632 + 652 189025985 pbp3 TPASS_0760 - penicillin-binding protein 750 53.81 0 825613..826491 + 292 189025986 - TPASS_0761 - hypothetical protein 751 57.70 +1 826520..827701 + 393 189025987 - TPASS_0762 - hypothetical protein 752 53.93 0 827763..828704 - 313 189025988 - TPASS_0763 - hypothetical protein 753 53.74 0 828663..829838 + 391 189025989 - TPASS_0764 - hypothetical protein 754 52.95 0 829820..831649 - 609 189025990 ftsH TPASS_0765 - cell division protein 755 57.60 +1 832052..832933 + 293 189025991 - TPASS_0766 - hypothetical protein 756 52.97 0 833144..835231 + 695 189025992 fusA2 TPASS_0767 - translation elongation factor G 757 56.07 0 835370..836407 + 345 189025993 tmpA TPASS_0768 - membrane protein 758 55.83 0 836404..837381 + 325 189025994 tmpB TPASS_0769 - outer membrane protein 759 53.54 0 837426..839375 + 649 189025995 - TPASS_0770 - ATP-dependent RNA helicase 760 46.30 -1 839396..841177 - 593 189025996 - TPASS_0771 - hypothetical integral membrane protein 761 50.67 0 841181..842005 + 274 189025997 - TPASS_0772 - hypothetical protein 762 55.72 0 842045..843241 - 398 189025998 htrA1 TPASS_0773 - periplasmic serine protease DO 763 50.67 0 843586..844260 + 224 189025999 mgtC TPASS_0774 - Mg2+ transport protein 764 55.19 0 844340..844975 + 211 189026000 nth TPASS_0775 - endonuclease III 765 57.27 +1 845052..845828 - 258 189026001 - TPASS_0776 - hypothetical protein 766 49.78 0 845881..846105 - 74 189026002 - TPASS_0777 - hypothetical protein 767 53.95 0 846174..847085 - 303 189026003 mazG TPASS_0778 - protein MazG 768 50.39 0 847082..847726 - 214 189026004 dedA TPASS_0779 - protein DedA 769 55.39 0 847773..849812 - 679 189026005 nadE TPASS_0780 - NH(3)-dependent NAD(+) synthetase 770 54.33 0 849849..850310 - 153 189026006 - TPASS_0781 - hypothetical protein 771 51.58 0 850356..850799 - 147 189026007 - TPASS_0782 - hypothetical protein 772 51.76 0 850828..851961 - 377 189026008 - TPASS_0783 - hypothetical protein 773 54.83 0 852127..852726 + 199 189026009 - TPASS_0784 - hypothetical protein 774 49.78 0 852723..853409 + 228 189026010 - TPASS_0785 - hypothetical protein 775 52.24 0 853541..854254 + 237 189026011 - TPASS_0786 - possible ABC transporter, ATP-binding protein 776 51.43 0 854301..854720 - 139 189026012 - TPASS_0787 - hypothetical protein 777 58.14 +1 854802..855692 + 296 189026013 - TPASS_0788 - hypothetical protein 778 50.97 0 855705..856481 - 258 189026014 - TPASS_0789 - hypothetical protein 779 50.32 0 856500..859166 - 888 189026015 - TPASS_0790 - possible antibiotic transport protein 780 54.07 0 859309..859554 - 81 189026016 - TPASS_0791 - hypothetical protein 781 52.85 0 859540..860400 + 286 189026017 flaB2 TPASS_0792 - flagellar filament 33 kDa core protein 782 49.32 0 860479..862098 + 539 189026018 - TPASS_0793 - hypothetical protein 783 53.23 0 862135..863325 - 396 189026019 metK TPASS_0794 - S-adenosylmethionine synthetase 784 55.35 0 863379..863537 + 52 189026020 - TPASS_0795 - hypothetical protein 785 56.11 0 863526..864614 - 362 189026021 - TPASS_0796 - hypothetical protein 786 56.69 0 864674..865465 - 263 189026022 proC TPASS_0797 - 1-pyrroline-5-carboxylate reductase 787 53.86 0 865516..867951 - 811 189026023 metG TPASS_0798 - methionyl-tRNA synthetase 788 46.41 -1 867984..868136 + 50 189026024 - TPASS_0799 - hypothetical protein 789 57.84 +1 868279..869751 + 490 189026025 dacC TPASS_0800 - serine-type D-Ala-D-Ala carboxypeptidase 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0