version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 642 55.11 0 718302..719201 + 299 189025878 potB TPASS_0653 - spermidine/putrescine ABC transporter, permease protein 643 50.06 0 719194..720012 + 272 189025879 potC TPASS_0654 - spermidine/putrescine ABC transporter, permease protein 644 47.56 -1 720048..721094 + 348 189025880 potD TPASS_0655 - spermidine/putrescine ABC transporter, periplasmic binding protein 645 55.88 0 721063..721164 + 33 189025881 - TPASS_0656 - hypothetical protein 646 49.10 0 721149..721370 - 73 189025882 csrA TPASS_0657 - carbon storage regulator 647 48.57 0 721364..721816 - 150 189025883 - TPASS_0658 - possible transmembrane protein 648 51.96 0 721835..723085 - 416 189025884 flgL TPASS_0659 - flagellar hook-associated protein 3 649 51.17 0 723119..724996 - 625 189025885 flgK TPASS_0660 - flagellar hook-associated protein 1 650 55.36 0 725102..725614 - 170 189025886 - TPASS_0661 - hypothetical protein 651 53.35 0 725737..726735 - 332 189025887 cbbA TPASS_0662 - fructose-bisphosphate aldolase 652 54.73 0 727002..727730 + 242 189025888 - TPASS_0663 - possible outer membrane protein 653 54.55 0 727727..728452 + 241 189025889 flaA2 TPASS_0664 - flagellar filament outer layer protein 654 57.54 +1 728470..729225 - 251 189025890 - TPASS_0665 - hypothetical protein 655 53.74 0 729222..729515 - 97 189025891 - TPASS_0666 - hypothetical protein 656 50.18 0 729559..731226 - 555 189025892 udk TPASS_0667 - uridine kinase 657 44.61 -1 731457..732059 - 200 189025893 - TPASS_0668 - hypothetical integral membrane protein 658 44.38 -1 732056..735568 - 1170 189025894 dnaE TPASS_0669 - DNA polymerase III, subunit alpha 659 54.41 0 735722..736912 - 396 189025895 ddlA TPASS_0670 - D-alanine--D-alanine ligase 660 49.95 0 736914..737948 - 344 189025896 - TPASS_0671 - possible sn-1,2-diacylglycerol cholinephosphotransferase 661 51.91 0 737979..739367 - 462 189025897 glyS TPASS_0672 - glycyl-tRNA synthetase 662 56.32 0 739502..741115 - 537 189025898 gltX TPASS_0673 - glutamyl-tRNA synthetase 663 63.38 +2 741293..741901 + 202 189025899 - TPASS_0674 - hypothetical protein 664 53.95 0 741907..742905 + 332 189025900 - TPASS_0675 - hypothetical protein 665 60.57 +1 742917..743195 - 92 189025901 - TPASS_0676 - hypothetical protein 666 58.95 +1 743217..743825 - 202 189025902 - TPASS_0677 - hypothetical protein 667 59.85 +1 744079..745002 + 307 189025903 - TPASS_0678 - hypothetical protein 668 52.83 0 744999..745316 + 105 189025904 - TPASS_0679 - hypothetical protein 669 52.88 0 745357..746415 - 352 189025905 gcp TPASS_0680 - o-sialoglycoprotein endopeptidase 670 55.82 0 746466..747599 - 377 189025906 alr TPASS_0681 - alanine racemase 671 57.05 0 747628..748230 - 200 189025907 ftsJ TPASS_0682 - cell division protein 672 53.88 0 748323..749417 + 364 189025908 - TPASS_0683 - octaprenyl-diphosphate synthase 673 54.62 0 749710..750921 + 403 189025909 mglB2 TPASS_0684 - methylgalactoside ABC transporter, periplasmic galactose-binding protein 674 50.70 0 751041..752531 + 496 189025910 mglA TPASS_0685 - methylgalactoside ABC transporter, ATP binding protein 675 51.94 0 752546..754141 + 531 189025911 mglC TPASS_0686 - methylgalactoside ABC transporter, permease protein 676 42.50 -2 754269..756329 - 686 189025912 recG TPASS_0687 - DNA recombinase 677 38.95 -2 756385..757398 - 337 189025913 mccF TPASS_0688 - immunity protein 678 43.82 -2 757399..758781 - 460 189025914 - TPASS_0689 - GTP-binding protein 679 44.50 -1 758817..759398 - 193 189025915 - TPASS_0690 - hypothetical protein 680 46.77 -1 759391..760149 - 252 189025916 - TPASS_0691 - hypothetical protein 681 51.06 0 760177..761400 - 407 189025917 recA TPASS_0692 - protein RecA 682 56.69 0 761661..762983 - 440 189025918 - TPASS_0693 - hypothetical protein 683 58.55 +1 763143..763820 + 225 189025919 - TPASS_0694 - possible 5,10-methenyltetrahydrofolate synthetase 684 59.87 +1 763908..765701 + 597 189025920 - TPASS_0695 - possible phosphoribosylglycinamide formyltransferase 685 54.48 0 765689..766525 - 278 189025921 - TPASS_0696 - possible nicotinamidase 686 56.49 0 766587..767195 - 202 189025922 - TPASS_0697 - hypothetical protein 687 53.11 0 767226..767771 - 181 189025923 - TPASS_0698 - hypothetical protein 688 54.95 0 767768..767878 - 36 189025924 - TPASS_0699 - hypothetical protein 689 57.00 0 767884..768276 - 130 189025925 - TPASS_0700 - hypothetical protein 690 51.47 0 768414..768617 - 67 189025926 - TPASS_0701 - possible DNA-directed RNA polymerase 691 60.34 +1 768787..769323 - 178 189025927 - TPASS_0702 - hypothetical protein 692 57.71 +1 769338..770018 - 226 189025928 - TPASS_0703 - hypothetical protein 693 53.23 0 770018..772138 - 706 189025929 recJ TPASS_0704 - single-stranded-DNA-specific exonuclease 694 55.56 0 772281..774935 - 884 189025930 pbp2 TPASS_0705 - penicillin-binding protein 695 56.42 0 775232..776158 - 308 189025931 - TPASS_0706 - hypothetical protein 696 63.54 +2 776220..776699 - 159 189025932 - TPASS_0707 - hypothetical protein 697 58.33 +1 776765..777280 + 171 189025933 - TPASS_0708 - hypothetical protein 698 50.82 0 777336..778124 + 262 189025934 - TPASS_0709 - RNA polymerase sigma-28 factor 699 52.31 0 778133..780103 + 656 189025935 - TPASS_0710 - hypothetical protein 700 53.05 0 780140..780712 + 190 189025936 - TPASS_0711 - hypothetical protein 701 44.15 -2 780727..781641 - 304 189025937 ylxH1 TPASS_0712 - ATP-binding protein 702 42.85 -2 781613..782926 - 437 189025938 flhF TPASS_0713 - flagellar-associated GTP-binding protein 703 42.98 -2 782961..785084 - 707 189025939 flhA TPASS_0714 - flagellar biosynthesis protein 704 41.56 -2 785093..786223 - 376 189025940 flhB TPASS_0715 - flagellar biosynthetic protein 705 43.73 -2 786220..787017 - 265 189025941 fliR TPASS_0716 - flagellar biosynthetic protein 706 47.72 -1 787030..787314 - 94 189025942 fliQ TPASS_0717 - flagellar biosynthetic protein 707 48.53 0 787333..788148 - 271 189025943 fliP TPASS_0718 - flagellar biosynthetic protein 708 55.77 0 788145..788933 - 262 189025944 - TPASS_0719 - hypothetical protein 709 52.53 0 788869..789915 - 348 189025945 fliY TPASS_0720 - flagellar motor switch protein 710 51.21 0 789908..790942 - 344 189025946 fliM TPASS_0721 - flagellar motor switch protein 711 50.46 0 790964..791512 - 182 189025947 fliL TPASS_0722 - flagellar protein 712 55.56 0 791491..791625 - 44 189025948 - TPASS_0723 - hypothetical protein 713 51.88 0 791622..792338 - 238 189025949 motB TPASS_0724 - flagellar motor rotation protein 714 51.28 0 792344..793123 - 259 189025950 motA TPASS_0725 - flagellar motor rotation protein 715 45.45 -1 793139..793336 - 65 189025951 flbD TPASS_0726 - flagellar protein 716 50.65 0 793394..794785 - 463 189025952 flgE TPASS_0727 - flagellar hook protein 717 53.90 0 794856..795317 - 153 189025953 flgD TPASS_0728 - flagellar hook assembly scaffolding protein 718 62.65 +2 795393..797036 - 547 189025954 tap1 TPASS_0729 - treponemal aqueous protein 719 55.37 0 797005..798102 + 365 189025955 - TPASS_0730 - hypothetical protein 720 58.93 +1 798122..798832 + 236 189025956 - TPASS_0731 - hypothetical protein 721 62.03 +2 798797..799744 - 315 189025957 folD TPASS_0732 - methylenetetrahydrofolate dehydrogenase 722 59.24 +1 799840..800499 + 219 189025958 - TPASS_0733 - hypothetical protein 723 57.41 +1 800532..801233 - 233 189025959 deoD TPASS_0734 - purine nucleoside phosphorylase 724 55.11 0 801315..802871 - 518 189025960 gltA TPASS_0735 - glutamate synthase 725 51.84 0 802874..803716 - 280 189025961 hydG TPASS_0736 - hydrogenase, gamma chain 726 52.10 0 803950..805260 + 436 189025962 msmE TPASS_0737 - sugar ABC transporter, periplasmic binding protein 727 58.93 +1 805306..805641 - 111 189025963 - TPASS_0738 - hypothetical protein 728 45.86 -1 805638..806834 - 398 189025964 - TPASS_0739 - hypothetical protein 729 55.38 0 806908..807474 - 188 189025965 - TPASS_0740 - hypothetical protein 730 55.28 0 807602..808216 - 204 189025966 - TPASS_0741 - hypothetical protein 731 57.74 +1 808213..809343 - 376 189025967 obg TPASS_0742 - GTP-binding protein 732 54.17 0 809461..809724 - 87 189025968 rpmA TPASS_0743 - ribosomal protein L27 733 56.88 0 809755..810081 - 108 189025969 - TPASS_0744 - hypothetical protein 734 51.89 0 810094..810411 - 105 189025970 rplU TPASS_0745 - ribosomal protein L21 735 51.07 0 810518..813223 - 901 189025971 - TPASS_0746 - pyruvate, phosphate dikinase 736 50.14 0 813233..814267 - 344 189025972 - TPASS_0747 - hypothetical protein 737 48.26 -1 814356..816392 - 678 189025973 cfpA TPASS_0748 - cytoplasmic filament protein A 738 37.84 -2 816370..816591 - 73 189025974 - TPASS_0749 - hypothetical protein 739 52.23 0 816561..817232 + 223 189025975 - TPASS_0750 - hypothetical protein 740 56.58 0 817269..817982 + 237 189025976 - TPASS_0751 - hypothetical protein/laminin-binding protein 741 54.59 0 818120..819262 - 380 189025977 - TPASS_0752 - hypothetical protein 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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