version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 524 57.23 0 576239..576577 - 112 189025760 - TPASS_0531 - possible V-type ATPase, subunit F 525 53.41 0 577197..578561 - 454 189025761 atpI2 TPASS_0533 - V-type ATPase, subunit I 526 54.87 0 578554..579579 - 341 189025762 - TPASS_0534 - hypothetical protein 527 60.09 +1 579583..579795 - 70 189025763 - TPASS_0535 - hypothetical protein 528 57.96 +1 579936..580337 - 133 189025764 - TPASS_0536 - hypothetical protein 529 56.27 0 580487..581236 - 249 189025765 tpi TPASS_0537 - triosephosphate isomerase 530 53.97 0 581387..582646 - 419 189025766 pgk TPASS_0538 - phosphoglycerate kinase 531 51.35 0 582618..582839 + 73 189025767 - TPASS_0539 - hypothetical protein 532 50.27 0 583120..583491 + 123 189025768 spoIIAA2 TPASS_0540 - anti-sigma F factor antagonist 533 55.10 0 583621..584580 + 319 189025769 era TPASS_0541 - GTP-binding protein 534 53.08 0 584577..586298 - 573 189025770 - TPASS_0542 - pyrophosphate--fructose 6-phosphate 1-phosphotransferase, beta subunit 535 52.05 0 586358..587041 - 227 189025771 ruvA TPASS_0543 - Holliday junction DNA helicase, subunit A 536 50.93 0 587083..588957 - 624 189025772 - TPASS_0544 - hypothetical protein 537 51.17 0 588982..590046 - 354 189025773 mglB1 TPASS_0545 - methylgalactoside ABC transporter, periplasmic galactose-binding protein 538 55.17 0 590131..592131 - 666 189025774 - TPASS_0546 - possible periplasmic serine protease 539 64.37 +2 591843..592973 - 376 189025775 lytB TPASS_0547 - penicillin tolerance protein 540 57.02 0 593117..594433 + 438 189025776 - TPASS_0548 - hypothetical protein 541 55.26 0 594531..596975 + 814 189025777 clpC TPASS_0549 - ATP-dependent Clp protease, subunit C 542 56.18 0 597016..598503 - 495 189025778 thdF TPASS_0550 - thiophene and furan oxidation protein 543 57.12 0 598507..599595 - 362 189025779 - TPASS_0551 - phosphatase 544 57.12 0 599608..600141 - 177 189025780 - TPASS_0552 - hypothetical protein 545 47.69 -1 600385..601596 + 403 189025781 - TPASS_0553 - hypothetical integral membrane protein 546 54.41 0 601631..602299 + 222 189025782 gph2 TPASS_0554 - phosphoglycolate phosphatase 547 54.49 0 602363..603553 - 396 189025783 - TPASS_0555 - possible glutamate/aspartate transporter 548 53.98 0 603776..604768 - 330 189025784 asnA TPASS_0556 - asparagine synthetase 549 51.82 0 604873..605586 + 237 189025785 - TPASS_0557 - hypothetical protein 550 56.55 0 605616..606524 + 302 189025786 - TPASS_0558 - hypothetical integral membrane protein 551 55.39 0 606586..607791 + 401 189025787 - TPASS_0559 - hypothetical protein 552 54.73 0 607844..609829 - 661 189025788 tktA TPASS_0560 - transketolase A 553 59.39 +1 609940..610791 - 283 189025789 - TPASS_0561 - hypothetical protein 554 57.08 0 610962..612098 + 378 189025790 spsE TPASS_0562 - spore coat polysaccharide biosynthesis protein 555 55.80 0 612089..612502 + 137 189025791 - TPASS_0563 - hypothetical protein 556 51.69 0 612499..614535 + 678 189025792 - TPASS_0564 - hypothetical protein 557 50.29 0 614417..615637 - 406 189025793 - TPASS_0565 - hypothetical protein 558 45.50 -1 615648..617135 - 495 189025794 algI TPASS_0566 - alginate O-acetylation protein 559 50.24 0 617167..617787 - 206 189025795 - TPASS_0567 - hypothetical protein 560 54.98 0 617866..618498 - 210 189025796 eda TPASS_0568 - 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase 561 56.52 0 618620..620944 - 774 189025797 - TPASS_0569 - aminopeptidase P 562 56.03 0 620969..621814 - 281 189025798 - TPASS_0570 - hypothetical protein 563 55.71 0 621841..622506 - 221 189025799 - TPASS_0571 - protein Tp70 564 56.23 0 622524..623606 - 360 189025800 - TPASS_0572 - hypothetical protein 565 44.09 -2 623597..623689 + 30 189025801 - TPASS_0573 - hypothetical protein 566 53.95 0 623716..625020 - 434 189025802 - TPASS_0574 - carboxypeptidase, 47 kDa 567 56.01 0 627252..628358 + 368 189025803 prfB TPASS_0576 - peptide chain release factor 2 568 55.99 0 628250..630094 + 614 189025804 - TPASS_0577 - hypothetical protein 569 54.39 0 630101..630988 + 295 189025805 ftsY TPASS_0578 - cell division protein 570 52.77 0 630985..631761 + 258 189025806 - TPASS_0579 - hypothetical protein 571 46.90 -1 631754..633043 + 429 189025807 - TPASS_0580 - hypothetical integral membrane protein 572 46.70 -1 633036..633716 + 226 189025808 - TPASS_0581 - ABC transporter, ATP-binding protein 573 50.81 0 633713..635200 + 495 189025809 - TPASS_0582 - hypothetical integral membrane protein 574 52.38 0 635184..635309 - 41 189025810 - TPASS_0583 - hypothetical protein 575 48.65 0 635296..636705 + 469 189025811 - TPASS_0584 - hypothetical protein 576 54.50 0 636698..638341 + 547 189025812 oppA TPASS_0585 - oligopeptide ABC transporter, periplasmic binding protein 577 53.55 0 638430..641066 + 878 189025813 leuS TPASS_0586 - leucyl-tRNA synthetase 578 54.55 0 641046..641276 - 76 189025814 - TPASS_0587 - hypothetical protein 579 48.24 -1 641303..642067 - 254 189025815 - TPASS_0588 - hypothetical protein 580 49.81 0 642155..642421 - 88 189025816 ptsH TPASS_0589 - phosphocarrier protein HPr 581 49.57 0 642393..642509 - 38 189025817 - TPASS_0590 - hypothetical protein 582 48.12 -1 642466..643425 - 319 189025818 ptsK TPASS_0591 - HPr kinase 583 52.10 0 644188..645690 + 500 189025819 - TPASS_0592 - hypothetical protein 584 55.11 0 645627..647660 + 677 189025820 - TPASS_0593 - hypothetical protein 585 52.22 0 647747..648355 - 202 189025821 - TPASS_0594 - hypothetical protein 586 52.04 0 648383..649018 - 211 189025822 adk TPASS_0595 - adenylate kinase 587 56.33 0 649042..650154 - 370 189025823 pcnB TPASS_0596 - polynucleotide adenylyltransferase 588 50.82 0 650262..652325 - 687 189025824 - TPASS_0598 - hypothetical protein 589 48.10 -1 652362..653018 - 218 189025825 - TPASS_0599 - hypothetical protein 590 48.26 -1 653025..654377 - 450 189025826 - TPASS_0600 - possible zinc protease 591 52.52 0 654374..655525 - 383 189025827 dxr TPASS_0601 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 592 48.50 -1 655501..656364 - 287 189025828 cdsA TPASS_0602 - phosphatidate cytidylyltransferase 593 52.98 0 656361..657047 - 228 189025829 - TPASS_0603 - hypothetical protein 594 52.90 0 657053..657604 - 183 189025830 - TPASS_0604 - ribosome recycling factor 595 55.90 0 657708..658580 - 290 189025831 tsf TPASS_0605 - translation elongation factor TS 596 50.00 0 658671..659546 - 291 189025832 rpsB TPASS_0606 - ribosomal protein S2 597 54.42 0 659515..659661 - 48 189025833 - TPASS_0607 - hypothetical protein 598 58.02 +1 659911..660801 - 296 189025834 - TPASS_0608 - hypothetical protein 599 59.29 +1 661119..662690 + 523 189025835 asnS TPASS_0609 - asparaginyl-tRNA synthetase 600 54.85 0 662700..664781 + 693 189025836 tprH TPASS_0610 - protein TprH 601 54.74 0 664923..665702 + 259 189025837 - TPASS_0611 - ABC transporter, ATP-binding protein 602 52.01 0 665783..667222 + 479 189025838 - TPASS_0612 - hypothetical protein 603 52.83 0 667249..668397 + 382 189025839 - TPASS_0613 - hypothetical protein 604 54.40 0 668394..669608 + 404 189025840 nifS1 TPASS_0614 - nitrogen fixation protein 605 54.05 0 669659..670102 + 147 189025841 nifU TPASS_0615 - nitrogen fixation protein 606 55.16 0 670123..670887 + 254 189025842 rpiA TPASS_0616 - ribose 5-phosphate isomerase 607 59.14 +1 670914..671192 - 92 189025843 - TPASS_0617 - hypothetical protein 608 60.83 +1 671288..671647 - 119 189025844 - TPASS_0618 - hypothetical protein 609 60.76 +1 671703..672515 - 270 189025845 - TPASS_0619 - hypothetical protein 610 57.32 +1 672512..674341 - 609 189025846 tprI TPASS_0620 - protein TprI 611 56.43 0 674399..676675 - 758 189025847 tprJ TPASS_0621 - protein TprJ 612 55.39 0 676735..678516 - 593 189025848 - TPASS_0622 - hypothetical protein 613 60.13 +1 677933..680272 + 779 189025849 dniR TPASS_0623 - membrane-bound lytic murein transglycosylase D 614 55.00 0 680276..681706 + 476 189025850 - TPASS_0624 - hypothetical protein 615 49.27 0 681706..682458 + 250 189025851 - TPASS_0625 - hypothetical protein 616 49.15 0 682455..683630 + 391 189025852 - TPASS_0626 - possible exonuclease 617 46.56 -1 683627..686770 + 1047 189025853 sbcC TPASS_0627 - exonuclease 618 51.55 0 686767..688248 + 493 189025854 - TPASS_0628 - hypothetical protein 619 56.36 0 688419..689243 + 274 189025855 - TPASS_0629 - hypothetical protein 620 49.67 0 689413..690324 + 303 189025856 cheR TPASS_0630 - chemotaxis protein methyltransferase 621 53.38 0 690371..691582 + 403 189025857 cheB TPASS_0631 - protein-glutamate methylesterase 622 56.61 0 691687..692700 + 337 189025858 trpS TPASS_0632 - tryptophanyl-tRNA synthetase 623 53.20 0 692841..693716 + 291 189025859 msrA TPASS_0633 - protein-methionine-S-oxide reductase 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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