version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 495 46.70 -1 537598..538899 + 433 189025731 rodA TPASS_0501 - rod shape-determining protein 496 50.61 0 538925..539821 + 298 189025732 - TPASS_0502 - hypothetical protein 497 53.90 0 539800..540363 + 187 189025733 - TPASS_0503 - hypothetical protein 498 60.28 +1 540345..540485 + 46 189025734 - TPASS_0504 - hypothetical protein 499 53.63 0 540494..541828 - 444 189025735 hxk TPASS_0505 - hexokinase 500 54.25 0 542563..543891 + 442 189025736 tig TPASS_0506 - trigger factor 501 52.78 0 543884..544495 + 203 189025737 clpP1 TPASS_0507 - ATP-dependent Clp protease proteolytic component 502 48.56 0 544482..545729 + 415 189025738 clpX TPASS_0508 - ATP-dependent Clp protease subunit X 503 51.32 0 545826..546392 + 188 189025739 ahpC TPASS_0509 - alkyl hydroperoxide reductase 504 52.20 0 546573..548390 - 605 189025740 lepA TPASS_0510 - GTP-binding membrane protein 505 49.76 0 548433..549059 + 208 189025741 carD TPASS_0511 - transcription factor 506 57.69 +1 549056..550303 + 415 189025742 - TPASS_0512 - hypothetical protein 507 50.96 0 550377..551777 + 466 189025743 trkA TPASS_0513 - K+ transport protein 508 47.31 -1 551891..554773 + 960 189025744 uvrA TPASS_0514 - excinuclease ABC, subunit A 509 42.20 -2 554770..557745 + 991 189025745 - TPASS_0515 - hypothetical protein 510 41.87 -2 557759..559339 - 526 189025746 mviN TPASS_0516 - virulence factor 511 46.87 -1 559336..559926 - 196 189025747 ruvC TPASS_0517 - Holliday junction nuclease, subunit C 512 49.21 0 559908..560600 - 230 189025748 - TPASS_0518 - hypothetical protein 513 42.99 -2 560597..561973 - 458 189025749 atoC TPASS_0519 - response regulatory protein 514 49.61 0 563168..564439 - 423 189025750 - TPASS_0521 - possible DNA polymerase III, gamma and tau subunits 515 45.62 -1 564450..564929 - 159 189025751 - TPASS_0522 - hypothetical protein 516 52.90 0 564926..566080 - 384 189025752 murG TPASS_0523 - UDP-N-glucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase 517 52.04 0 566084..568729 - 881 189025753 lon2 TPASS_0524 - ATP-dependent protease LA 518 49.82 0 568865..569428 + 187 189025754 efp TPASS_0525 - translation elongation factor P 519 49.48 0 569576..571582 + 668 189025755 hrpA TPASS_0526 - ATP-dependent helicase 520 52.70 0 571630..572259 - 209 189025756 atpD2 TPASS_0527 - V-type ATPase, subunit D 521 51.98 0 572354..573796 - 480 189025757 atpB2 TPASS_0528 - V-type ATPase, subunit B 522 54.68 0 573793..575610 - 605 189025758 atpA2 TPASS_0529 - V-type ATPase, subunit A 523 55.50 0 575607..576233 - 208 189025759 - TPASS_0530 - possible V-type ATPase, subunit E 524 57.23 0 576239..576577 - 112 189025760 - TPASS_0531 - possible V-type ATPase, subunit F 525 53.41 0 577197..578561 - 454 189025761 atpI2 TPASS_0533 - V-type ATPase, subunit I 526 54.87 0 578554..579579 - 341 189025762 - TPASS_0534 - hypothetical protein 527 60.09 +1 579583..579795 - 70 189025763 - TPASS_0535 - hypothetical protein 528 57.96 +1 579936..580337 - 133 189025764 - TPASS_0536 - hypothetical protein 529 56.27 0 580487..581236 - 249 189025765 tpi TPASS_0537 - triosephosphate isomerase 530 53.97 0 581387..582646 - 419 189025766 pgk TPASS_0538 - phosphoglycerate kinase 531 51.35 0 582618..582839 + 73 189025767 - TPASS_0539 - hypothetical protein 532 50.27 0 583120..583491 + 123 189025768 spoIIAA2 TPASS_0540 - anti-sigma F factor antagonist 533 55.10 0 583621..584580 + 319 189025769 era TPASS_0541 - GTP-binding protein 534 53.08 0 584577..586298 - 573 189025770 - TPASS_0542 - pyrophosphate--fructose 6-phosphate 1-phosphotransferase, beta subunit 535 52.05 0 586358..587041 - 227 189025771 ruvA TPASS_0543 - Holliday junction DNA helicase, subunit A 536 50.93 0 587083..588957 - 624 189025772 - TPASS_0544 - hypothetical protein 537 51.17 0 588982..590046 - 354 189025773 mglB1 TPASS_0545 - methylgalactoside ABC transporter, periplasmic galactose-binding protein 538 55.17 0 590131..592131 - 666 189025774 - TPASS_0546 - possible periplasmic serine protease 539 64.37 +2 591843..592973 - 376 189025775 lytB TPASS_0547 - penicillin tolerance protein 540 57.02 0 593117..594433 + 438 189025776 - TPASS_0548 - hypothetical protein 541 55.26 0 594531..596975 + 814 189025777 clpC TPASS_0549 - ATP-dependent Clp protease, subunit C 542 56.18 0 597016..598503 - 495 189025778 thdF TPASS_0550 - thiophene and furan oxidation protein 543 57.12 0 598507..599595 - 362 189025779 - TPASS_0551 - phosphatase 544 57.12 0 599608..600141 - 177 189025780 - TPASS_0552 - hypothetical protein 545 47.69 -1 600385..601596 + 403 189025781 - TPASS_0553 - hypothetical integral membrane protein 546 54.41 0 601631..602299 + 222 189025782 gph2 TPASS_0554 - phosphoglycolate phosphatase 547 54.49 0 602363..603553 - 396 189025783 - TPASS_0555 - possible glutamate/aspartate transporter 548 53.98 0 603776..604768 - 330 189025784 asnA TPASS_0556 - asparagine synthetase 549 51.82 0 604873..605586 + 237 189025785 - TPASS_0557 - hypothetical protein 550 56.55 0 605616..606524 + 302 189025786 - TPASS_0558 - hypothetical integral membrane protein 551 55.39 0 606586..607791 + 401 189025787 - TPASS_0559 - hypothetical protein 552 54.73 0 607844..609829 - 661 189025788 tktA TPASS_0560 - transketolase A 553 59.39 +1 609940..610791 - 283 189025789 - TPASS_0561 - hypothetical protein 554 57.08 0 610962..612098 + 378 189025790 spsE TPASS_0562 - spore coat polysaccharide biosynthesis protein 555 55.80 0 612089..612502 + 137 189025791 - TPASS_0563 - hypothetical protein 556 51.69 0 612499..614535 + 678 189025792 - TPASS_0564 - hypothetical protein 557 50.29 0 614417..615637 - 406 189025793 - TPASS_0565 - hypothetical protein 558 45.50 -1 615648..617135 - 495 189025794 algI TPASS_0566 - alginate O-acetylation protein 559 50.24 0 617167..617787 - 206 189025795 - TPASS_0567 - hypothetical protein 560 54.98 0 617866..618498 - 210 189025796 eda TPASS_0568 - 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase 561 56.52 0 618620..620944 - 774 189025797 - TPASS_0569 - aminopeptidase P 562 56.03 0 620969..621814 - 281 189025798 - TPASS_0570 - hypothetical protein 563 55.71 0 621841..622506 - 221 189025799 - TPASS_0571 - protein Tp70 564 56.23 0 622524..623606 - 360 189025800 - TPASS_0572 - hypothetical protein 565 44.09 -2 623597..623689 + 30 189025801 - TPASS_0573 - hypothetical protein 566 53.95 0 623716..625020 - 434 189025802 - TPASS_0574 - carboxypeptidase, 47 kDa 567 56.01 0 627252..628358 + 368 189025803 prfB TPASS_0576 - peptide chain release factor 2 568 55.99 0 628250..630094 + 614 189025804 - TPASS_0577 - hypothetical protein 569 54.39 0 630101..630988 + 295 189025805 ftsY TPASS_0578 - cell division protein 570 52.77 0 630985..631761 + 258 189025806 - TPASS_0579 - hypothetical protein 571 46.90 -1 631754..633043 + 429 189025807 - TPASS_0580 - hypothetical integral membrane protein 572 46.70 -1 633036..633716 + 226 189025808 - TPASS_0581 - ABC transporter, ATP-binding protein 573 50.81 0 633713..635200 + 495 189025809 - TPASS_0582 - hypothetical integral membrane protein 574 52.38 0 635184..635309 - 41 189025810 - TPASS_0583 - hypothetical protein 575 48.65 0 635296..636705 + 469 189025811 - TPASS_0584 - hypothetical protein 576 54.50 0 636698..638341 + 547 189025812 oppA TPASS_0585 - oligopeptide ABC transporter, periplasmic binding protein 577 53.55 0 638430..641066 + 878 189025813 leuS TPASS_0586 - leucyl-tRNA synthetase 578 54.55 0 641046..641276 - 76 189025814 - TPASS_0587 - hypothetical protein 579 48.24 -1 641303..642067 - 254 189025815 - TPASS_0588 - hypothetical protein 580 49.81 0 642155..642421 - 88 189025816 ptsH TPASS_0589 - phosphocarrier protein HPr 581 49.57 0 642393..642509 - 38 189025817 - TPASS_0590 - hypothetical protein 582 48.12 -1 642466..643425 - 319 189025818 ptsK TPASS_0591 - HPr kinase 583 52.10 0 644188..645690 + 500 189025819 - TPASS_0592 - hypothetical protein 584 55.11 0 645627..647660 + 677 189025820 - TPASS_0593 - hypothetical protein 585 52.22 0 647747..648355 - 202 189025821 - TPASS_0594 - hypothetical protein 586 52.04 0 648383..649018 - 211 189025822 adk TPASS_0595 - adenylate kinase 587 56.33 0 649042..650154 - 370 189025823 pcnB TPASS_0596 - polynucleotide adenylyltransferase 588 50.82 0 650262..652325 - 687 189025824 - TPASS_0598 - hypothetical protein 589 48.10 -1 652362..653018 - 218 189025825 - TPASS_0599 - hypothetical protein 590 48.26 -1 653025..654377 - 450 189025826 - TPASS_0600 - possible zinc protease 591 52.52 0 654374..655525 - 383 189025827 dxr TPASS_0601 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 592 48.50 -1 655501..656364 - 287 189025828 cdsA TPASS_0602 - phosphatidate cytidylyltransferase 593 52.98 0 656361..657047 - 228 189025829 - TPASS_0603 - hypothetical protein 594 52.90 0 657053..657604 - 183 189025830 - TPASS_0604 - ribosome recycling factor 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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