version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 315 61.67 +2 335795..335974 - 59 189025551 - TPASS_0318 - hypothetical protein 316 54.43 0 336003..337064 + 353 189025552 tmpC TPASS_0319 - membrane lipoprotein TmpC 317 58.33 +1 337074..337229 + 51 189025553 - TPASS_0320 - hypothetical protein 318 56.87 0 337305..338906 + 533 189025554 rbsA2 TPASS_0321 - ribose/galactose ABC transporter, ATP-binding protein 319 55.36 0 338816..340018 + 400 189025555 rbsC1 TPASS_0322 - ribose/galactose ABC transporter, permease protein 320 53.10 0 340015..340965 + 316 189025556 rbsC2 TPASS_0323 - ribose/galactose ABC transporter, permease protein 321 55.83 0 341069..342526 + 485 189025557 - TPASS_0324 - hypothetical protein 322 54.53 0 342508..345474 + 988 189025558 - TPASS_0325 - hypothetical protein 323 52.19 0 345456..348017 + 853 189025559 - TPASS_0326 - outer membrane protein 324 51.06 0 348074..348592 + 172 189025560 ompH TPASS_0327 - cationic outer membrane protein 325 54.09 0 348648..351350 + 900 189025561 mutS TPASS_0328 - DNA mismatch repair protein MutS 326 54.38 0 351468..353192 + 574 189025562 glyA TPASS_0329 - serine hydroxymethyltransferase 327 45.91 -1 353166..354962 - 598 189025563 - TPASS_0330 - possible cell division protein 328 55.21 0 355192..356658 - 488 189025564 gnd TPASS_0331 - phosphogluconate dehydrogenase 329 50.79 0 356674..356799 + 41 189025565 - TPASS_0332 - hypothetical protein 330 50.22 0 356837..357529 + 230 189025566 - TPASS_0333 - hypothetical protein 331 55.50 0 357554..358771 + 405 189025567 - TPASS_0334 - hypothetical protein 332 57.83 +1 358768..359310 - 180 189025568 - TPASS_0335 - hypothetical protein 333 51.91 0 359153..360853 + 566 189025569 - TPASS_0336 - possible protein ComE 334 48.02 -1 360834..361691 + 285 189025570 ksgA TPASS_0337 - dimethyladenosine transferase 335 49.28 0 361709..362197 + 162 189025571 - TPASS_0338 - hypothetical protein 336 48.39 -1 362209..363204 + 331 189025572 - TPASS_0339 - hypothetical protein 337 46.91 -1 363190..364662 - 490 189025573 folC TPASS_0340 - folylpolyglutamate synthetase 338 49.79 0 364681..366126 + 481 189025574 murC TPASS_0341 - UDP-N-acetylmuramate--alanine ligase 339 48.31 -1 366247..366807 + 186 189025575 cmk TPASS_0342 - cytidylate kinase 340 49.52 0 366801..367634 + 277 189025576 - TPASS_0343 - possible A/G-specific adenine glycosylase 341 49.66 0 367639..371061 - 1140 189025577 trcF TPASS_0344 - transcription-repair coupling factor 342 50.73 0 371214..372305 + 363 189025578 mraY TPASS_0345 - phospho-N-acetylmuramoyl-pentapeptide-transferase 343 54.84 0 372462..373163 + 233 189025579 - TPASS_0346 - hypothetical protein 344 57.40 +1 373132..373962 + 276 189025580 - TPASS_0347 - hypothetical protein 345 59.86 +1 373696..375105 - 469 189025581 - TPASS_0348 - hypothetical protein 346 57.63 +1 375075..375605 - 176 189025582 slyD TPASS_0349 - peptidyl-prolyl cis-trans isomerase, FKBP-type 347 55.71 0 375819..377105 + 428 189025583 proA TPASS_0350 - gamma-glutamyl phosphate reductase 348 55.89 0 377102..377992 + 296 189025584 proB TPASS_0351 - glutamate 5-kinase 349 52.71 0 378124..378381 + 85 189025585 - TPASS_0352 - hypothetical protein 350 60.00 +1 378378..378887 - 169 189025586 rnhA TPASS_0353 - ribonuclease H 351 47.21 -1 379150..379776 + 208 189025587 tmk TPASS_0354 - thymidylate kinase 352 47.66 -1 379743..380126 - 127 189025588 - TPASS_0355 - hypothetical protein 353 47.80 -1 380331..380648 + 105 189025589 - TPASS_0356 - possible RNA-binding protein 354 58.84 +1 380750..381490 + 246 189025590 birA TPASS_0357 - biotin--acetyl-CoA-carboxylase ligase 355 51.87 0 381495..383075 - 526 189025591 - TPASS_0358 - hypothetical protein 356 52.52 0 383087..383722 - 211 189025592 - TPASS_0359 - hypothetical protein 357 54.80 0 383933..384109 + 58 189025593 - TPASS_0360 - hypothetical protein 358 57.60 +1 384106..384954 - 282 189025594 - TPASS_0361 - possible lysophosphatidic acid acyltransferase 359 59.92 +1 385030..385266 + 78 189025595 rpmB TPASS_0362 - ribosomal protein L28 360 54.24 0 385758..388196 + 812 189025596 cheA TPASS_0363 - chemotaxis histidine kinase 361 52.12 0 388190..389557 + 455 189025597 cheW1 TPASS_0364 - purine-binding chemotaxis protein 362 52.26 0 389579..390043 + 154 189025598 cheX TPASS_0365 - chemotaxis protein 363 48.28 -1 390056..390490 + 144 189025599 cheY TPASS_0366 - chemotaxis response regulator 364 52.44 0 390794..393619 + 941 189025600 - TPASS_0367 - possible chromosome segregation protein 365 59.23 +1 393619..393954 + 111 189025601 - TPASS_0368 - hypothetical protein 366 59.06 +1 393951..395501 + 516 189025602 - TPASS_0369 - hypothetical protein 367 50.60 0 395569..395985 - 138 189025603 - TPASS_0370 - hypothetical protein 368 58.11 +1 395959..396834 + 291 189025604 - TPASS_0371 - hypothetical protein 369 55.84 0 396956..397546 + 196 189025605 ctc TPASS_0372 - general stress protein 370 56.90 0 397606..399039 + 477 189025606 - TPASS_0373 - hypothetical protein 371 54.29 0 398975..401350 + 791 189025607 - TPASS_0374 - hypothetical protein 372 50.00 0 401508..401717 + 69 189025608 - TPASS_0375 - hypothetical protein 373 53.31 0 402033..402938 - 301 189025609 - TPASS_0376 - hypothetical protein 374 55.56 0 403007..403132 + 41 189025610 - TPASS_0377 - hypothetical protein 375 53.02 0 403129..403509 + 126 189025611 - TPASS_0378 - possible flagellar protein 376 51.76 0 403584..406334 - 916 189025612 secA TPASS_0379 - preprotein translocase subunit 377 54.81 0 406441..408261 - 606 189025613 - TPASS_0380 - possible DNA repair helicase 378 53.97 0 408399..409115 - 238 189025614 - TPASS_0381 - hypothetical protein 379 58.54 +1 409199..409321 + 40 189025615 - TPASS_0382 - hypothetical protein 380 58.22 +1 409349..409798 + 149 189025616 - TPASS_0383 - hypothetical protein 381 59.56 +1 409795..410934 + 379 189025617 - TPASS_0384 - hypothetical protein 382 54.93 0 410947..411321 + 124 189025618 - TPASS_0385 - hypothetical protein 383 52.03 0 411305..412684 + 459 189025619 murF TPASS_0386 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine 384 42.42 -2 412681..413835 + 384 189025620 ftsW TPASS_0387 - cell division protein 385 45.83 -1 413813..414628 + 271 189025621 ftsQ TPASS_0388 - cell division protein 386 49.32 0 414641..415885 + 414 189025622 ftsA TPASS_0389 - cell division protein 387 50.28 0 415931..417187 + 418 189025623 ftsZ TPASS_0390 - cell division protein 388 50.38 0 417184..418104 + 306 189025624 codV TPASS_0391 - integrase/recombinase 389 50.62 0 417887..418846 + 319 189025625 - TPASS_0392 - hypothetical protein 390 49.72 0 418843..419751 + 302 189025626 smf TPASS_0393 - protein Smf 391 47.86 -1 419784..421979 + 731 189025627 topA TPASS_0394 - DNA topoisomerase I 392 51.79 0 421972..422865 + 297 189025628 xprB TPASS_0395 - integrase/recombinase 393 48.18 -1 423013..423423 + 136 189025629 flgB TPASS_0396 - flagellar basal-body rod protein 394 50.77 0 423508..423897 + 129 189025630 flgC TPASS_0397 - flagellar basal-body rod protein 395 48.00 -1 423953..424327 + 124 189025631 fliE TPASS_0398 - flagellar hook-basal body complex protein 396 50.12 0 424444..426147 + 567 189025632 fliF TPASS_0399 - flagellar basal-body M ring protein 397 45.51 -1 426152..427210 + 352 189025633 fliG2 TPASS_0400 - flagellar motor switch protein 398 51.08 0 427258..428187 + 309 189025634 fliH TPASS_0401 - flagellar assembly protein 399 55.36 0 428215..429558 + 447 189025635 fliI TPASS_0402 - flagellum-specific ATP synthase 400 53.64 0 429587..430039 + 150 189025636 - TPASS_0403 - possible flagellar protein 401 54.68 0 430036..430569 - 177 189025637 - TPASS_0404 - hypothetical protein 402 48.22 -1 430566..431015 - 149 189025638 - TPASS_0405 - possible protein McbG 403 53.16 0 431206..432012 + 268 189025639 murI TPASS_0406 - glutamate racemase 404 56.15 0 432140..432814 + 224 189025640 gph1 TPASS_0407 - phosphoglycolate phosphatase 405 50.35 0 432893..436147 + 1084 189025641 - TPASS_0408 - hypothetical protein 406 52.15 0 436187..436372 + 61 189025642 - TPASS_0409 - hypothetical protein 407 53.60 0 436637..438388 + 583 189025643 secD TPASS_0410 - protein-export membrane protein 408 54.24 0 438385..439647 + 420 189025644 secF TPASS_0411 - protein-export membrane protein 409 47.39 -1 439723..440028 - 101 189025645 - TPASS_0412 - hypothetical protein 410 54.50 0 440047..441945 - 632 189025646 - TPASS_0413 - phosphoglucomutase 411 56.19 0 442048..443403 + 451 189025647 dagA TPASS_0414 - D-alanine glycine permease 412 59.36 +1 443384..443917 + 177 189025648 - TPASS_0415 - hypothetical protein 413 55.04 0 443864..445222 - 452 189025649 ffh TPASS_0416 - signal recognition particle protein 414 57.38 +1 445215..446894 - 559 189025650 cutE TPASS_0417 - apolipoprotein N-acyltransferase 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0