version 1.0
Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 213 57.62 +1 219152..219814 + 220 189025449 grpE TPASS_0215 - chaperone protein GrpE 214 51.57 0 219930..221837 + 635 189025450 dnaK TPASS_0216 - heat shock protein 70 215 46.39 -1 223384..224853 + 489 189025451 - TPASS_0218 - possible sigma factor SigB regulation protein 216 41.67 -2 224857..227004 + 715 189025452 - TPASS_0219 - possible sigma factor SigB regulation protein 217 48.62 0 227033..227359 + 108 189025453 spoIIAA1 TPASS_0220 - anti-sigma F factor antagonist 218 55.94 0 227360..228142 + 260 189025454 - TPASS_0221 - possible D,D-carboxypeptidase 219 52.57 0 228152..228598 + 148 189025455 - TPASS_0222 - hypothetical protein 220 53.29 0 228866..230173 + 435 189025456 - TPASS_0223 - aspartate aminotransferase TpAAT 221 48.57 0 230210..230314 + 34 189025457 - TPASS_0224 - hypothetical protein 222 51.42 0 230360..231100 + 246 189025458 - TPASS_0225 - leucine-rich repeat protein TpLRR 223 49.05 0 236252..236938 - 228 189025459 - TPASS_0226 - hypothetical protein 224 52.86 0 236991..237758 - 255 189025460 - TPASS_0227 - cobalt ABC transporter, ATP-binding protein 225 55.64 0 237825..238640 - 271 189025461 - TPASS_0228 - possible biotin synthase 226 55.52 0 238584..239417 + 277 189025462 - TPASS_0229 - DNA polymerase, bacteriophage-type 227 56.33 0 239422..241395 + 657 189025463 priA TPASS_0230 - primosomal protein N 228 54.99 0 241496..242146 + 216 189025464 - TPASS_0231 - hypothetical protein 229 55.56 0 242246..242362 + 38 189025465 - TPASS_0232 - hypothetical protein 230 45.05 -1 242393..242938 + 181 189025466 - TPASS_0233 - possible anti-sigma F factor antagonist 231 49.71 0 243173..243343 + 56 189025467 rpmG TPASS_0234 - ribosomal protein L33 232 53.89 0 243493..243672 + 59 189025468 secE TPASS_0235 - preprotein translocase subunit 233 52.87 0 243682..244239 + 185 189025469 nusG TPASS_0236 - transcription antitermination protein 234 54.20 0 244346..244786 + 146 189025470 rplK TPASS_0237 - ribosomal protein L11 235 53.74 0 244783..245463 + 226 189025471 rplA TPASS_0238 - ribosomal protein L1 236 54.70 0 245465..246007 + 180 189025472 rplJ TPASS_0239 - ribosomal protein L10 237 52.05 0 246116..246505 + 129 189025473 rplL TPASS_0240 - ribosomal protein L7/L12 238 49.93 0 246768..250304 + 1178 189025474 rpoB TPASS_0241 - DNA-directed RNA polymerase, beta subunit 239 50.60 0 250317..254567 + 1416 189025475 rpoC TPASS_0242 - DNA-directed RNA polymerase, beta subunit 240 54.40 0 254670..255044 + 124 189025476 rpsL TPASS_0243 - ribosomal protein S12 241 54.99 0 255066..255536 + 156 189025477 rpsG TPASS_0244 - ribosomal protein S7 242 52.00 0 255560..259015 + 1151 189025478 - TPASS_0245 - hypothetical protein 243 46.49 -1 259161..260954 + 597 189025479 - TPASS_0246 - hypothetical protein 244 48.23 -1 261005..262078 + 357 189025480 amiA TPASS_0247 - N-acetylmuramoyl-L-alanine amidase 245 56.54 0 262145..262549 + 134 189025481 - TPASS_0248 - hypothetical protein 246 54.42 0 262628..263680 + 350 189025482 flaA1 TPASS_0249 - flagellar filament outer layer protein 247 54.82 0 263731..263958 + 75 189025483 - TPASS_0250a - hypothetical protein 248 55.90 0 263793..264080 + 95 189025484 rpsT TPASS_0250b - ribosomal protein S20 249 54.72 0 264112..264429 + 105 189025485 - TPASS_0251 - DNA-binding protein II 250 54.42 0 264419..266059 + 546 189025486 - TPASS_0252 - possible apolipoprotein N-acyltransferase 251 51.93 0 266050..266463 + 137 189025487 - TPASS_0253 - hypothetical protein 252 48.97 0 266700..268259 + 519 189025488 rho TPASS_0254 - transcription termination factor Rho 253 49.02 0 268378..268581 + 67 189025489 rpmE TPASS_0255 - ribosomal protein L31 254 47.77 -1 268626..269276 + 216 189025490 pgsA TPASS_0256 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 255 48.27 -1 269373..270443 + 356 189025491 glpQ TPASS_0257 - glycerophosphoryldiester phosphodiesterase 256 52.88 0 270509..271219 - 236 189025492 - TPASS_0258 - hypothetical protein 257 53.76 0 271298..271909 + 203 189025493 - TPASS_0259 - hypothetical protein 258 56.94 0 272040..273386 - 448 189025494 - TPASS_0260 - hypothetical protein 259 54.50 0 273501..274544 + 347 189025495 - TPASS_0261 - possible catabolite gene activator 260 51.85 0 274522..275196 + 224 189025496 crp TPASS_0262 - catabolite gene activator 261 57.98 +1 275211..276995 + 594 189025497 - TPASS_0263 - hypothetical protein 262 56.77 0 277000..277656 + 218 189025498 deoC TPASS_0264 - deoxyribose-phosphate aldolase 263 54.90 0 278088..279455 - 455 189025499 braC TPASS_0265 - amino acid ABC transporter, permease protein 264 53.17 0 279506..279631 + 41 189025500 - TPASS_0266 - hypothetical protein 265 51.37 0 284740..285105 + 121 189025501 - TPASS_0267 - hypothetical protein 266 58.26 +1 285102..285755 + 217 189025502 - TPASS_0268 - hypothetical protein 267 50.38 0 285765..287213 + 482 189025503 - TPASS_0269 - hypothetical protein 268 54.84 0 287287..288723 + 478 189025504 pcnA TPASS_0270 - polynucleotide adenylyltransferase 269 53.13 0 288720..289694 - 324 189025505 parB TPASS_0271 - chromosome partitioning protein 270 48.16 -1 289681..290442 - 253 189025506 parA TPASS_0272 - chromosome partitioning protein 271 53.54 0 290575..291366 + 263 189025507 - TPASS_0273 - hypothetical protein 272 56.09 0 291404..291904 - 166 189025508 - TPASS_0274 - possible deoxycytidylate deaminase 273 50.93 0 291993..292742 - 249 189025509 - TPASS_0275 - possible UDP-N-acetyl-D-mannosamine transferase 274 56.72 0 292721..293605 - 294 189025510 - TPASS_0276 - hypothetical protein 275 50.48 0 293778..295124 - 448 189025511 ctp TPASS_0277 - carboxyl-terminal protease 276 61.24 +1 295252..295380 + 42 189025512 - TPASS_0278 - hypothetical protein 277 55.25 0 295426..298017 + 863 189025513 rpsA TPASS_0279 - ribosomal protein S1 278 58.91 +1 298014..298142 + 42 189025514 - TPASS_0280 - hypothetical protein 279 58.14 +1 298159..298287 + 42 189025515 - TPASS_0281 - hypothetical protein 280 59.44 +1 298280..298999 + 239 189025516 - TPASS_0282 - hypothetical protein 281 51.67 0 299177..299656 + 159 189025517 kdtB TPASS_0283 - lipopolysaccharide core biosynthesis protein 282 54.55 0 299761..300420 + 219 189025518 - TPASS_0284 - hypothetical protein 283 48.80 0 300360..301439 + 359 189025519 - TPASS_0285 - hypothetical protein 284 48.09 -1 301411..301776 + 121 189025520 - TPASS_0286 - hypothetical protein 285 45.51 -1 301743..302366 + 207 189025521 - TPASS_0287 - hypothetical protein 286 52.32 0 302366..303313 + 315 189025522 spsF TPASS_0288 - spore coat polysaccharide biosynthesis protein F 287 48.10 -1 303336..304940 + 534 189025523 - TPASS_0289 - hypothetical protein 288 46.40 -1 304995..305828 + 277 189025524 - TPASS_0290 - hypothetical protein 289 50.68 0 305865..306746 + 293 189025525 - TPASS_0291 - hypothetical protein 290 49.84 0 306737..307990 + 417 189025526 tpn50 TPASS_0292 - outer membrane protein TpN50 291 55.37 0 308002..308178 + 58 189025527 - TPASS_0293 - hypothetical protein 292 47.31 -1 308156..309421 + 421 189025528 prs TPASS_0294 - phosphoribosyl pyrophosphate synthetase 293 52.53 0 309440..310684 + 414 189025529 xylB TPASS_0295 - carhohydrate kinase 294 51.89 0 310770..311405 + 211 189025530 - TPASS_0296 - hypothetical protein 295 53.38 0 311369..312181 + 270 189025531 - TPASS_0297 - hypothetical protein 296 54.84 0 312314..313345 + 343 189025532 tpn38b TPASS_0298 - exported protein TpN38b 297 64.44 +2 313342..313566 + 74 189025533 - TPASS_0299 - hypothetical protein 298 53.38 0 313551..315101 + 516 189025534 rbsA1 TPASS_0300 - ribose/galactose ABC transporter, ATP-binding protein 299 50.79 0 315098..316231 + 377 189025535 - TPASS_0301 - hypothetical integral membrane protein 300 55.41 0 316222..317163 + 313 189025536 - TPASS_0302 - hypothetical integral membrane protein 301 57.52 +1 317150..319096 - 648 189025537 mutL TPASS_0303 - DNA mismatch repair protein MutL 302 56.27 0 319109..322225 - 1038 189025538 - TPASS_0304 - hypothetical protein 303 58.25 +1 322152..323885 + 577 189025539 pyrG TPASS_0305 - CTP synthase 304 53.66 0 324050..324664 + 204 189025540 rpsD TPASS_0306 - ribosomal protein S4 305 55.39 0 324751..325779 + 342 189025541 - TPASS_0307 - hypothetical protein 306 56.52 0 325754..326719 + 321 189025542 hisJ TPASS_0308 - amino acid ABC transporter, periplasmic binding protein 307 57.14 0 326785..327603 + 272 189025543 - TPASS_0309 - amino acid ABC transporter, periplasmic binding protein 308 59.11 +1 327572..327955 + 127 189025544 - TPASS_0310 - hypothetical protein 309 55.56 0 327934..328077 - 47 189025545 - TPASS_0311 - hypothetical protein 310 60.75 +1 328061..329074 + 337 189025546 - TPASS_0312 - hypothetical protein 311 56.75 0 329165..331453 + 762 189025547 tprE TPASS_0313 - protein TprE 312 59.18 +1 331510..331656 - 48 189025548 - TPASS_0314 - hypothetical protein 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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