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Treponema pallidum subsp. pallidum SS14, complete genome - 1..1139457 1028 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 929 56.34 0 1026165..1026629 - 154 189026165 - TPASS_0942 - hypothetical protein 930 51.23 0 1026635..1027081 - 148 189026166 fliS TPASS_0943 - flagellar protein 931 53.20 0 1027130..1028302 - 390 189026167 - TPASS_0944 - hypothetical protein 932 54.34 0 1028473..1029129 - 218 189026168 cfxE TPASS_0945 - ribulose-phosphate 3-epimerase 933 57.25 +1 1029281..1029949 + 222 189026169 gidB TPASS_0946 - glucose-inhibited division protein B 934 52.47 0 1029994..1030641 - 215 189026170 cyp TPASS_0947 - peptidyl-prolyl cis-trans isomerase, cyclophilin-binding 935 51.44 0 1030638..1031333 - 231 189026171 jag TPASS_0948 - spoIIIJ-associated protein 936 51.30 0 1031349..1033346 - 665 189026172 - TPASS_0949 - membrane protein 937 55.79 0 1033622..1033906 - 94 189026173 - TPASS_0950 - hypothetical protein 938 59.62 +1 1033910..1034065 - 51 189026174 rpmH TPASS_0951 - ribosomal protein L34 939 48.94 0 1034185..1035222 - 345 189026175 - TPASS_0952 - possible lipase 940 56.09 0 1035304..1036494 - 396 189026176 traB TPASS_0953 - pheromone shutdown protein 941 53.38 0 1036581..1038017 - 478 189026177 - TPASS_0954 - hypothetical protein 942 53.85 0 1038089..1038361 - 90 189026178 - TPASS_0955 - hypothetical protein 943 56.07 0 1038457..1039428 + 323 189026179 - TPASS_0956 - hypothetical protein 944 50.15 0 1039519..1040547 + 342 189026180 tp33 TPASS_0957 - protein Tp33 945 52.66 0 1040579..1042477 + 632 189026181 dctM TPASS_0958 - dicarboxylate transporter 946 54.36 0 1042546..1042935 - 129 189026182 - TPASS_0959 - hypothetical protein 947 52.96 0 1042947..1043741 - 264 189026183 flgG1 TPASS_0960 - flagellar basal-body rod protein 948 47.18 -1 1043817..1044632 - 271 189026184 flgG2 TPASS_0961 - flagellar basal-body rod protein 949 50.77 0 1044718..1045950 - 410 189026185 - TPASS_0962 - hypothetical integral membrane protein 950 52.36 0 1046061..1047290 - 409 189026186 - TPASS_0963 - hypothetical integral membrane protein 951 54.80 0 1047280..1047987 - 235 189026187 - TPASS_0964 - ABC transporter, ATP-binding protein 952 53.17 0 1047987..1048949 - 320 189026188 - TPASS_0965 - possible membrane fusion protein 953 58.72 +1 1048974..1050608 - 544 189026189 - TPASS_0966 - hypothetical protein 954 60.23 +1 1050655..1052208 - 517 189026190 - TPASS_0967 - hypothetical protein 955 59.89 +1 1052205..1053827 - 540 189026191 - TPASS_0968 - hypothetical protein 956 57.41 +1 1053824..1055443 - 539 189026192 - TPASS_0969 - hypothetical protein 957 55.56 0 1055440..1055556 - 38 189026193 - TPASS_0970 - hypothetical protein 958 55.12 0 1055578..1056192 - 204 189026194 tpd TPASS_0971 - membrane antigen, pathogen-specific 959 59.09 +1 1056348..1057694 - 448 189026195 - TPASS_0972 - hypothetical integral membrane protein 960 57.82 +1 1057782..1059443 + 553 189026196 pheS TPASS_0973 - phenylalanyl-tRNA synthetase, subunit alpha 961 56.03 0 1059495..1059776 - 93 189026197 - TPASS_0974 - hypothetical protein 962 59.39 +1 1059828..1060652 - 274 189026198 - TPASS_0975 - hypothetical protein 963 58.62 +1 1060700..1062079 + 459 189026199 - TPASS_0976 - hypothetical protein 964 56.91 0 1062066..1062926 + 286 189026200 - TPASS_0977 - hypothetical protein 965 50.17 0 1062923..1063516 + 197 189026201 lsp TPASS_0978 - signal peptidase II 966 51.68 0 1063686..1064459 + 257 189026202 - TPASS_0979 - hypothetical protein 967 54.55 0 1064467..1065489 + 340 189026203 ntrB TPASS_0980 - histidine phosphokinase/phophatase 968 48.97 0 1065549..1066712 + 387 189026204 - TPASS_0981 - possible sensory transduction histidine kinase 969 46.89 -1 1066728..1067354 + 208 189026205 - TPASS_0982 - possible protein GlpG 970 53.14 0 1067344..1068060 + 238 189026206 - TPASS_0983 - hypothetical protein 971 48.28 -1 1068084..1070003 - 639 189026207 htpG TPASS_0984 - heat shock protein 90 972 54.28 0 1070147..1071955 + 602 189026208 aspS TPASS_0985 - aspartyl-tRNA synthetase 973 53.22 0 1072011..1072895 + 294 189026209 - TPASS_0986 - hypothetical integral membrane protein 974 54.97 0 1072941..1073111 - 56 189026210 - TPASS_0987 - hypothetical protein 975 51.97 0 1073178..1074014 + 278 189026211 - TPASS_0988 - hypothetical integral membrane protein 976 57.39 +1 1074050..1074922 - 290 189026212 - TPASS_0989 - protein P26 977 52.77 0 1074969..1078070 + 1033 189026213 - TPASS_0990 - hypothetical protein 978 54.09 0 1078134..1078292 + 52 189026214 - TPASS_0991 - rubredoxin 979 61.81 +2 1078325..1078612 + 95 189026215 - TPASS_0992 - hypothetical protein 980 58.20 +1 1078749..1079705 - 318 189026216 - TPASS_0993 - possible rare lipoprotein A 981 54.69 0 1080061..1080870 + 269 189026217 - TPASS_0994 - hypothetical protein 982 46.08 -1 1080946..1082232 + 428 189026218 - TPASS_0995 - cyclic nucleotide binding protein 983 50.40 0 1082315..1083931 - 538 189026219 - TPASS_0996 - hypothetical protein 984 51.03 0 1084088..1085884 - 598 189026220 sppA TPASS_0997 - protease IV 985 50.50 0 1085918..1087420 - 500 189026221 - TPASS_0998 - sodium/proton-dependent alanine transporter 986 52.79 0 1087492..1089891 + 799 189026222 - TPASS_0999 - possible cell division protein 987 53.27 0 1090069..1090740 + 223 189026223 - TPASS_1000 - hypothetical protein 988 51.95 0 1090880..1092061 - 393 189026224 - TPASS_1001 - hypothetical protein 989 49.33 0 1092075..1092743 - 222 189026225 - TPASS_1002 - hypothetical protein 990 52.99 0 1092938..1093975 + 345 189026226 - TPASS_1003 - hypothetical protein 991 55.94 0 1093998..1094603 - 201 189026227 recR TPASS_1004 - recombination protein RecR 992 50.44 0 1094677..1096395 - 572 189026228 dnaZX TPASS_1005 - DNA polymerase III, subunits gamma and tau 993 48.38 -1 1096454..1098367 - 637 189026229 gyrB TPASS_1006 - DNA gyrase, subunit B 994 52.18 0 1098476..1099393 - 305 189026230 thyX TPASS_1007 - thymidylate synthase-complementing protein 995 47.64 -1 1099436..1101973 - 845 189026231 nrdA TPASS_1008 - ribonucleoside-diphosphate reductase, subunit alpha 996 52.01 0 1102100..1103170 - 356 189026232 gpsA TPASS_1009 - glycerol-3-phosphate dehydrogenase 997 51.11 0 1103267..1103716 - 149 189026233 ndk TPASS_1010 - nucleoside-diphosphate kinase 998 50.25 0 1103842..1104450 - 202 189026234 pth TPASS_1011 - peptidyl-tRNA hydrolase 999 50.11 0 1104485..1105420 - 311 189026235 sigA TPASS_1012 - RNA polymerase sigma-43 factor 1000 47.94 -1 1105625..1105891 + 88 189026236 groES TPASS_1013 - chaperonin GroES 1001 56.38 0 1105902..1107836 - 644 189026237 - TPASS_1014 - hypothetical protein 1002 53.29 0 1107802..1108227 - 141 189026238 nusB TPASS_1015 - N utilization substance protein B 1003 49.45 0 1108224..1109309 - 361 189026239 tpn39b TPASS_1016 - basic membrane protein 1004 54.51 0 1109382..1111199 - 605 189026240 alaS TPASS_1017 - alanyl-tRNA synthetase 1005 53.00 0 1111371..1112885 + 504 189026241 - TPASS_1018 - hypothetical protein 1006 54.05 0 1112907..1113350 + 147 189026242 gatC TPASS_1019 - glu-tRNA amidotransferase, subunit C 1007 55.69 0 1113351..1114871 + 506 189026243 gatA TPASS_1020 - glu-tRNA amidotransferase, subunit A 1008 52.16 0 1114864..1116393 + 509 189026244 gatB TPASS_1021 - glu-tRNA amidotransferase, subunit B 1009 49.78 0 1116489..1117856 - 455 189026245 sms TPASS_1022 - DNA repair protein 1010 54.55 0 1117903..1118397 - 164 189026246 recX TPASS_1023 - protein RecX 1011 57.95 +1 1118525..1118914 - 129 189026247 rpsI TPASS_1024 - ribosomal protein S9 1012 56.64 0 1118930..1119358 - 142 189026248 rplM TPASS_1025 - ribosomal protein L13 1013 53.50 0 1119791..1121560 + 589 189026249 - TPASS_1026 - possible oligoendopeptidase F 1014 54.57 0 1121682..1122458 + 258 189026250 udp TPASS_1027 - uridine phosphorylase 1015 55.39 0 1122474..1124486 - 670 189026251 uvrD TPASS_1028 - DNA helicase II 1016 61.28 +1 1124569..1125255 - 228 189026252 - TPASS_1029 - hypothetical protein 1017 61.94 +2 1125413..1125772 - 119 189026253 - TPASS_1030 - hypothetical protein 1018 58.12 +1 1125800..1127344 + 514 189026254 tprL TPASS_1031 - protein TprL 1019 69.43 +2 1127412..1127846 - 144 189026255 - TPASS_1032 - hypothetical protein 1020 61.75 +2 1127858..1128793 - 311 189026256 - TPASS_1033 - hypothetical protein 1021 62.67 +2 1128867..1129892 + 341 189026257 - TPASS_1034 - hypothetical integral membrane protein 1022 53.61 0 1129889..1132759 - 956 189026258 valS TPASS_1035 - valyl-tRNA synthetase 1023 50.40 0 1132912..1135290 + 792 189026259 - TPASS_1036 - cation-transporting ATPase, P-type 1024 49.51 0 1135380..1136096 - 238 189026260 hlyIII TPASS_1037 - hemolysin III 1025 50.75 0 1136255..1136788 - 177 189026261 tpF1 TPASS_1038 - bacterioferrin TpF1 1026 53.40 0 1137015..1137587 + 190 189026262 apt TPASS_1039 - adenine phosphoribosyltransferase 1027 52.18 0 1137610..1138665 - 351 189026263 lysS2 TPASS_1040 - lysyl-tRNA synthetase 1028 47.48 -1 1138665..1139378 - 237 189026264 clpP2 TPASS_1041 - ATP-dependent Clp protease proteolytic component 52.88 MEAN 4.36 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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