version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 922 59.38 +1 1008605..1009345 + 246 15639913 - TP0928 - hypothetical protein 923 55.25 0 1009357..1010127 + 256 15639914 - TP0929 - hypothetical protein 924 50.64 0 1010151..1011872 + 573 15639915 - TP0930 - hypothetical protein 925 46.19 -1 1011956..1013386 - 476 15639916 - TP0931 - hypothetical protein 926 53.76 0 1013396..1013488 - 30 15639917 - TP0932 - hypothetical protein 927 51.32 0 1013498..1015120 - 540 15639918 - TP0933 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (murE) 928 49.18 0 1015256..1016479 + 407 15639919 - TP0934 - glutamate transporter, putative 929 50.37 0 1016472..1017410 - 312 15639920 - TP0935 - N-acetylphosphinothricin-tripetide-deacetylase, putative 930 52.23 0 1017604..1018677 - 357 15639921 - TP0936 - hemolysin, putative 931 53.62 0 1018849..1019484 - 211 15639922 - TP0937 - hypothetical protein 932 55.11 0 1019481..1020311 - 276 15639923 - TP0938 - hypothetical protein 933 51.48 0 1020376..1023930 - 1184 15639924 - TP0939 - pyruvate oxidoreductase 934 54.61 0 1023946..1024086 - 46 15639925 - TP0940 - hypothetical protein 935 50.29 0 1024125..1024643 - 172 15639926 - TP0941 - hypothetical protein 936 56.34 0 1024720..1025184 - 154 15639927 - TP0942 - hypothetical protein 937 51.23 0 1025190..1025636 - 148 15639928 - TP0943 - flagellar protein (fliS) 938 53.20 0 1025685..1026857 - 390 15639929 - TP0944 - hypothetical protein 939 54.34 0 1027028..1027684 - 218 15639930 - TP0945 - ribulose-phosphate 3-epimerase (cfxE) 940 57.25 +1 1027836..1028504 + 222 15639931 - TP0946 - glucose-inhibited division protein B (gidB) 941 52.47 0 1028549..1029196 - 215 15639932 - TP0947 - peptidyl-prolyl cis-trans isomerase, cyclophilin-binding (cyp) 942 51.44 0 1029193..1029888 - 231 15639933 - TP0948 - spoIIIJ-associated protein (jag) 943 51.30 0 1029904..1031901 - 665 15639934 - TP0949 - putative inner membrane protein translocase component YidC 944 49.82 0 1031772..1032056 - 94 15640031 - TP0949a - hypothetical protein 945 55.77 0 1032053..1032459 - 135 15640027 - TP0950a - RNAse P, protein component 946 59.62 +1 1032465..1032620 - 51 15639935 rpmH TP0951 - 50S ribosomal protein L34 947 49.04 0 1032740..1033777 - 345 15639936 - TP0952 - lipase, putative 948 56.09 0 1033859..1035049 - 396 15639937 - TP0953 - pheromone shutdown protein (traB) 949 53.38 0 1035136..1036572 - 478 15639938 - TP0954 - hypothetical protein 950 53.85 0 1036644..1036916 - 90 15639939 - TP0955 - hypothetical protein 951 56.07 0 1037012..1037983 + 323 15639940 - TP0956 - hypothetical protein 952 50.15 0 1038074..1039102 + 342 15639941 - TP0957 - Tp33 protein 953 52.61 0 1039134..1041032 + 632 15639942 - TP0958 - dicarboxylate transporter (dctM) 954 54.36 0 1041101..1041490 - 129 15639943 - TP0959 - hypothetical protein 955 52.96 0 1041502..1042296 - 264 15639944 flgG TP0960 - flagellar basal body rod protein FlgG 956 47.18 -1 1042372..1043187 - 271 15639945 - TP0961 - flagellar basal-body rod protein (flgG-2) 957 50.77 0 1043273..1044505 - 410 15639946 - TP0962 - hypothetical protein 958 52.36 0 1044616..1045845 - 409 15639947 - TP0963 - hypothetical protein 959 54.80 0 1045835..1046542 - 235 15639948 - TP0964 - ABC transporter, ATP-binding protein 960 53.17 0 1046542..1047504 - 320 15639949 - TP0965 - membrane fusion protein, putative 961 58.84 +1 1047529..1049163 - 544 15639950 - TP0966 - hypothetical protein 962 60.23 +1 1049210..1050763 - 517 15639951 - TP0967 - hypothetical protein 963 59.95 +1 1050760..1052382 - 540 15639952 - TP0968 - hypothetical protein 964 57.41 +1 1052379..1053998 - 539 15639953 - TP0969 - hypothetical protein 965 55.56 0 1053995..1054111 - 38 15639954 - TP0970 - hypothetical protein 966 55.12 0 1054133..1054747 - 204 15639955 - TP0971 - membrane antigen, pathogen-specific (tpd) 967 59.09 +1 1054903..1056249 - 448 15639956 - TP0972 - hypothetical protein 968 57.76 +1 1056337..1057998 + 553 15639957 pheS TP0973 - phenylalanyl-tRNA synthetase subunit alpha 969 56.03 0 1058050..1058331 - 93 15639958 - TP0974 - hypothetical protein 970 59.39 +1 1058383..1059207 - 274 15639959 - TP0975 - hypothetical protein 971 58.62 +1 1059255..1060634 + 459 15639960 - TP0976 - hypothetical protein 972 56.91 0 1060621..1061481 + 286 15639961 - TP0977 - hypothetical protein 973 50.00 0 1061478..1062071 + 197 15639962 lspA TP0978 - signal peptidase II 974 51.68 0 1062241..1063014 + 257 15639963 - TP0979 - hypothetical protein 975 54.55 0 1063022..1064044 + 340 15639964 - TP0980 - histidine phosphokinase/phophatase (ntrB) 976 48.97 0 1064104..1065267 + 387 15639965 - TP0981 - sensory transduction histidine kinase, putative 977 46.89 -1 1065283..1065909 + 208 15639966 - TP0982 - glpG protein, putative 978 53.14 0 1065899..1066615 + 238 15639967 - TP0983 - hypothetical protein 979 48.28 -1 1066639..1068558 - 639 15639968 - TP0984 - heat shock protein 90 980 54.28 0 1068702..1070510 + 602 15639969 aspS TP0985 - aspartyl-tRNA synthetase 981 53.22 0 1070566..1071450 + 294 15639970 - TP0986 - hypothetical protein 982 54.97 0 1071496..1071666 - 56 15639971 - TP0987 - hypothetical protein 983 51.97 0 1071733..1072569 + 278 15639972 - TP0988 - hypothetical protein 984 57.39 +1 1072605..1073477 - 290 15639973 - TP0989 - P26 985 52.77 0 1073524..1076625 + 1033 15639974 - TP0990 - hypothetical protein 986 54.09 0 1076689..1076847 + 52 15639975 - TP0991 - rubredoxin 987 61.81 +2 1076880..1077167 + 95 15639976 - TP0992 - hypothetical protein 988 58.20 +1 1077304..1078260 - 318 15639977 - TP0993 - rare lipoprotein A, putative 989 54.69 0 1078616..1079425 + 269 15639978 - TP0994 - hypothetical protein 990 46.15 -1 1079501..1080787 + 428 15639979 - TP0995 - cyclic nucleotide binding protein 991 50.40 0 1080870..1082486 - 538 15639980 - TP0996 - hypothetical protein 992 51.03 0 1082643..1084439 - 598 15639981 - TP0997 - protease IV (sppA) 993 50.50 0 1084473..1085975 - 500 15639982 - TP0998 - sodium/proton-dependent alanine transporter 994 52.79 0 1086047..1088446 + 799 15639983 - TP0999 - cell division protein, putative 995 53.27 0 1088624..1089295 + 223 15639984 - TP1000 - hypothetical protein 996 51.95 0 1089435..1090616 - 393 15639985 - TP1001 - hypothetical protein 997 49.33 0 1090630..1091298 - 222 15639986 - TP1002 - hypothetical protein 998 52.99 0 1091493..1092530 + 345 15639987 - TP1003 - hypothetical protein 999 55.94 0 1092553..1093158 - 201 15639988 - TP1004 - recombination protein (recR) 1000 50.44 0 1093232..1094950 - 572 15639989 - TP1005 - DNA polymerase III subunits gamma and tau 1001 48.38 -1 1095009..1096922 - 637 15639990 - TP1006 - DNA gyrase, subunit B (gyrB) 1002 52.18 0 1097031..1097948 - 305 15639991 thyX TP1007 - FAD-dependent thymidylate synthase 1003 47.64 -1 1097991..1100528 - 845 15639992 - TP1008 - ribonucleotide-diphosphate reductase subunit alpha 1004 52.01 0 1100655..1101725 - 356 15639993 gpsA TP1009 - NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1005 51.11 0 1101822..1102271 - 149 15639994 - TP1010 - nucleoside-diphosphate kinase (ndk) 1006 50.25 0 1102397..1103005 - 202 15639995 - TP1011 - peptidyl-tRNA hydrolase 1007 50.11 0 1103040..1103975 - 311 15639996 - TP1012 - RNA polymerase sigma-43 factor (sigA) 1008 47.94 -1 1104180..1104446 + 88 15639997 groES TP1013 - co-chaperonin GroES 1009 56.38 0 1104457..1106391 - 644 15639998 - TP1014 - hypothetical protein 1010 53.29 0 1106357..1106782 - 141 15639999 nusB TP1015 - transcription antitermination protein NusB 1011 49.45 0 1106779..1107864 - 361 15640000 - TP1016 - basic membrane protein (tpn39b) 1012 54.51 0 1107937..1109754 - 605 15640001 - TP1017 - alanyl-tRNA synthetase 1013 53.00 0 1109926..1111440 + 504 15640002 - TP1018 - hypothetical protein 1014 54.05 0 1111462..1111905 + 147 15640003 - TP1019 - Glu-tRNA amidotransferase, subunit C (gatC) 1015 55.69 0 1111906..1113426 + 506 15640004 - TP1020 - Glu-tRNA amidotransferase, subunit A (gatA) 1016 52.16 0 1113419..1114948 + 509 15640005 gatB TP1021 - aspartyl/glutamyl-tRNA amidotransferase subunit B 1017 49.78 0 1115044..1116411 - 455 15640006 - TP1022 - DNA repair protein RadA 1018 54.55 0 1116458..1116952 - 164 15640007 recX TP1023 - recombination regulator RecX 1019 57.95 +1 1117080..1117469 - 129 15640008 rpsI TP1024 - 30S ribosomal protein S9 1020 56.64 0 1117485..1117913 - 142 15640009 rplM TP1025 - 50S ribosomal protein L13 1021 53.50 0 1118346..1120115 + 589 15640010 - TP1026 - oligoendopeptidase F, putative 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.