version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 879 56.24 0 962505..962945 - 146 15639870 - TP0885 - deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 880 53.53 0 962942..965050 - 702 15639871 - TP0886 - polynucleotide phosphorylase/polyadenylase 881 53.33 0 965198..965467 - 89 15639872 rpsO TP0887 - 30S ribosomal protein S15 882 60.51 +1 965483..966310 - 275 15639873 - TP0888 - riboflavin kinase/FMN adenylyltransferase (ribF) 883 56.40 0 966314..967414 - 366 15639874 - TP0889 - tRNA pseudouridine 55 synthase (truB) 884 49.08 0 967392..967772 - 126 15639875 - TP0890 - ribosome-binding factor A (rbfA) 885 52.87 0 967769..970297 - 842 15639876 infB TP0891 - translation initiation factor IF-2 886 49.66 0 970473..971930 - 485 15639877 nusA TP0892 - transcription elongation factor NusA 887 58.17 +1 971980..972450 - 156 15639878 - TP0893 - hypothetical protein 888 51.22 0 972625..973647 - 340 15639879 - TP0894 - hypothetical protein 889 53.85 0 973654..974160 - 168 15639880 - TP0895 - hypothetical protein 890 49.67 0 974182..974334 - 50 15639881 - TP0896 - hypothetical protein 891 51.32 0 974316..975833 - 505 15639882 - TP0897 - TPR protein K (tprK) 892 57.98 +1 975830..979549 - 1239 15639883 - TP0898 - ATP-dependent nuclease, subunit A, putative 893 53.74 0 979546..980133 - 195 15639884 - TP0899 - hypothetical protein 894 55.81 0 980112..982505 - 797 15639885 - TP0900 - hypothetical protein 895 51.31 0 982544..983956 - 470 15639886 - TP0901 - hypothetical protein 896 55.78 0 983997..984878 - 293 15639887 - TP0902 - carboxylesterase (est) 897 57.72 +1 984880..986478 + 532 15639888 - TP0903 - UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD) 898 50.00 0 986471..986722 + 83 15639889 - TP0904 - hypothetical protein 899 59.95 +1 986685..987056 + 123 15639890 - TP0905 - ribosomal protein S16 (rpsP) 900 55.56 0 987065..987307 + 80 15639891 - TP0906 - hypothetical protein 901 57.14 0 987370..987894 + 174 15639892 - TP0907 - hypothetical protein 902 55.64 0 987891..988643 + 250 15639893 trmD TP0908 - tRNA (guanine-N(1)-)-methyltransferase 903 52.15 0 988615..988986 + 123 15639894 rplS TP0909 - 50S ribosomal protein L19 904 57.11 0 988983..989903 + 306 15639895 - TP0910 - hypothetical protein 905 48.41 -1 989925..990176 + 83 15639896 - TP0911 - hypothetical protein 906 47.54 -1 990189..991511 + 440 15639897 - TP0912 - hypothetical protein 907 48.82 0 991495..991875 + 126 15639898 - TP0913 - hypothetical protein 908 47.80 -1 992047..992433 + 128 15639899 - TP0914 - hypothetical protein 909 49.81 0 992507..993841 + 444 15639900 - TP0915 - hypothetical protein 910 55.81 0 993898..994026 + 42 15639901 - TP0916 - hypothetical protein 911 48.37 -1 994010..995359 + 449 15639902 - TP0917 - Mg2+ transport protein (mgtE) 912 61.50 +1 995374..996147 + 257 15639903 - TP0918 - hypothetical protein 913 49.06 0 996173..996490 - 105 15639904 - TP0919 - thioredoxin (trx) 914 54.57 0 996713..999142 + 809 15639905 - TP0920 - hypothetical protein 915 49.40 0 999250..1000587 + 445 15639906 - TP0921 - NADH oxidase 916 65.21 +2 1000721..1001614 - 297 15639907 - TP0922 - hypothetical protein 917 56.57 0 1001653..1002672 - 339 15639908 - TP0923 - hypothetical protein 918 55.54 0 1002996..1005332 + 778 15639909 - TP0924 - tex protein (tex) 919 53.06 0 1005699..1006139 + 146 15639910 - TP0925 - flavodoxin 920 56.27 0 1006290..1007828 - 512 15639911 - TP0926 - signal peptidase I, putative 921 52.79 0 1007920..1008510 + 196 15639912 - TP0927 - hypothetical protein 922 59.38 +1 1008605..1009345 + 246 15639913 - TP0928 - hypothetical protein 923 55.25 0 1009357..1010127 + 256 15639914 - TP0929 - hypothetical protein 924 50.64 0 1010151..1011872 + 573 15639915 - TP0930 - hypothetical protein 925 46.19 -1 1011956..1013386 - 476 15639916 - TP0931 - hypothetical protein 926 53.76 0 1013396..1013488 - 30 15639917 - TP0932 - hypothetical protein 927 51.32 0 1013498..1015120 - 540 15639918 - TP0933 - UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase (murE) 928 49.18 0 1015256..1016479 + 407 15639919 - TP0934 - glutamate transporter, putative 929 50.37 0 1016472..1017410 - 312 15639920 - TP0935 - N-acetylphosphinothricin-tripetide-deacetylase, putative 930 52.23 0 1017604..1018677 - 357 15639921 - TP0936 - hemolysin, putative 931 53.62 0 1018849..1019484 - 211 15639922 - TP0937 - hypothetical protein 932 55.11 0 1019481..1020311 - 276 15639923 - TP0938 - hypothetical protein 933 51.48 0 1020376..1023930 - 1184 15639924 - TP0939 - pyruvate oxidoreductase 934 54.61 0 1023946..1024086 - 46 15639925 - TP0940 - hypothetical protein 935 50.29 0 1024125..1024643 - 172 15639926 - TP0941 - hypothetical protein 936 56.34 0 1024720..1025184 - 154 15639927 - TP0942 - hypothetical protein 937 51.23 0 1025190..1025636 - 148 15639928 - TP0943 - flagellar protein (fliS) 938 53.20 0 1025685..1026857 - 390 15639929 - TP0944 - hypothetical protein 939 54.34 0 1027028..1027684 - 218 15639930 - TP0945 - ribulose-phosphate 3-epimerase (cfxE) 940 57.25 +1 1027836..1028504 + 222 15639931 - TP0946 - glucose-inhibited division protein B (gidB) 941 52.47 0 1028549..1029196 - 215 15639932 - TP0947 - peptidyl-prolyl cis-trans isomerase, cyclophilin-binding (cyp) 942 51.44 0 1029193..1029888 - 231 15639933 - TP0948 - spoIIIJ-associated protein (jag) 943 51.30 0 1029904..1031901 - 665 15639934 - TP0949 - putative inner membrane protein translocase component YidC 944 49.82 0 1031772..1032056 - 94 15640031 - TP0949a - hypothetical protein 945 55.77 0 1032053..1032459 - 135 15640027 - TP0950a - RNAse P, protein component 946 59.62 +1 1032465..1032620 - 51 15639935 rpmH TP0951 - 50S ribosomal protein L34 947 49.04 0 1032740..1033777 - 345 15639936 - TP0952 - lipase, putative 948 56.09 0 1033859..1035049 - 396 15639937 - TP0953 - pheromone shutdown protein (traB) 949 53.38 0 1035136..1036572 - 478 15639938 - TP0954 - hypothetical protein 950 53.85 0 1036644..1036916 - 90 15639939 - TP0955 - hypothetical protein 951 56.07 0 1037012..1037983 + 323 15639940 - TP0956 - hypothetical protein 952 50.15 0 1038074..1039102 + 342 15639941 - TP0957 - Tp33 protein 953 52.61 0 1039134..1041032 + 632 15639942 - TP0958 - dicarboxylate transporter (dctM) 954 54.36 0 1041101..1041490 - 129 15639943 - TP0959 - hypothetical protein 955 52.96 0 1041502..1042296 - 264 15639944 flgG TP0960 - flagellar basal body rod protein FlgG 956 47.18 -1 1042372..1043187 - 271 15639945 - TP0961 - flagellar basal-body rod protein (flgG-2) 957 50.77 0 1043273..1044505 - 410 15639946 - TP0962 - hypothetical protein 958 52.36 0 1044616..1045845 - 409 15639947 - TP0963 - hypothetical protein 959 54.80 0 1045835..1046542 - 235 15639948 - TP0964 - ABC transporter, ATP-binding protein 960 53.17 0 1046542..1047504 - 320 15639949 - TP0965 - membrane fusion protein, putative 961 58.84 +1 1047529..1049163 - 544 15639950 - TP0966 - hypothetical protein 962 60.23 +1 1049210..1050763 - 517 15639951 - TP0967 - hypothetical protein 963 59.95 +1 1050760..1052382 - 540 15639952 - TP0968 - hypothetical protein 964 57.41 +1 1052379..1053998 - 539 15639953 - TP0969 - hypothetical protein 965 55.56 0 1053995..1054111 - 38 15639954 - TP0970 - hypothetical protein 966 55.12 0 1054133..1054747 - 204 15639955 - TP0971 - membrane antigen, pathogen-specific (tpd) 967 59.09 +1 1054903..1056249 - 448 15639956 - TP0972 - hypothetical protein 968 57.76 +1 1056337..1057998 + 553 15639957 pheS TP0973 - phenylalanyl-tRNA synthetase subunit alpha 969 56.03 0 1058050..1058331 - 93 15639958 - TP0974 - hypothetical protein 970 59.39 +1 1058383..1059207 - 274 15639959 - TP0975 - hypothetical protein 971 58.62 +1 1059255..1060634 + 459 15639960 - TP0976 - hypothetical protein 972 56.91 0 1060621..1061481 + 286 15639961 - TP0977 - hypothetical protein 973 50.00 0 1061478..1062071 + 197 15639962 lspA TP0978 - signal peptidase II 974 51.68 0 1062241..1063014 + 257 15639963 - TP0979 - hypothetical protein 975 54.55 0 1063022..1064044 + 340 15639964 - TP0980 - histidine phosphokinase/phophatase (ntrB) 976 48.97 0 1064104..1065267 + 387 15639965 - TP0981 - sensory transduction histidine kinase, putative 977 46.89 -1 1065283..1065909 + 208 15639966 - TP0982 - glpG protein, putative 978 53.14 0 1065899..1066615 + 238 15639967 - TP0983 - hypothetical protein 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.