version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 823 49.21 0 895372..895749 + 125 15639814 - TP0828 - holo-acyl-carrier protein synthase (acpS) 824 45.76 -1 895746..896630 + 294 15639815 - TP0829 - hypothetical protein 825 50.89 0 896627..897469 + 280 15639816 truA TP0830 - tRNA pseudouridine synthase A 826 50.17 0 897479..899248 - 589 15639817 argS TP0831 - arginyl-tRNA synthetase 827 55.88 0 899271..900086 - 271 15639818 - TP0832 - hypothetical protein 828 56.02 0 900153..900875 + 240 15639819 - TP0833 - hypothetical protein 829 51.88 0 900932..902182 - 416 15639820 - TP0834 - tyrosyl-tRNA synthetase (tyrS) 830 53.37 0 902269..905073 - 934 15639821 - TP0835 - ankyrin, putative 831 53.09 0 905214..906038 - 274 15639822 - TP0836 - hypothetical protein 832 57.90 +1 906186..907964 + 592 15639823 - TP0837 - threonyl-tRNA synthetase (thrS) 833 46.55 -1 908013..909677 - 554 15639824 - TP0838 - ABC transporter, ATP-binding protein 834 50.50 0 909752..910759 - 335 15639825 - TP0839 - hypothetical protein 835 49.78 0 910864..913113 + 749 15639826 - TP0840 - hypothetical protein 836 52.81 0 913175..914632 - 485 15639827 - TP0841 - periplasmic serine protease DO (htrA-2) 837 55.08 0 914944..915711 - 255 15639828 - TP0842 - methionine aminopeptidase (map) 838 54.67 0 915835..916659 - 274 15639829 - TP0843 - heat shock protein, putative 839 54.89 0 916752..917804 + 350 15639830 - TP0844 - glyceraldehyde 3-phosphate dehydrogenase (gap) 840 61.93 +2 917859..918449 - 196 15639831 - TP0845 - P23 protein, putative 841 53.82 0 918430..918756 - 108 15639832 - TP0846 - hypothetical protein 842 50.30 0 918756..919091 - 111 15639833 - TP0847 - hypothetical protein 843 52.30 0 919085..919453 - 122 15639834 rplT TP0848 - 50S ribosomal protein L20 844 45.27 -1 919486..919686 - 66 15639835 rpmI TP0849 - 50S ribosomal protein L35 845 51.48 0 919739..920278 - 179 15639836 infC TP0850 - translation initiation factor IF-3 846 47.03 -1 920441..922615 + 724 15639837 - TP0851 - hypothetical protein 847 48.45 -1 922644..923642 - 332 15639838 - TP0852 - prolipoprotein diacylglyceryl transferase 848 46.97 -1 923793..924929 - 378 15639839 - TP0853 - ATP-binding protein (ylxH-2) 849 48.52 -1 924984..929585 - 1533 15639840 - TP0854 - hypothetical protein 850 56.26 0 929582..932965 - 1127 15639841 - TP0855 - hypothetical protein 851 58.49 +1 933121..934098 + 325 15639842 - TP0856 - hypothetical protein 852 64.49 +2 934101..934421 - 106 15639843 - TP0857 - hypothetical protein 853 57.95 +1 934406..935632 + 408 15639844 - TP0858 - hypothetical protein 854 64.52 +2 935714..936412 + 232 15639845 - TP0859 - hypothetical protein 855 59.20 +1 936477..937199 + 240 15639846 - TP0860 - hypothetical protein 856 56.87 0 937274..939181 - 635 15639847 - TP0861 - glucosamine-fructose-6-phosphate aminotransferase (glmS) 857 54.09 0 939418..940212 - 264 15639848 - TP0862 - peptidyl-prolyl cis-trans isomerase, FKBP-type, 22 kDa (fklB) 858 57.94 +1 940347..941630 + 427 15639849 - TP0863 - nitrogen fixation protein (nifS-2) 859 55.58 0 941689..943329 - 546 15639850 - TP0864 - hypothetical protein 860 54.51 0 943363..944802 - 479 15639851 - TP0865 - hypothetical protein 861 56.99 0 946794..946979 - 61 15639852 - TP0867 - hypothetical protein 862 54.47 0 947148..948008 + 286 15639853 - TP0868 - flagellar filament 34.5 kDa core protein (flaB1) 863 55.27 0 948023..948259 + 78 15639854 - TP0869 - hypothetical protein 864 53.50 0 948287..949144 + 285 15639855 - TP0870 - flagellar filament 31 kDa core protein (flaB3) 865 46.30 -1 949205..949366 - 53 15639856 - TP0871 - hypothetical protein 866 53.94 0 949442..951610 + 722 15639857 fliD TP0872 - flagellar hook-associated protein FliD 867 46.60 -1 951622..952224 + 200 15639858 - TP0873 - hypothetical protein 868 46.38 -1 952221..952496 + 91 15639859 - TP0874 - hypothetical protein 869 56.86 0 952536..952943 + 135 15639860 - TP0875 - hypothetical protein 870 52.40 0 952990..953655 + 221 15639861 - TP0876 - hypothetical protein 871 43.35 -2 953660..954757 + 365 15639862 - TP0877 - hypothetical protein 872 44.06 -2 954770..955720 - 316 15639863 - TP0878 - hypothetical protein 873 43.45 -2 955726..957207 - 493 15639864 - TP0879 - hypothetical protein 874 42.15 -2 957204..957929 - 241 15639865 - TP0880 - membrane spanning protein, putative 875 46.84 -1 957919..958725 - 268 15639866 - TP0881 - ABC transporter, ATP-binding protein (natA) 876 42.91 -2 958804..960306 - 500 15639867 - TP0882 - hypothetical protein 877 37.89 -2 960272..961369 - 365 15639868 - TP0883 - hypothetical protein 878 45.09 -1 961387..962475 - 362 15639869 - TP0884 - hypothetical protein 879 56.24 0 962505..962945 - 146 15639870 - TP0885 - deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 880 53.53 0 962942..965050 - 702 15639871 - TP0886 - polynucleotide phosphorylase/polyadenylase 881 53.33 0 965198..965467 - 89 15639872 rpsO TP0887 - 30S ribosomal protein S15 882 60.51 +1 965483..966310 - 275 15639873 - TP0888 - riboflavin kinase/FMN adenylyltransferase (ribF) 883 56.40 0 966314..967414 - 366 15639874 - TP0889 - tRNA pseudouridine 55 synthase (truB) 884 49.08 0 967392..967772 - 126 15639875 - TP0890 - ribosome-binding factor A (rbfA) 885 52.87 0 967769..970297 - 842 15639876 infB TP0891 - translation initiation factor IF-2 886 49.66 0 970473..971930 - 485 15639877 nusA TP0892 - transcription elongation factor NusA 887 58.17 +1 971980..972450 - 156 15639878 - TP0893 - hypothetical protein 888 51.22 0 972625..973647 - 340 15639879 - TP0894 - hypothetical protein 889 53.85 0 973654..974160 - 168 15639880 - TP0895 - hypothetical protein 890 49.67 0 974182..974334 - 50 15639881 - TP0896 - hypothetical protein 891 51.32 0 974316..975833 - 505 15639882 - TP0897 - TPR protein K (tprK) 892 57.98 +1 975830..979549 - 1239 15639883 - TP0898 - ATP-dependent nuclease, subunit A, putative 893 53.74 0 979546..980133 - 195 15639884 - TP0899 - hypothetical protein 894 55.81 0 980112..982505 - 797 15639885 - TP0900 - hypothetical protein 895 51.31 0 982544..983956 - 470 15639886 - TP0901 - hypothetical protein 896 55.78 0 983997..984878 - 293 15639887 - TP0902 - carboxylesterase (est) 897 57.72 +1 984880..986478 + 532 15639888 - TP0903 - UDP-N-acetylmuramoylalanine--D-glutamate ligase (murD) 898 50.00 0 986471..986722 + 83 15639889 - TP0904 - hypothetical protein 899 59.95 +1 986685..987056 + 123 15639890 - TP0905 - ribosomal protein S16 (rpsP) 900 55.56 0 987065..987307 + 80 15639891 - TP0906 - hypothetical protein 901 57.14 0 987370..987894 + 174 15639892 - TP0907 - hypothetical protein 902 55.64 0 987891..988643 + 250 15639893 trmD TP0908 - tRNA (guanine-N(1)-)-methyltransferase 903 52.15 0 988615..988986 + 123 15639894 rplS TP0909 - 50S ribosomal protein L19 904 57.11 0 988983..989903 + 306 15639895 - TP0910 - hypothetical protein 905 48.41 -1 989925..990176 + 83 15639896 - TP0911 - hypothetical protein 906 47.54 -1 990189..991511 + 440 15639897 - TP0912 - hypothetical protein 907 48.82 0 991495..991875 + 126 15639898 - TP0913 - hypothetical protein 908 47.80 -1 992047..992433 + 128 15639899 - TP0914 - hypothetical protein 909 49.81 0 992507..993841 + 444 15639900 - TP0915 - hypothetical protein 910 55.81 0 993898..994026 + 42 15639901 - TP0916 - hypothetical protein 911 48.37 -1 994010..995359 + 449 15639902 - TP0917 - Mg2+ transport protein (mgtE) 912 61.50 +1 995374..996147 + 257 15639903 - TP0918 - hypothetical protein 913 49.06 0 996173..996490 - 105 15639904 - TP0919 - thioredoxin (trx) 914 54.57 0 996713..999142 + 809 15639905 - TP0920 - hypothetical protein 915 49.40 0 999250..1000587 + 445 15639906 - TP0921 - NADH oxidase 916 65.21 +2 1000721..1001614 - 297 15639907 - TP0922 - hypothetical protein 917 56.57 0 1001653..1002672 - 339 15639908 - TP0923 - hypothetical protein 918 55.54 0 1002996..1005332 + 778 15639909 - TP0924 - tex protein (tex) 919 53.06 0 1005699..1006139 + 146 15639910 - TP0925 - flavodoxin 920 56.27 0 1006290..1007828 - 512 15639911 - TP0926 - signal peptidase I, putative 921 52.79 0 1007920..1008510 + 196 15639912 - TP0927 - hypothetical protein 922 59.38 +1 1008605..1009345 + 246 15639913 - TP0928 - hypothetical protein 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.