version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 732 51.72 0 801426..802268 - 280 15639723 - TP0736 - ferredoxin--NADP(+) reductase subunit alpha 733 52.17 0 802502..803812 + 436 15639724 - TP0737 - sugar ABC transporter, periplasmic binding protein (msmE) 734 58.93 +1 803858..804193 - 111 15639725 - TP0738 - hypothetical protein 735 45.86 -1 804190..805386 - 398 15639726 - TP0739 - hypothetical protein 736 55.38 0 805460..806026 - 188 15639727 - TP0740 - hypothetical protein 737 55.28 0 806154..806768 - 204 15639728 - TP0741 - hypothetical protein 738 57.74 +1 806765..807895 - 376 15639729 obgE TP0742 - GTPase ObgE 739 54.17 0 808013..808276 - 87 15639730 rpmA TP0743 - 50S ribosomal protein L27 740 56.88 0 808307..808633 - 108 15639731 - TP0744 - hypothetical protein 741 51.89 0 808646..808963 - 105 15639732 rplU TP0745 - 50S ribosomal protein L21 742 51.03 0 809070..811775 - 901 15639733 - TP0746 - pyruvate phosphate dikinase 743 50.14 0 811785..812819 - 344 15639734 - TP0747 - hypothetical protein 744 48.31 -1 812908..814944 - 678 15639735 - TP0748 - cytoplasmic filament protein A (cfpA) 745 37.84 -2 814922..815143 - 73 15639736 - TP0749 - hypothetical protein 746 52.23 0 815113..815784 + 223 15639737 - TP0750 - hypothetical protein 747 56.58 0 815821..816534 + 237 15639738 - TP0751 - hypothetical protein 748 54.59 0 816672..817814 - 380 15639739 - TP0752 - hypothetical protein 749 47.72 -1 817895..818179 - 94 15639740 - TP0753 - hypothetical protein 750 48.80 0 818176..819546 - 456 15639741 - TP0754 - hypothetical protein 751 48.43 -1 819588..820130 - 180 15639742 - TP0755 - PTS system, nitrogen regulatory IIA component (ptsN-2) 752 55.31 0 820330..821289 - 319 15639743 - TP0756 - methionyl-tRNA formyltransferase (fmt) 753 55.42 0 821293..821781 - 162 15639744 - TP0757 - polypeptide deformylase (def) 754 48.57 -1 821822..822031 - 69 15639745 rpsU TP0758 - 30S ribosomal protein S21 755 54.17 0 822150..822269 + 39 15639746 - TP0759 - hypothetical protein 756 54.26 0 822226..824184 + 652 15639747 - TP0760 - penicillin-binding protein (pbp-3) 757 53.81 0 824165..825043 + 292 15639748 - TP0761 - hypothetical protein 758 57.70 +1 825072..826253 + 393 15639749 - TP0762 - hypothetical protein 759 53.93 0 826315..827256 - 313 15639750 - TP0763 - hypothetical protein 760 53.74 0 827215..828390 + 391 15639751 - TP0764 - hypothetical protein 761 52.95 0 828372..830201 - 609 15639752 - TP0765 - cell division protein (ftsH) 762 57.60 +1 830604..831485 + 293 15639753 - TP0766 - hypothetical protein 763 52.97 0 831696..833783 + 695 15639754 - TP0767 - elongation factor G 764 56.07 0 833922..834959 + 345 15639755 - TP0768 - membrane protein (tmpA) 765 55.83 0 834956..835933 + 325 15639756 - TP0769 - outer membrane protein (tmpB) 766 53.49 0 835978..837927 + 649 15639757 - TP0770 - ATP-dependent RNA helicase 767 46.30 -1 837948..839729 - 593 15639758 - TP0771 - hypothetical protein 768 50.67 0 839733..840557 + 274 15639759 - TP0772 - hypothetical protein 769 55.72 0 840597..841793 - 398 15639760 - TP0773 - periplasmic serine protease DO (htrA-1) 770 50.67 0 842138..842812 + 224 15639761 - TP0774 - Mg2+ transport protein (mgtC) 771 55.19 0 842892..843527 + 211 15639762 - TP0775 - endonuclease III (nth) 772 57.27 +1 843604..844380 - 258 15639763 - TP0776 - hypothetical protein 773 49.78 0 844433..844657 - 74 15639764 - TP0777 - hypothetical protein 774 53.95 0 844726..845637 - 303 15639765 - TP0778 - mazG protein (mazG) 775 50.39 0 845634..846278 - 214 15639766 - TP0779 - dedA protein (dedA) 776 55.39 0 846325..848364 - 679 15639767 nadE TP0780 - NAD synthetase 777 54.33 0 848401..848862 - 153 15639768 - TP0781 - hypothetical protein 778 51.58 0 848908..849351 - 147 15639769 - TP0782 - hypothetical protein 779 51.76 0 849380..850513 - 377 15639770 - TP0783 - hypothetical protein 780 54.83 0 850679..851278 + 199 15639771 - TP0784 - hypothetical protein 781 49.78 0 851275..851961 + 228 15639772 - TP0785 - hypothetical protein 782 52.24 0 852093..852806 + 237 15639773 - TP0786 - ABC transporter, ATP-binding protein, putative 783 51.43 0 852853..853272 - 139 15639774 - TP0787 - hypothetical protein 784 58.14 +1 853354..854244 + 296 15639775 - TP0788 - hypothetical protein 785 50.97 0 854257..855033 - 258 15639776 - TP0789 - hypothetical protein 786 50.28 0 855052..857718 - 888 15639777 - TP0790 - antibiotic transport protein, putative 787 54.07 0 857861..858106 - 81 15639778 - TP0791 - hypothetical protein 788 52.96 0 858092..858952 + 286 15639779 - TP0792 - flagellar filament 33 kDa core protein (flaB2) 789 49.38 0 859031..860650 + 539 15639780 - TP0793 - hypothetical protein 790 53.23 0 860687..861877 - 396 15639781 - TP0794 - S-adenosylmethionine synthetase 791 55.35 0 861931..862089 + 52 15639782 - TP0795 - hypothetical protein 792 56.11 0 862078..863166 - 362 15639783 - TP0796 - hypothetical protein 793 56.69 0 863226..864017 - 263 15639784 - TP0797 - 1-pyrroline-5-carboxylate reductase (proC) 794 53.86 0 864068..866503 - 811 15639785 metG TP0798 - methionyl-tRNA synthetase 795 46.41 -1 866536..866688 + 50 15639786 - TP0799 - hypothetical protein 796 57.84 +1 866831..868303 + 490 15639787 - TP0800 - serine-type D-Ala-D-Ala carboxypeptidase (dacC) 797 48.85 0 868364..870793 - 809 15639788 - TP0801 - ATP-dependent Clp protease subunit A (clpA) 798 55.15 0 870839..871168 + 109 15639789 - TP0802 - hypothetical protein 799 49.38 0 871182..872390 + 402 15639790 - TP0803 - hypothetical protein 800 47.85 -1 872468..873631 + 387 15639791 - TP0804 - sugar ABC transporter, ATP-binding protein (ugpC) 801 55.53 0 873482..875761 - 759 15639792 - TP0805 - exoribonuclease II (rnb) 802 55.64 0 875758..877254 - 498 15639793 - TP0806 - femA protein, putative 803 55.03 0 877383..877571 + 62 15639794 rpmF TP0807 - 50S ribosomal protein L32 804 48.10 -1 877632..877868 + 78 15639795 - TP0808 - acyl carrier protein (acpP) 805 56.86 0 877865..878629 + 254 15639796 - TP0809 - ribonuclease III (rnc) 806 55.04 0 878660..879571 + 303 15639797 - TP0810 - DNA adenine methyltransferase (dam) 807 44.44 -1 879642..879767 - 41 15639798 - TP0811 - hypothetical protein 808 55.01 0 881178..882464 - 428 15639799 - TP0813 - hypothetical protein 809 53.14 0 882687..883610 + 307 15639800 - TP0814 - thioredoxin reductase (trxB) 810 52.13 0 883732..884715 + 327 15639801 - TP0815 - hypothetical protein 811 52.10 0 884787..885452 - 221 15639802 - TP0816 - hypothetical protein 812 52.35 0 885590..886888 - 432 15639803 - TP0817 - enolase (eno) 813 52.29 0 886885..887037 - 50 15639804 - TP0818 - hypothetical protein 814 51.23 0 887064..887996 - 310 15639805 - TP0819 - ribonuclease Z 815 55.77 0 888024..888794 - 256 15639806 - TP0820 - hypothetical protein 816 53.90 0 888890..889696 - 268 15639807 - TP0821 - lipoprotein (tpn32) 817 55.30 0 889777..890682 - 301 15639808 - TP0822 - hypothetical protein 818 55.30 0 890770..891156 - 128 15639809 - TP0823 - desulfoferrodoxin (rbo) 819 56.05 0 891553..893445 + 630 15639810 - TP0824 - 1-deoxy-D-xylulose-5-phosphate synthase 820 62.90 +2 893442..893627 + 61 15639811 - TP0825 - hypothetical protein 821 51.09 0 893614..894435 + 273 15639812 - TP0826 - hypothetical protein 822 53.44 0 894098..895375 + 425 15639813 - TP0827 - hypothetical protein 823 49.21 0 895372..895749 + 125 15639814 - TP0828 - holo-acyl-carrier protein synthase (acpS) 824 45.76 -1 895746..896630 + 294 15639815 - TP0829 - hypothetical protein 825 50.89 0 896627..897469 + 280 15639816 truA TP0830 - tRNA pseudouridine synthase A 826 50.17 0 897479..899248 - 589 15639817 argS TP0831 - arginyl-tRNA synthetase 827 55.88 0 899271..900086 - 271 15639818 - TP0832 - hypothetical protein 828 56.02 0 900153..900875 + 240 15639819 - TP0833 - hypothetical protein 829 51.88 0 900932..902182 - 416 15639820 - TP0834 - tyrosyl-tRNA synthetase (tyrS) 830 53.37 0 902269..905073 - 934 15639821 - TP0835 - ankyrin, putative 831 53.09 0 905214..906038 - 274 15639822 - TP0836 - hypothetical protein 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.