version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 562 51.69 0 611049..613085 + 678 15639553 - TP0564 - hypothetical protein 563 50.29 0 612967..614187 - 406 15639554 - TP0565 - hypothetical protein 564 45.50 -1 614198..615685 - 495 15639555 - TP0566 - alginate O-acetylation protein (algI) 565 50.24 0 615717..616337 - 206 15639556 - TP0567 - hypothetical protein 566 54.98 0 616416..617048 - 210 15639557 - TP0568 - 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase (eda) 567 56.47 0 617170..619494 - 774 15639558 - TP0569 - aminopeptidase P 568 56.03 0 619519..620364 - 281 15639559 - TP0570 - hypothetical protein 569 55.56 0 620391..621056 - 221 15639560 - TP0571 - Tp70 protein 570 56.23 0 621074..622156 - 360 15639561 - TP0572 - hypothetical protein 571 44.09 -2 622147..622239 + 30 15639562 - TP0573 - hypothetical protein 572 54.02 0 622266..623570 - 434 15639563 - TP0574 - carboxypeptidase, 47 kDa 573 56.01 0 625802..626908 + 368 15639564 - TP0576 - peptide chain release factor 2 (prfB) 574 56.04 0 626800..628644 + 614 15639565 - TP0577 - hypothetical protein 575 54.39 0 628651..629538 + 295 15639566 - TP0578 - cell division protein (ftsY) 576 52.77 0 629535..630311 + 258 15639567 - TP0579 - hypothetical protein 577 46.90 -1 630304..631593 + 429 15639568 - TP0580 - hypothetical protein 578 46.70 -1 631586..632266 + 226 15639569 - TP0581 - ABC transporter, ATP-binding protein 579 50.81 0 632263..633750 + 495 15639570 - TP0582 - hypothetical protein 580 53.17 0 633734..633859 - 41 15639571 - TP0583 - hypothetical protein 581 48.72 0 633846..635255 + 469 15639572 - TP0584 - hypothetical protein 582 54.50 0 635248..636891 + 547 15639573 - TP0585 - oligopeptide ABC transporter, periplasmic binding protein (oppA) 583 53.55 0 636980..639616 + 878 15639574 leuS TP0586 - leucyl-tRNA synthetase 584 54.55 0 639596..639826 - 76 15639575 - TP0587 - hypothetical protein 585 48.24 -1 639853..640617 - 254 15639576 - TP0588 - hypothetical protein 586 49.81 0 640705..640971 - 88 15639577 - TP0589 - phosphocarrier protein HPr (ptsH) 587 49.57 0 640943..641059 - 38 15639578 - TP0590 - ribosomal protein L36 (rpmJ-2) 588 48.08 -1 641016..642005 - 329 161579585 - TP0591 - HPr kinase/phosphorylase 589 52.10 0 642738..644240 + 500 15639580 - TP0592 - hypothetical protein 590 55.11 0 644177..646210 + 677 15639581 - TP0593 - hypothetical protein 591 52.05 0 646297..646905 - 202 15639582 - TP0594 - hypothetical protein 592 52.04 0 646933..647568 - 211 15639583 - TP0595 - adenylate kinase (adk) 593 56.33 0 647592..648704 - 370 15639584 - TP0596 - polynucleotide adenylyltransferase (pcnB) 594 48.75 0 648812..649090 - 92 15639585 - TP0597 - hypothetical protein 595 51.05 0 649054..650871 - 605 15639586 - TP0598 - hypothetical protein 596 48.10 -1 650908..651564 - 218 15639587 - TP0599 - hypothetical protein 597 48.26 -1 651571..652923 - 450 15639588 - TP0600 - zinc protease, putative 598 52.52 0 652920..654071 - 383 15639589 - TP0601 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 599 48.50 -1 654047..654910 - 287 15639590 - TP0602 - phosphatidate cytidylyltransferase (cdsA) 600 52.98 0 654907..655593 - 228 15639591 - TP0603 - hypothetical protein 601 52.90 0 655599..656150 - 183 15639592 - TP0604 - ribosome recycling factor 602 55.90 0 656254..657126 - 290 15639593 tsf TP0605 - elongation factor Ts 603 50.00 0 657217..658092 - 291 15639594 rpsB TP0606 - 30S ribosomal protein S2 604 54.42 0 658061..658207 - 48 15639595 - TP0607 - hypothetical protein 605 58.02 +1 658457..659347 - 296 15639596 - TP0608 - hypothetical protein 606 59.29 +1 659665..661236 + 523 15639597 asnC TP0609 - asparaginyl-tRNA synthetase 607 54.80 0 661246..663327 + 693 15639598 - TP0610 - TPR protein H (tprH) 608 54.74 0 663469..664248 + 259 15639599 - TP0611 - ABC transporter, ATP-binding protein 609 52.08 0 664329..665768 + 479 15639600 - TP0612 - hypothetical protein 610 52.83 0 665795..666943 + 382 15639601 - TP0613 - hypothetical protein 611 54.40 0 666940..668154 + 404 15639602 - TP0614 - nitrogen fixation protein (nifS-1) 612 54.05 0 668205..668648 + 147 15639603 - TP0615 - nitrogen fixation protein (nifU) 613 55.16 0 668669..669433 + 254 15639604 - TP0616 - ribose 5-phosphate isomerase (rpiA) 614 59.14 +1 669460..669738 - 92 15639605 - TP0617 - hypothetical protein 615 60.83 +1 669834..670193 - 119 15639606 - TP0618 - hypothetical protein 616 60.76 +1 670249..671061 - 270 15639607 - TP0619 - hypothetical protein 617 57.43 +1 671058..672887 - 609 15639608 - TP0620 - TPR protein I (tprI) 618 56.43 0 672945..675221 - 758 15639609 - TP0621 - TPR protein J (tprJ) 619 55.39 0 675281..677062 - 593 15639610 - TP0622 - hypothetical protein 620 60.13 +1 676479..678818 + 779 15639611 - TP0623 - membrane-bound lytic murein transglycosylase D (dniR) 621 55.00 0 678822..680252 + 476 15639612 - TP0624 - hypothetical protein 622 49.27 0 680252..681004 + 250 15639613 - TP0625 - hypothetical protein 623 49.15 0 681001..682176 + 391 15639614 - TP0626 - exonuclease, putative 624 46.56 -1 682173..685316 + 1047 15639615 - TP0627 - exonuclease (sbcC) 625 51.55 0 685313..686794 + 493 15639616 - TP0628 - nicotinate phosphoribosyltransferase 626 56.36 0 686965..687789 + 274 15639617 - TP0629 - hypothetical protein 627 49.78 0 687959..688870 + 303 15639618 - TP0630 - chemotaxis protein methyltransferase (cheR) 628 53.38 0 688917..690128 + 403 15639619 - TP0631 - protein-glutamate methylesterase (cheB) 629 56.61 0 690233..691246 + 337 15639620 - TP0632 - tryptophanyl-tRNA synthetase 630 53.20 0 691387..692262 + 291 15639621 - TP0633 - bifunctional methionine sulfoxide reductase B/A protein 631 51.17 0 692381..694852 + 823 15639622 - TP0634 - DNA ligase (lig) 632 51.10 0 694887..695657 - 256 15639623 - TP0636 - hypothetical protein 633 52.68 0 695695..696645 - 316 15639624 miaA TP0637 - tRNA delta(2)-isopentenylpyrophosphate transferase 634 55.40 0 696869..697303 - 144 15639625 - TP0638 - hypothetical protein 635 55.47 0 697723..699687 + 654 15639626 - TP0639 - methyl-accepting chemotaxis protein (mcp2-2) 636 51.49 0 699711..701555 + 614 15639627 - TP0640 - methyl-accepting chemotaxis protein (mcp2-3) 637 49.89 0 701573..702901 - 442 15639628 hisS TP0641 - histidyl-tRNA synthetase 638 49.69 0 703042..704802 + 586 15639629 - TP0642 - phosphomannomutase (manB) 639 46.60 -1 704799..705446 + 215 15639630 - TP0643 - DNA polymerase III, subunit epsilon (dnaQ) 640 47.45 -1 705443..707029 - 528 15639631 lysK TP0644 - lysyl-tRNA synthetase 641 55.37 0 707060..707236 - 58 15639632 - TP0645 - hypothetical protein 642 49.96 0 707295..708617 - 440 15639633 - TP0646 - hypothetical protein 643 49.41 0 708529..709809 - 426 15639634 - TP0647 - seryl-tRNA synthetase 644 50.61 0 709859..711907 - 682 15639635 - TP0648 - hypothetical protein 645 47.37 -1 711852..712649 - 265 15639636 - TP0649 - hemolysin (tlyC) 646 49.69 0 712637..713119 - 160 15639637 - TP0650 - putative metalloprotease 647 52.20 0 713125..715536 - 803 15639638 - TP0651 - hypothetical protein 648 54.04 0 715712..716851 + 379 15639639 - TP0652 - spermidine/putrescine ABC transporter, ATP-binding protein (potA) 649 55.11 0 716848..717747 + 299 15639640 - TP0653 - spermidine/putrescine ABC transporter, permease protein (potB) 650 50.06 0 717740..718558 + 272 15639641 - TP0654 - spermidine/putrescine ABC transporter, permease protein (potC) 651 47.56 -1 718594..719640 + 348 15639642 - TP0655 - spermidine/putrescine ABC transporter, periplasmic binding protein (potD) 652 55.88 0 719609..719710 + 33 15639643 - TP0656 - hypothetical protein 653 49.10 0 719695..719916 - 73 15639644 - TP0657 - carbon storage regulator (csrA) 654 48.57 -1 719910..720362 - 150 15639645 - TP0658 - flagellar assembly protein FliW 655 51.96 0 720381..721631 - 416 15639646 - TP0659 - flagellar hook-associated protein FlgL 656 51.17 0 721665..723542 - 625 15639647 flgK TP0660 - flagellar hook-associated protein FlgK 657 55.36 0 723648..724160 - 170 15639648 - TP0661 - hypothetical protein 658 53.35 0 724283..725281 - 332 15639649 - TP0662 - fructose-bisphosphate aldolase 659 54.73 0 725548..726276 + 242 15639650 - TP0663 - outer membrane protein, putative 660 54.55 0 726273..726998 + 241 15639651 - TP0664 - flagellar filament outer layer protein (flaA-2) 661 57.54 +1 727016..727771 - 251 15639652 - TP0665 - hypothetical protein 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.