version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 535 56.27 0 579055..579804 - 249 15639526 - TP0537 - triosephosphate isomerase (tpi) 536 53.97 0 579955..581214 - 419 15639527 pgk TP0538 - phosphoglycerate kinase 537 51.35 0 581186..581407 + 73 15639528 - TP0539 - hypothetical protein 538 50.27 0 581688..582059 + 123 15639529 - TP0540 - anti-sigma F factor antagonist (SpoIIAA-2) 539 55.10 0 582189..583148 + 319 15639530 era TP0541 - GTP-binding protein Era 540 53.08 0 583145..584866 - 573 15639531 - TP0542 - diphosphate--fructose-6-phosphate 1-phosphotransferase 541 52.05 0 584926..585609 - 227 15639532 - TP0543 - Holliday junction DNA helicase (ruvA) 542 50.94 0 585651..587519 - 622 15639533 - TP0544 - hypothetical protein 543 51.17 0 587544..588608 - 354 15639534 - TP0545 - methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-1) 544 55.17 0 588693..590693 - 666 15639535 - TP0546 - periplasmic serine protease, putative 545 64.19 +2 590405..591535 - 376 15639536 - TP0547 - penicillin tolerance protein (lytB) 546 57.62 +1 591679..592983 + 434 15639537 - TP0548 - hypothetical protein 547 55.26 0 593081..595525 + 814 15639538 - TP0549 - ATPase (clpC) 548 56.18 0 595566..597053 - 495 15639539 trmE TP0550 - tRNA modification GTPase TrmE 549 57.12 0 597057..598145 - 362 15639540 - TP0551 - phosphatase 550 57.12 0 598158..598691 - 177 15639541 - TP0552 - hypothetical protein 551 47.69 -1 598935..600146 + 403 15639542 - TP0553 - hypothetical protein 552 54.56 0 600181..600849 + 222 15639543 - TP0554 - phosphoglycolate phosphatase (gph-2) 553 54.49 0 600913..602103 - 396 15639544 - TP0555 - glutamate/ aspartate transporter, putative 554 53.98 0 602326..603318 - 330 15639545 - TP0556 - asparagine synthetase AsnA 555 51.82 0 603423..604136 + 237 15639546 - TP0557 - hypothetical protein 556 56.44 0 604166..605074 + 302 15639547 - TP0558 - hypothetical protein 557 55.39 0 605136..606341 + 401 15639548 - TP0559 - hypothetical protein 558 54.78 0 606394..608379 - 661 15639549 - TP0560 - transketolase A (tktA) 559 59.39 +1 608490..609341 - 283 15639550 - TP0561 - hypothetical protein 560 57.08 0 609512..610648 + 378 15639551 - TP0562 - spore coat polysaccharide biosynthesis protein (spsE) 561 55.80 0 610639..611052 + 137 15639552 - TP0563 - hypothetical protein 562 51.69 0 611049..613085 + 678 15639553 - TP0564 - hypothetical protein 563 50.29 0 612967..614187 - 406 15639554 - TP0565 - hypothetical protein 564 45.50 -1 614198..615685 - 495 15639555 - TP0566 - alginate O-acetylation protein (algI) 565 50.24 0 615717..616337 - 206 15639556 - TP0567 - hypothetical protein 566 54.98 0 616416..617048 - 210 15639557 - TP0568 - 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase (eda) 567 56.47 0 617170..619494 - 774 15639558 - TP0569 - aminopeptidase P 568 56.03 0 619519..620364 - 281 15639559 - TP0570 - hypothetical protein 569 55.56 0 620391..621056 - 221 15639560 - TP0571 - Tp70 protein 570 56.23 0 621074..622156 - 360 15639561 - TP0572 - hypothetical protein 571 44.09 -2 622147..622239 + 30 15639562 - TP0573 - hypothetical protein 572 54.02 0 622266..623570 - 434 15639563 - TP0574 - carboxypeptidase, 47 kDa 573 56.01 0 625802..626908 + 368 15639564 - TP0576 - peptide chain release factor 2 (prfB) 574 56.04 0 626800..628644 + 614 15639565 - TP0577 - hypothetical protein 575 54.39 0 628651..629538 + 295 15639566 - TP0578 - cell division protein (ftsY) 576 52.77 0 629535..630311 + 258 15639567 - TP0579 - hypothetical protein 577 46.90 -1 630304..631593 + 429 15639568 - TP0580 - hypothetical protein 578 46.70 -1 631586..632266 + 226 15639569 - TP0581 - ABC transporter, ATP-binding protein 579 50.81 0 632263..633750 + 495 15639570 - TP0582 - hypothetical protein 580 53.17 0 633734..633859 - 41 15639571 - TP0583 - hypothetical protein 581 48.72 0 633846..635255 + 469 15639572 - TP0584 - hypothetical protein 582 54.50 0 635248..636891 + 547 15639573 - TP0585 - oligopeptide ABC transporter, periplasmic binding protein (oppA) 583 53.55 0 636980..639616 + 878 15639574 leuS TP0586 - leucyl-tRNA synthetase 584 54.55 0 639596..639826 - 76 15639575 - TP0587 - hypothetical protein 585 48.24 -1 639853..640617 - 254 15639576 - TP0588 - hypothetical protein 586 49.81 0 640705..640971 - 88 15639577 - TP0589 - phosphocarrier protein HPr (ptsH) 587 49.57 0 640943..641059 - 38 15639578 - TP0590 - ribosomal protein L36 (rpmJ-2) 588 48.08 -1 641016..642005 - 329 161579585 - TP0591 - HPr kinase/phosphorylase 589 52.10 0 642738..644240 + 500 15639580 - TP0592 - hypothetical protein 590 55.11 0 644177..646210 + 677 15639581 - TP0593 - hypothetical protein 591 52.05 0 646297..646905 - 202 15639582 - TP0594 - hypothetical protein 592 52.04 0 646933..647568 - 211 15639583 - TP0595 - adenylate kinase (adk) 593 56.33 0 647592..648704 - 370 15639584 - TP0596 - polynucleotide adenylyltransferase (pcnB) 594 48.75 0 648812..649090 - 92 15639585 - TP0597 - hypothetical protein 595 51.05 0 649054..650871 - 605 15639586 - TP0598 - hypothetical protein 596 48.10 -1 650908..651564 - 218 15639587 - TP0599 - hypothetical protein 597 48.26 -1 651571..652923 - 450 15639588 - TP0600 - zinc protease, putative 598 52.52 0 652920..654071 - 383 15639589 - TP0601 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 599 48.50 -1 654047..654910 - 287 15639590 - TP0602 - phosphatidate cytidylyltransferase (cdsA) 600 52.98 0 654907..655593 - 228 15639591 - TP0603 - hypothetical protein 601 52.90 0 655599..656150 - 183 15639592 - TP0604 - ribosome recycling factor 602 55.90 0 656254..657126 - 290 15639593 tsf TP0605 - elongation factor Ts 603 50.00 0 657217..658092 - 291 15639594 rpsB TP0606 - 30S ribosomal protein S2 604 54.42 0 658061..658207 - 48 15639595 - TP0607 - hypothetical protein 605 58.02 +1 658457..659347 - 296 15639596 - TP0608 - hypothetical protein 606 59.29 +1 659665..661236 + 523 15639597 asnC TP0609 - asparaginyl-tRNA synthetase 607 54.80 0 661246..663327 + 693 15639598 - TP0610 - TPR protein H (tprH) 608 54.74 0 663469..664248 + 259 15639599 - TP0611 - ABC transporter, ATP-binding protein 609 52.08 0 664329..665768 + 479 15639600 - TP0612 - hypothetical protein 610 52.83 0 665795..666943 + 382 15639601 - TP0613 - hypothetical protein 611 54.40 0 666940..668154 + 404 15639602 - TP0614 - nitrogen fixation protein (nifS-1) 612 54.05 0 668205..668648 + 147 15639603 - TP0615 - nitrogen fixation protein (nifU) 613 55.16 0 668669..669433 + 254 15639604 - TP0616 - ribose 5-phosphate isomerase (rpiA) 614 59.14 +1 669460..669738 - 92 15639605 - TP0617 - hypothetical protein 615 60.83 +1 669834..670193 - 119 15639606 - TP0618 - hypothetical protein 616 60.76 +1 670249..671061 - 270 15639607 - TP0619 - hypothetical protein 617 57.43 +1 671058..672887 - 609 15639608 - TP0620 - TPR protein I (tprI) 618 56.43 0 672945..675221 - 758 15639609 - TP0621 - TPR protein J (tprJ) 619 55.39 0 675281..677062 - 593 15639610 - TP0622 - hypothetical protein 620 60.13 +1 676479..678818 + 779 15639611 - TP0623 - membrane-bound lytic murein transglycosylase D (dniR) 621 55.00 0 678822..680252 + 476 15639612 - TP0624 - hypothetical protein 622 49.27 0 680252..681004 + 250 15639613 - TP0625 - hypothetical protein 623 49.15 0 681001..682176 + 391 15639614 - TP0626 - exonuclease, putative 624 46.56 -1 682173..685316 + 1047 15639615 - TP0627 - exonuclease (sbcC) 625 51.55 0 685313..686794 + 493 15639616 - TP0628 - nicotinate phosphoribosyltransferase 626 56.36 0 686965..687789 + 274 15639617 - TP0629 - hypothetical protein 627 49.78 0 687959..688870 + 303 15639618 - TP0630 - chemotaxis protein methyltransferase (cheR) 628 53.38 0 688917..690128 + 403 15639619 - TP0631 - protein-glutamate methylesterase (cheB) 629 56.61 0 690233..691246 + 337 15639620 - TP0632 - tryptophanyl-tRNA synthetase 630 53.20 0 691387..692262 + 291 15639621 - TP0633 - bifunctional methionine sulfoxide reductase B/A protein 631 51.17 0 692381..694852 + 823 15639622 - TP0634 - DNA ligase (lig) 632 51.10 0 694887..695657 - 256 15639623 - TP0636 - hypothetical protein 633 52.68 0 695695..696645 - 316 15639624 miaA TP0637 - tRNA delta(2)-isopentenylpyrophosphate transferase 634 55.40 0 696869..697303 - 144 15639625 - TP0638 - hypothetical protein 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.