version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 465 55.44 0 493027..493899 - 290 15639456 - TP0465 - hypothetical protein 466 45.73 -1 493832..495001 - 389 15639457 - TP0466 - hypothetical protein 467 53.01 0 494992..495240 + 82 15639458 - TP0467 - hypothetical protein 468 56.87 0 495210..495740 - 176 15639459 - TP0468 - hypothetical protein 469 57.65 +1 495698..497161 - 487 15639460 - TP0469 - hypothetical protein 470 62.52 +2 497154..498263 - 369 15639461 - TP0470 - hypothetical protein 471 53.62 0 498255..499664 + 469 15639462 - TP0471 - hypothetical protein 472 50.72 0 499677..501752 - 691 15639463 - TP0472 - excinuclease ABC, subunit C (uvrC) 473 48.84 0 501827..502471 - 214 15639464 - TP0473 - hypothetical protein 474 52.17 0 502536..503273 - 245 15639465 - TP0474 - hypothetical protein 475 53.73 0 503414..505021 - 535 15639466 pgi TP0475 - glucose-6-phosphate isomerase 476 52.41 0 505085..506431 - 448 15639467 - TP0476 - acetate kinase (ack) 477 56.34 0 506498..507223 - 241 15639468 - TP0477 - glucose-6-phosphate 1-dehydrogenase, putative 478 55.56 0 507284..508831 - 515 15639469 - TP0478 - glucose-6-phosphate 1-dehydrogenase 479 56.30 0 508904..509578 - 224 15639470 - TP0479 - hypothetical protein 480 56.44 0 509690..510178 + 162 15639471 - TP0480 - hypothetical protein 481 56.97 0 510210..511643 + 477 15639472 - TP0481 - hypothetical protein 482 60.31 +1 511610..512458 + 282 15639473 - TP0482 - hypothetical protein 483 52.44 0 512524..513648 - 374 15639474 - TP0483 - hypothetical protein 484 55.06 0 513635..515650 - 671 15639475 - TP0484 - hypothetical protein 485 52.36 0 515544..517388 - 614 15639476 - TP0485 - adenylate cyclase 486 60.34 +1 517526..518980 - 484 15639477 - TP0486 - antigen, p83/100 487 59.76 +1 519069..520646 - 525 15639478 - TP0487 - hypothetical protein 488 54.77 0 520874..523411 + 845 15639479 - TP0488 - methyl-accepting chemotaxis protein (mcp2-1) 489 48.50 -1 523859..524827 + 322 15639480 - TP0489 - hypothetical protein 490 55.03 0 524824..525012 + 62 15639481 - TP0490 - hypothetical protein 491 52.08 0 525019..526053 + 344 15639482 - TP0491 - hypothetical protein 492 51.05 0 526077..527894 + 605 15639483 - TP0492 - DNA primase (dnaG) 493 49.02 0 527891..529726 + 611 15639484 - TP0493 - RNA polymerase sigma factor RpoD 494 52.07 0 529736..530557 + 273 15639485 - TP0494 - hypothetical protein 495 54.67 0 530646..530795 - 49 15639486 - TP0495 - hypothetical protein 496 53.33 0 530887..531876 + 329 15639487 - TP0496 - hypothetical protein 497 50.82 0 531889..532923 + 344 15639488 - TP0497 - rod shape-determining protein (mreB) 498 48.15 -1 532928..533791 + 287 15639489 - TP0498 - rod shape-determining protein (mreC) 499 43.20 -2 533788..534294 + 168 15639490 - TP0499 - rod shape-determining protein (mreD) 500 48.43 -1 534295..536169 + 624 15639491 - TP0500 - penicillin-binding protein (pbp-1) 501 46.77 -1 536166..537467 + 433 15639492 - TP0501 - rod shape-determining protein (rodA) 502 50.61 0 537493..538389 + 298 15639493 - TP0502 - hypothetical protein 503 53.90 0 538368..538931 + 187 15639494 - TP0503 - hypothetical protein 504 60.28 +1 538913..539053 + 46 15639495 - TP0504 - hypothetical protein 505 53.63 0 539062..540396 - 444 15639496 - TP0505 - hexokinase (hxk) 506 54.25 0 541131..542459 + 442 15639497 tig TP0506 - trigger factor 507 52.94 0 542452..543063 + 203 15639498 - TP0507 - ATP-dependent Clp protease proteolytic component (clpP-1) 508 48.56 -1 543050..544297 + 415 15639499 clpX TP0508 - ATP-dependent protease ATP-binding subunit 509 51.32 0 544394..544960 + 188 15639500 - TP0509 - alkyl hydroperoxide reductase (ahpC) 510 52.20 0 545141..546958 - 605 15639501 - TP0510 - GTP-binding protein LepA 511 49.76 0 547001..547627 + 208 15639502 - TP0511 - transcription factor (carD) 512 57.08 0 547672..548871 + 399 15639503 - TP0512 - hypothetical protein 513 50.96 0 548945..550345 + 466 15639504 trkA TP0513 - potassium transporter peripheral membrane component 514 47.31 -1 550459..553341 + 960 15639505 - TP0514 - excinuclease ABC, subunit A (uvrA) 515 42.14 -2 553338..556313 + 991 15639506 - TP0515 - hypothetical protein 516 41.87 -2 556327..557907 - 526 15639507 - TP0516 - virulence factor (mviN) 517 46.87 -1 557904..558494 - 196 15639508 - TP0517 - Holliday junction nuclease (ruvC) 518 49.21 0 558476..559168 - 230 15639509 - TP0518 - hypothetical protein 519 42.99 -2 559165..560541 - 458 15639510 - TP0519 - response regulatory protein (atoC) 520 49.53 0 561736..563007 - 423 15639511 - TP0521 - DNA polymerase III, gamma and tau subunits, putative 521 45.62 -1 563018..563497 - 159 15639512 - TP0522 - hypothetical protein 522 52.90 0 563494..564648 - 384 15639513 - TP0523 - UDP-N-glucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (murG) 523 52.04 0 564652..567297 - 881 15639514 - TP0524 - ATP-dependent protease LA (lon-2) 524 49.82 0 567433..567996 + 187 15639515 - TP0525 - translation elongation factor P (efp) 525 49.48 0 568144..570150 + 668 15639516 - TP0526 - ATP-dependent helicase (hrpA) 526 52.70 0 570198..570827 - 209 15639517 - TP0527 - V-type ATPase, subunit D (atpD-2) 527 51.98 0 570922..572364 - 480 15639518 - TP0528 - V-type ATP synthase subunit B 528 54.62 0 572361..574178 - 605 15639519 - TP0529 - V-type ATP synthase subunit A 529 55.50 0 574175..574801 - 208 15639520 - TP0530 - V-type ATPase, subunit E, putative 530 57.23 +1 574807..575145 - 112 15639521 - TP0531 - V-type ATPase, subunit F, putative 531 53.41 0 575765..577129 - 454 15639522 - TP0533 - V-type ATPase, subunit I (atpI-2) 532 54.87 0 577122..578147 - 341 15639523 - TP0534 - hypothetical protein 533 60.09 +1 578151..578363 - 70 15639524 - TP0535 - hypothetical protein 534 57.96 +1 578504..578905 - 133 15639525 secG TP0536 - preprotein translocase subunit SecG 535 56.27 0 579055..579804 - 249 15639526 - TP0537 - triosephosphate isomerase (tpi) 536 53.97 0 579955..581214 - 419 15639527 pgk TP0538 - phosphoglycerate kinase 537 51.35 0 581186..581407 + 73 15639528 - TP0539 - hypothetical protein 538 50.27 0 581688..582059 + 123 15639529 - TP0540 - anti-sigma F factor antagonist (SpoIIAA-2) 539 55.10 0 582189..583148 + 319 15639530 era TP0541 - GTP-binding protein Era 540 53.08 0 583145..584866 - 573 15639531 - TP0542 - diphosphate--fructose-6-phosphate 1-phosphotransferase 541 52.05 0 584926..585609 - 227 15639532 - TP0543 - Holliday junction DNA helicase (ruvA) 542 50.94 0 585651..587519 - 622 15639533 - TP0544 - hypothetical protein 543 51.17 0 587544..588608 - 354 15639534 - TP0545 - methylgalactoside ABC transporter, periplasmic galactose-binding protein (mglB-1) 544 55.17 0 588693..590693 - 666 15639535 - TP0546 - periplasmic serine protease, putative 545 64.19 +2 590405..591535 - 376 15639536 - TP0547 - penicillin tolerance protein (lytB) 546 57.62 +1 591679..592983 + 434 15639537 - TP0548 - hypothetical protein 547 55.26 0 593081..595525 + 814 15639538 - TP0549 - ATPase (clpC) 548 56.18 0 595566..597053 - 495 15639539 trmE TP0550 - tRNA modification GTPase TrmE 549 57.12 0 597057..598145 - 362 15639540 - TP0551 - phosphatase 550 57.12 0 598158..598691 - 177 15639541 - TP0552 - hypothetical protein 551 47.69 -1 598935..600146 + 403 15639542 - TP0553 - hypothetical protein 552 54.56 0 600181..600849 + 222 15639543 - TP0554 - phosphoglycolate phosphatase (gph-2) 553 54.49 0 600913..602103 - 396 15639544 - TP0555 - glutamate/ aspartate transporter, putative 554 53.98 0 602326..603318 - 330 15639545 - TP0556 - asparagine synthetase AsnA 555 51.82 0 603423..604136 + 237 15639546 - TP0557 - hypothetical protein 556 56.44 0 604166..605074 + 302 15639547 - TP0558 - hypothetical protein 557 55.39 0 605136..606341 + 401 15639548 - TP0559 - hypothetical protein 558 54.78 0 606394..608379 - 661 15639549 - TP0560 - transketolase A (tktA) 559 59.39 +1 608490..609341 - 283 15639550 - TP0561 - hypothetical protein 560 57.08 0 609512..610648 + 378 15639551 - TP0562 - spore coat polysaccharide biosynthesis protein (spsE) 561 55.80 0 610639..611052 + 137 15639552 - TP0563 - hypothetical protein 562 51.69 0 611049..613085 + 678 15639553 - TP0564 - hypothetical protein 563 50.29 0 612967..614187 - 406 15639554 - TP0565 - hypothetical protein 564 45.50 -1 614198..615685 - 495 15639555 - TP0566 - alginate O-acetylation protein (algI) 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.