version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 414 59.36 +1 442204..442737 + 177 15639406 - TP0415 - hypothetical protein 415 55.04 0 442684..444042 - 452 15639407 - TP0416 - signal recognition particle protein (ffh) 416 57.38 +1 444035..445714 - 559 15639408 lnt TP0417 - apolipoprotein N-acyltransferase 417 54.52 0 445741..446934 + 397 15639409 - TP0418 - galactokinase 418 58.51 +1 446931..447494 + 187 15639410 - TP0419 - survival protein, putative 419 58.77 +1 447475..447702 + 75 15639411 - TP0420 - hypothetical protein 420 55.41 0 447836..449887 + 683 15639412 - TP0421 - hypothetical protein 421 57.21 +1 449871..450896 + 341 15639413 - TP0422 - hypothetical protein 422 55.64 0 450921..451727 + 268 15639414 - TP0423 - hypothetical protein 423 56.65 0 451930..452628 + 232 15639415 - TP0424 - V-type ATP synthase subunit E 424 60.15 +1 452606..452866 + 86 15639416 - TP0425 - hypothetical protein 425 54.01 0 453008..454777 + 589 15639417 - TP0426 - V-type ATP synthase subunit A 426 50.89 0 454781..456073 + 430 15639418 - TP0427 - V-type ATP synthase subunit B 427 50.56 0 456085..456705 + 206 15639419 - TP0428 - V-type ATP synthase subunit D 428 53.24 0 456702..458570 + 622 15639420 - TP0429 - V-type ATP synthase subunit I 429 54.14 0 458607..459029 + 140 15639421 - TP0430 - V-type ATP synthase subunit K 430 57.42 +1 459063..459884 + 273 15639422 - TP0431 - hypothetical protein 431 56.70 0 459927..460478 + 183 15639423 - TP0432 - hypothetical protein 432 58.50 +1 460533..461303 + 256 15639424 - TP0433 - hypothetical protein 433 59.80 +1 461245..461928 + 227 15639425 - TP0434 - hypothetical protein 434 55.84 0 462025..462495 - 156 15639426 - TP0435 - lipoprotein, 17 kDa (tpp17) 435 59.10 +1 462626..463708 - 360 15639427 - TP0436 - hypothetical protein 436 53.86 0 463674..464204 - 176 15639428 - TP0437 - hypothetical protein 437 58.40 +1 464234..465043 + 269 15639429 - TP0438 - hypothetical protein 438 54.39 0 465130..465642 + 170 15639430 - TP0439 - purine-binding chemotaxis protein (cheW-2) 439 56.34 0 465732..466883 + 383 15639431 - TP0440 - spore coat polysaccharide biosynthesis protein, putative 440 53.81 0 466880..467797 + 305 15639432 - TP0441 - hypothetical protein 441 55.11 0 467790..469511 + 573 15639433 - TP0442 - DNA repair protein (recN) 442 48.19 -1 469453..470307 + 284 15639434 - TP0443 - hypothetical protein 443 55.59 0 470313..471341 + 342 15639435 - TP0444 - hypothetical protein 444 59.52 +1 471477..472106 + 209 15639436 - TP0445 - 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ) 445 52.02 0 472148..473362 + 404 15639437 - TP0446 - gcpE protein (gcpE) 446 50.58 0 473359..474483 + 374 15639438 - TP0447 - hypothetical protein 447 44.78 -1 474541..475623 + 360 15639439 - TP0448 - uracil phosphoribosyltransferase, putative 448 44.16 -2 475627..476217 + 196 15639440 - TP0449 - hypothetical protein 449 49.42 0 476354..478405 + 683 15639441 - TP0450 - elongation factor G 450 51.37 0 478394..478576 - 60 15639442 - TP0451 - hypothetical protein 451 51.26 0 478421..478777 + 118 15640030 - TP0451a - permease 452 48.84 0 478855..482130 + 1091 15639443 ileS TP0452 - isoleucyl-tRNA synthetase 453 46.30 -1 482117..482980 + 287 15639444 - TP0453 - hypothetical protein 454 55.80 0 483330..484019 - 229 15639445 - TP0454 - hypothetical protein 455 52.74 0 484016..485020 - 334 15639446 - TP0455 - hypothetical protein 456 59.23 +1 485077..486393 - 438 15639447 - TP0456 - hypothetical protein 457 58.02 +1 486461..488242 + 593 15639448 - TP0457 - hypothetical protein 458 58.55 +1 488333..488911 + 192 15639449 - TP0458 - hypothetical protein 459 59.67 +1 488940..489725 + 261 15639450 - TP0459 - hypothetical protein 460 59.04 +1 489768..490475 + 235 15639451 - TP0460 - hypothetical protein 461 57.78 +1 490476..490835 + 119 15639452 - TP0461 - hypothetical protein 462 56.11 0 491040..491882 + 280 15639453 - TP0462 - hypothetical protein 463 56.76 0 491887..492219 + 110 15639454 - TP0463 - hypothetical protein 464 61.62 +2 492278..493030 - 250 15639455 - TP0464 - hypothetical protein 465 55.44 0 493027..493899 - 290 15639456 - TP0465 - hypothetical protein 466 45.73 -1 493832..495001 - 389 15639457 - TP0466 - hypothetical protein 467 53.01 0 494992..495240 + 82 15639458 - TP0467 - hypothetical protein 468 56.87 0 495210..495740 - 176 15639459 - TP0468 - hypothetical protein 469 57.65 +1 495698..497161 - 487 15639460 - TP0469 - hypothetical protein 470 62.52 +2 497154..498263 - 369 15639461 - TP0470 - hypothetical protein 471 53.62 0 498255..499664 + 469 15639462 - TP0471 - hypothetical protein 472 50.72 0 499677..501752 - 691 15639463 - TP0472 - excinuclease ABC, subunit C (uvrC) 473 48.84 0 501827..502471 - 214 15639464 - TP0473 - hypothetical protein 474 52.17 0 502536..503273 - 245 15639465 - TP0474 - hypothetical protein 475 53.73 0 503414..505021 - 535 15639466 pgi TP0475 - glucose-6-phosphate isomerase 476 52.41 0 505085..506431 - 448 15639467 - TP0476 - acetate kinase (ack) 477 56.34 0 506498..507223 - 241 15639468 - TP0477 - glucose-6-phosphate 1-dehydrogenase, putative 478 55.56 0 507284..508831 - 515 15639469 - TP0478 - glucose-6-phosphate 1-dehydrogenase 479 56.30 0 508904..509578 - 224 15639470 - TP0479 - hypothetical protein 480 56.44 0 509690..510178 + 162 15639471 - TP0480 - hypothetical protein 481 56.97 0 510210..511643 + 477 15639472 - TP0481 - hypothetical protein 482 60.31 +1 511610..512458 + 282 15639473 - TP0482 - hypothetical protein 483 52.44 0 512524..513648 - 374 15639474 - TP0483 - hypothetical protein 484 55.06 0 513635..515650 - 671 15639475 - TP0484 - hypothetical protein 485 52.36 0 515544..517388 - 614 15639476 - TP0485 - adenylate cyclase 486 60.34 +1 517526..518980 - 484 15639477 - TP0486 - antigen, p83/100 487 59.76 +1 519069..520646 - 525 15639478 - TP0487 - hypothetical protein 488 54.77 0 520874..523411 + 845 15639479 - TP0488 - methyl-accepting chemotaxis protein (mcp2-1) 489 48.50 -1 523859..524827 + 322 15639480 - TP0489 - hypothetical protein 490 55.03 0 524824..525012 + 62 15639481 - TP0490 - hypothetical protein 491 52.08 0 525019..526053 + 344 15639482 - TP0491 - hypothetical protein 492 51.05 0 526077..527894 + 605 15639483 - TP0492 - DNA primase (dnaG) 493 49.02 0 527891..529726 + 611 15639484 - TP0493 - RNA polymerase sigma factor RpoD 494 52.07 0 529736..530557 + 273 15639485 - TP0494 - hypothetical protein 495 54.67 0 530646..530795 - 49 15639486 - TP0495 - hypothetical protein 496 53.33 0 530887..531876 + 329 15639487 - TP0496 - hypothetical protein 497 50.82 0 531889..532923 + 344 15639488 - TP0497 - rod shape-determining protein (mreB) 498 48.15 -1 532928..533791 + 287 15639489 - TP0498 - rod shape-determining protein (mreC) 499 43.20 -2 533788..534294 + 168 15639490 - TP0499 - rod shape-determining protein (mreD) 500 48.43 -1 534295..536169 + 624 15639491 - TP0500 - penicillin-binding protein (pbp-1) 501 46.77 -1 536166..537467 + 433 15639492 - TP0501 - rod shape-determining protein (rodA) 502 50.61 0 537493..538389 + 298 15639493 - TP0502 - hypothetical protein 503 53.90 0 538368..538931 + 187 15639494 - TP0503 - hypothetical protein 504 60.28 +1 538913..539053 + 46 15639495 - TP0504 - hypothetical protein 505 53.63 0 539062..540396 - 444 15639496 - TP0505 - hexokinase (hxk) 506 54.25 0 541131..542459 + 442 15639497 tig TP0506 - trigger factor 507 52.94 0 542452..543063 + 203 15639498 - TP0507 - ATP-dependent Clp protease proteolytic component (clpP-1) 508 48.56 -1 543050..544297 + 415 15639499 clpX TP0508 - ATP-dependent protease ATP-binding subunit 509 51.32 0 544394..544960 + 188 15639500 - TP0509 - alkyl hydroperoxide reductase (ahpC) 510 52.20 0 545141..546958 - 605 15639501 - TP0510 - GTP-binding protein LepA 511 49.76 0 547001..547627 + 208 15639502 - TP0511 - transcription factor (carD) 512 57.08 0 547672..548871 + 399 15639503 - TP0512 - hypothetical protein 513 50.96 0 548945..550345 + 466 15639504 trkA TP0513 - potassium transporter peripheral membrane component 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.