version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 348 57.63 +1 373895..374425 - 176 15639340 - TP0349 - peptidyl-prolyl cis-trans isomerase, FKBP-type (slyD) 349 55.71 0 374639..375925 + 428 15639341 - TP0350 - glutamate-5-semialdehyde dehydrogenase (proA) 350 55.89 0 375922..376812 + 296 15639342 - TP0351 - gamma-glutamyl kinase 351 52.71 0 376944..377201 + 85 15639343 - TP0352 - hypothetical protein 352 60.00 +1 377198..377707 - 169 15639344 - TP0353 - ribonuclease H (rnhA) 353 47.21 -1 377970..378596 + 208 15639345 - TP0354 - thymidylate kinase (tmk) 354 47.66 -1 378563..378946 - 127 15639346 - TP0355 - hypothetical protein 355 47.80 -1 379151..379468 + 105 15639347 - TP0356 - RNA-binding protein, putative 356 58.84 +1 379570..380310 + 246 15639348 - TP0357 - biotin--acetyl-CoA-carboxylase ligase (birA) 357 51.87 0 380315..381895 - 526 15639349 - TP0358 - hypothetical protein 358 52.52 0 381907..382542 - 211 15639350 - TP0359 - hypothetical protein 359 54.80 0 382753..382929 + 58 15639351 - TP0360 - hypothetical protein 360 57.60 +1 382926..383774 - 282 15639352 - TP0361 - lysophosphatidic acid acyltransferase, putative 361 59.92 +1 383850..384086 + 78 15639353 - TP0362 - ribosomal protein L28 (rpmB) 362 54.24 0 384578..387016 + 812 15639354 - TP0363 - chemotaxis histidine kinase (cheA) 363 52.12 0 387010..388377 + 455 15639355 - TP0364 - purine-binding chemotaxis protein (cheW-1) 364 52.26 0 388399..388863 + 154 15639356 - TP0365 - chemotaxis protein (cheX) 365 48.28 -1 388876..389310 + 144 15639357 - TP0366 - chemotaxis response regulator (cheY) 366 52.44 0 389614..392439 + 941 15639358 - TP0367 - chromosome segregation protein, putative 367 59.23 +1 392439..392774 + 111 15639359 - TP0368 - hypothetical protein 368 59.06 +1 392771..394321 + 516 15639360 - TP0369 - hypothetical protein 369 50.60 0 394389..394805 - 138 15639361 - TP0370 - hypothetical protein 370 58.11 +1 394779..395654 + 291 15639362 - TP0371 - hypothetical protein 371 55.84 0 395776..396366 + 196 15639363 - TP0372 - 50S ribosomal protein L25/general stress protein Ctc 372 56.90 0 396426..397859 + 477 15639364 - TP0373 - hypothetical protein 373 54.29 0 397795..400170 + 791 15639365 - TP0374 - hypothetical protein 374 50.00 0 400328..400537 + 69 15639366 - TP0375 - hypothetical protein 375 53.31 0 400853..401758 - 301 15639367 - TP0376 - hypothetical protein 376 55.56 0 401827..401952 + 41 15639368 - TP0377 - hypothetical protein 377 53.02 0 401949..402329 + 126 15639369 - TP0378 - flagellar protein, putative 378 51.76 0 402404..405154 - 916 15639370 secA TP0379 - preprotein translocase subunit SecA 379 54.81 0 405261..407081 - 606 15639371 - TP0380 - DNA repair helicase, putative 380 54.11 0 407219..407935 - 238 15639372 - TP0381 - hypothetical protein 381 58.54 +1 408019..408141 + 40 15639373 - TP0382 - hypothetical protein 382 58.22 +1 408169..408618 + 149 15639374 - TP0383 - cell division protein MraZ 383 59.56 +1 408615..409754 + 379 15639375 - TP0384 - hypothetical protein 384 54.93 0 409767..410141 + 124 15639376 - TP0385 - hypothetical protein 385 52.03 0 410125..411504 + 459 15639377 - TP0386 - UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase (murF) 386 42.34 -2 411501..412655 + 384 15639378 - TP0387 - cell division protein (ftsW) 387 45.83 -1 412633..413448 + 271 15639379 - TP0388 - cell division protein (ftsQ) 388 49.40 0 413461..414705 + 414 15639380 - TP0389 - cell division protein (ftsA) 389 50.28 0 414751..416007 + 418 15639381 - TP0390 - cell division protein FtsZ 390 50.38 0 416004..416924 + 306 15639382 - TP0391 - integrase/recombinase (codV) 391 50.62 0 416707..417666 + 319 15639383 - TP0392 - hypothetical protein 392 49.72 0 417663..418571 + 302 15639384 - TP0393 - smf protein (smf) 393 47.81 -1 418604..420799 + 731 15639385 - TP0394 - DNA topoisomerase I (topA) 394 51.79 0 420792..421685 + 297 15639386 - TP0395 - integrase/recombinase (xprB) 395 48.18 -1 421833..422243 + 136 15639387 - TP0396 - flagellar basal-body rod protein (flgB) 396 50.77 0 422328..422717 + 129 15639388 flgC TP0397 - flagellar basal body rod protein FlgC 397 48.00 -1 422773..423147 + 124 15639389 fliE TP0398 - flagellar hook-basal body protein FliE 398 50.12 0 423264..424967 + 567 15639390 fliF TP0399 - flagellar MS-ring protein 399 45.51 -1 424972..426030 + 352 15639391 fliG TP0400 - flagellar motor switch protein G 400 51.08 0 426078..427007 + 309 15639392 fliH TP0401 - flagellar assembly protein H 401 55.36 0 427035..428378 + 447 15639393 - TP0402 - flagellum-specific ATP synthase (fliI) 402 53.64 0 428407..428859 + 150 15639394 - TP0403 - flagellar protein, putative 403 54.68 0 428856..429389 - 177 15639395 - TP0404 - hypothetical protein 404 48.22 -1 429386..429835 - 149 15639396 - TP0405 - mcbG protein, putative 405 53.16 0 430026..430832 + 268 15639397 - TP0406 - glutamate racemase (murI) 406 56.15 0 430960..431634 + 224 15639398 - TP0407 - phosphoglycolate phosphatase (gph-1) 407 50.32 0 431713..434967 + 1084 15639399 - TP0408 - hypothetical protein 408 52.15 0 435007..435192 + 61 15639400 - TP0409 - hypothetical protein 409 53.60 0 435457..437208 + 583 15639401 secD TP0410 - preprotein translocase subunit SecD 410 54.24 0 437205..438467 + 420 15639402 secF TP0411 - preprotein translocase subunit SecF 411 47.39 -1 438543..438848 - 101 15639403 - TP0412 - hypothetical protein 412 54.50 0 438867..440765 - 632 15639404 - TP0413 - phosphoglucomutase 413 56.19 0 440868..442223 + 451 15639405 - TP0414 - D-alanine glycine permease (dagA) 414 59.36 +1 442204..442737 + 177 15639406 - TP0415 - hypothetical protein 415 55.04 0 442684..444042 - 452 15639407 - TP0416 - signal recognition particle protein (ffh) 416 57.38 +1 444035..445714 - 559 15639408 lnt TP0417 - apolipoprotein N-acyltransferase 417 54.52 0 445741..446934 + 397 15639409 - TP0418 - galactokinase 418 58.51 +1 446931..447494 + 187 15639410 - TP0419 - survival protein, putative 419 58.77 +1 447475..447702 + 75 15639411 - TP0420 - hypothetical protein 420 55.41 0 447836..449887 + 683 15639412 - TP0421 - hypothetical protein 421 57.21 +1 449871..450896 + 341 15639413 - TP0422 - hypothetical protein 422 55.64 0 450921..451727 + 268 15639414 - TP0423 - hypothetical protein 423 56.65 0 451930..452628 + 232 15639415 - TP0424 - V-type ATP synthase subunit E 424 60.15 +1 452606..452866 + 86 15639416 - TP0425 - hypothetical protein 425 54.01 0 453008..454777 + 589 15639417 - TP0426 - V-type ATP synthase subunit A 426 50.89 0 454781..456073 + 430 15639418 - TP0427 - V-type ATP synthase subunit B 427 50.56 0 456085..456705 + 206 15639419 - TP0428 - V-type ATP synthase subunit D 428 53.24 0 456702..458570 + 622 15639420 - TP0429 - V-type ATP synthase subunit I 429 54.14 0 458607..459029 + 140 15639421 - TP0430 - V-type ATP synthase subunit K 430 57.42 +1 459063..459884 + 273 15639422 - TP0431 - hypothetical protein 431 56.70 0 459927..460478 + 183 15639423 - TP0432 - hypothetical protein 432 58.50 +1 460533..461303 + 256 15639424 - TP0433 - hypothetical protein 433 59.80 +1 461245..461928 + 227 15639425 - TP0434 - hypothetical protein 434 55.84 0 462025..462495 - 156 15639426 - TP0435 - lipoprotein, 17 kDa (tpp17) 435 59.10 +1 462626..463708 - 360 15639427 - TP0436 - hypothetical protein 436 53.86 0 463674..464204 - 176 15639428 - TP0437 - hypothetical protein 437 58.40 +1 464234..465043 + 269 15639429 - TP0438 - hypothetical protein 438 54.39 0 465130..465642 + 170 15639430 - TP0439 - purine-binding chemotaxis protein (cheW-2) 439 56.34 0 465732..466883 + 383 15639431 - TP0440 - spore coat polysaccharide biosynthesis protein, putative 440 53.81 0 466880..467797 + 305 15639432 - TP0441 - hypothetical protein 441 55.11 0 467790..469511 + 573 15639433 - TP0442 - DNA repair protein (recN) 442 48.19 -1 469453..470307 + 284 15639434 - TP0443 - hypothetical protein 443 55.59 0 470313..471341 + 342 15639435 - TP0444 - hypothetical protein 444 59.52 +1 471477..472106 + 209 15639436 - TP0445 - 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme (thiJ) 445 52.02 0 472148..473362 + 404 15639437 - TP0446 - gcpE protein (gcpE) 446 50.58 0 473359..474483 + 374 15639438 - TP0447 - hypothetical protein 447 44.78 -1 474541..475623 + 360 15639439 - TP0448 - uracil phosphoribosyltransferase, putative 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0