version 1.0
Treponema pallidum subsp. pallidum str. Nichols, complete genome - 1..1138011 1036 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 136 53.62 0 158258..158395 + 45 15639131 - TP0137 - hypothetical protein 137 49.05 0 158533..159270 - 245 15639132 - TP0138 - hypothetical protein 138 48.05 -1 159278..159970 - 230 15639133 - TP0139 - hypothetical protein 139 47.16 -1 160010..161737 - 575 15639134 - TP0140 - K+ transport protein (ntpJ) 140 55.99 0 161909..162442 + 177 15639135 - TP0141 - methylated-DNA-protein-cysteine S-methyltransferase (dat) 141 51.73 0 162393..163055 - 220 15639136 - TP0142 - thiamine ABC transporter, ATP-binding protein, putative 142 53.20 0 163048..164829 - 593 15639137 - TP0143 - thiamine ABC transporter, permease protein, putative 143 57.74 +1 164787..165794 - 335 15639138 - TP0144 - thiamine ABC transporter, thiamine-binding periplasmic protein, putative 144 53.83 0 165904..167874 + 656 15639139 - TP0145 - long-chain-fatty-acid--CoA ligase 145 44.84 -1 169279..171138 - 619 15639140 - TP0147 - alpha-amylase 1, putative 146 51.30 0 171135..171713 - 192 15639141 - TP0148 - hypothetical protein 147 50.17 0 171707..172300 - 197 15639142 - TP0149 - hypothetical protein 148 49.15 0 172293..172760 - 155 15639143 - TP0150 - hypothetical protein 149 54.51 0 172744..173763 - 339 15639144 - TP0151 - hypothetical protein 150 57.41 +1 173750..175294 - 514 15639145 - TP0152 - nitrogen fixation protein (rnfC) 151 54.88 0 175370..175861 - 163 15639146 - TP0153 - hypothetical protein 152 58.57 +1 176086..177123 + 345 15639147 - TP0154 - hypothetical protein 153 52.33 0 177129..178244 + 371 15639148 - TP0155 - hypothetical protein 154 51.11 0 178285..178689 - 134 15639149 - TP0156 - hypothetical protein 155 50.17 0 178686..179588 - 300 15639150 - TP0157 - hypothetical protein 156 48.76 0 179585..180271 - 228 15639151 - TP0158 - hypothetical protein 157 51.51 0 180275..181303 - 342 15639152 - TP0159 - hypothetical protein 158 55.99 0 181419..183272 - 617 15639153 - TP0160 - prolyl-tRNA synthetase 159 55.91 0 183275..183367 - 30 15639154 - TP0161 - hypothetical protein 160 58.59 +1 183384..184436 - 350 15639155 ruvB TP0162 - Holliday junction DNA helicase B 161 53.51 0 184611..185537 + 308 15639156 - TP0163 - ABC transporter, periplasmic binding protein (troA) 162 53.43 0 185685..186485 + 266 15639157 - TP0164 - ABC transporter, ATP-binding protein (troB) 163 51.62 0 186457..187353 + 298 15639158 - TP0165 - ABC transporter, permease protein (troC) 164 52.26 0 187357..188460 + 367 15639159 - TP0166 - ABC transporter, permease protein (troD) 165 50.87 0 188470..188931 + 153 15639160 - TP0167 - cation-activated repressor protein (troR) 166 51.46 0 189011..189766 + 251 15639161 - TP0168 - phosphoglycerate mutase (pgm) 167 55.56 0 189990..190088 + 32 15639162 - TP0169 - hypothetical protein 168 54.81 0 190085..190894 + 269 15639163 - TP0170 - pfs protein (pfs) 169 52.68 0 190994..191422 + 142 15639164 - TP0171 - lipoprotein, 15 kDa (tpp15) 170 54.73 0 191570..192097 - 175 15639165 - TP0172 - hypothetical protein 171 50.88 0 192132..192815 - 227 15639166 - TP0173 - hypothetical protein 172 44.25 -2 192784..193626 - 280 15639167 - TP0174 - hypothetical protein 173 43.60 -2 193376..194008 - 210 15639168 - TP0175 - hypothetical protein 174 45.69 -1 194039..194305 - 88 15639169 - TP0176 - hypothetical protein 175 48.74 0 194302..195612 - 436 15639170 - TP0177 - hypothetical protein 176 57.82 +1 195706..196632 - 308 15639171 - TP0178 - hypothetical protein 177 60.83 +1 196632..198515 - 627 15639172 - TP0179 - hypothetical protein 178 59.12 +1 198457..198615 - 52 15639173 - TP0180 - hypothetical protein 179 56.08 0 198608..199051 + 147 15639174 - TP0181 - hypothetical protein 180 60.26 +1 198891..199670 + 259 15639175 - TP0182 - hypothetical protein 181 56.62 0 199673..200518 - 281 15639176 - TP0183 - hypothetical protein 182 55.27 0 200523..200987 - 154 161579587 smpB TP0184 - SsrA-binding protein 183 53.39 0 201075..201782 + 235 15639178 - TP0185 - signal peptidase I (sip) 184 54.48 0 201837..203018 + 393 15639179 - TP0186 - oxygen-independent coproporphyrinogen III oxidase, putative 185 50.59 0 203382..204569 + 395 161579586 - TP0187 - elongation factor Tu 186 52.75 0 204641..204949 + 102 15639181 rpsJ TP0188 - 30S ribosomal protein S10 187 54.07 0 204996..205622 + 208 15639182 rplC TP0189 - 50S ribosomal protein L3 188 49.31 0 205636..206286 + 216 15639183 rplD TP0190 - 50S ribosomal protein L4 189 52.28 0 206273..206557 + 94 15639184 rplW TP0191 - 50S ribosomal protein L23 190 56.20 0 206613..207434 + 273 15639185 rplB TP0192 - 50S ribosomal protein L2 191 47.22 -1 207444..207731 + 95 15639186 rpsS TP0193 - 30S ribosomal protein S19 192 52.80 0 207740..208114 + 124 15639187 rplV TP0194 - 50S ribosomal protein L22 193 51.34 0 208098..208841 + 247 15639188 rpsC TP0195 - 30S ribosomal protein S3 194 52.86 0 208845..209264 + 139 15639189 rplP TP0196 - 50S ribosomal protein L16 195 45.21 -1 209279..209497 + 72 15639190 - TP0197 - ribosomal protein L29 (rpmC) 196 52.94 0 209512..209766 + 84 15639191 rpsQ TP0198 - 30S ribosomal protein S17 197 48.51 -1 209779..210147 + 122 15639192 rplN TP0199 - 50S ribosomal protein L14 198 50.64 0 210159..210470 + 103 15639193 rplX TP0200 - 50S ribosomal protein L24 199 46.42 -1 210467..211024 + 185 15639194 rplE TP0201 - 50S ribosomal protein L5 200 53.76 0 211036..211221 + 61 15639195 rpsN TP0202 - 30S ribosomal protein S14 201 49.12 0 211237..211635 + 132 15639196 rpsH TP0203 - 30S ribosomal protein S8 202 51.85 0 211645..212184 + 179 15639197 rplF TP0204 - 50S ribosomal protein L6 203 49.86 0 212193..212555 + 120 15639198 rplR TP0205 - 50S ribosomal protein L18 204 51.83 0 212564..213082 + 172 15639199 rpsE TP0206 - 30S ribosomal protein S5 205 56.99 0 213085..213270 + 61 15640028 rpmD TP0206a - 50S ribosomal protein L30 206 56.71 0 213270..213731 + 153 15639200 rplO TP0207 - 50S ribosomal protein L15 207 49.08 0 213739..215091 + 450 15639201 secY TP0208 - preprotein translocase subunit SecY 208 40.35 -2 215096..215209 + 37 15639202 rpmJ TP0209 - 50S ribosomal protein L36 209 46.99 -1 215225..215590 + 121 15639203 rpsM TP0210 - 30S ribosomal protein S13 210 52.23 0 215608..215988 + 126 15639204 - TP0211 - 30S ribosomal protein S11 211 49.34 0 216003..217058 + 351 15639205 - TP0212 - DNA-directed RNA polymerase subunit alpha 212 52.32 0 217048..217542 + 164 15639206 rplQ TP0213 - 50S ribosomal protein L17 213 57.58 +1 217566..217763 + 65 15639207 - TP0214 - hypothetical protein 214 57.62 +1 217969..218631 + 220 15639208 - TP0215 - grpE protein (grpE) 215 51.57 0 218747..220654 + 635 15639209 dnaK TP0216 - molecular chaperone DnaK 216 54.00 0 220775..222024 + 416 15640026 dnaJ TP0217 - heat shock protein 217 46.39 -1 222201..223670 + 489 15639210 - TP0218 - sigma factor SigB regulation protein, putative 218 41.67 -2 223674..225821 + 715 15639211 - TP0219 - sigma factor SigG regulation protein, putative 219 48.62 0 225850..226176 + 108 15639212 - TP0220 - anti-sigma F factor antagonist (SpoIIAA-1) 220 55.94 0 226177..226959 + 260 15639213 - TP0221 - D,D-carboxypeptidase, putative 221 52.57 0 226969..227415 + 148 15639214 - TP0222 - hypothetical protein 222 53.29 0 227683..228990 + 435 15639215 - TP0223 - hypothetical protein 223 48.57 -1 229027..229131 + 34 15639216 - TP0224 - hypothetical protein 224 51.42 0 229177..229917 + 246 15639217 - TP0225 - leucine-rich repeat-containing protein 225 49.05 0 235069..235755 - 228 15639218 - TP0226 - hypothetical protein 226 52.86 0 235808..236575 - 255 15639219 - TP0227 - cobalt ABC transporter, ATP-binding protein 227 55.64 0 236642..237457 - 271 15639220 - TP0228 - biotin synthase, putative 228 55.52 0 237401..238234 + 277 15639221 - TP0229 - DNA polymerase 229 56.28 0 238239..240212 + 657 15639222 - TP0230 - primosomal protein N (priA) 230 54.99 0 240313..240963 + 216 15639223 - TP0231 - hypothetical protein 231 55.56 0 241063..241179 + 38 15639224 - TP0232 - hypothetical protein 232 45.24 -1 241210..241755 + 181 15639225 - TP0233 - anti-sigma F factor antagonist, putative 233 49.71 0 241990..242160 + 56 15639226 rpmG TP0234 - 50S ribosomal protein L33 234 53.89 0 242310..242489 + 59 15639227 secE TP0235 - preprotein translocase subunit SecE 235 52.87 0 242499..243056 + 185 15639228 - TP0236 - transcription antitermination protein (nusG) 52.88 MEAN 4.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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