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Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 48 30.82 -1 57277..57912 - 211 42525567 - TDE0048 - hypothetical protein 49 36.48 0 58289..59179 - 296 42525568 - TDE0049 - hypothetical protein 50 41.32 0 59373..60161 - 262 42525569 - TDE0050 - RNA methyltransferase 51 40.19 0 60163..61314 - 383 42525570 - TDE0051 - alcohol dehydrogenase, iron-containing 52 36.30 0 61445..61714 + 89 42525571 fliQ TDE0052 - flagellar biosynthetic protein FliQ 53 39.25 0 61733..62527 + 264 42525572 fliR TDE0053 - flagellar biosynthetic protein FliR 54 39.13 0 62524..63696 + 390 42525573 flhB TDE0054 - flagellar biosynthesis protein FlhB 55 42.35 0 63705..65801 + 698 42525574 flhA TDE0055 - flagellar biosynthesis protein FlhA 56 40.10 0 65846..66052 + 68 42525575 - TDE0056 - DNA-directed RNA polymerase, omega subunit, putative 57 42.25 0 66075..67061 + 328 42525576 miaA-1 TDE0057 - tRNA delta(2)-isopentenylpyrophosphate transferase 58 43.54 +1 67126..67458 + 110 42525577 - TDE0058 - hypothetical protein 59 39.81 0 67434..67541 + 35 42525578 - TDE0059 - hypothetical protein 60 35.26 0 67617..67928 - 103 42525579 - TDE0060 - hypothetical protein 61 37.92 0 67988..69034 - 348 42525580 - TDE0061 - fic family protein 62 39.84 0 69230..69721 + 163 42525581 - TDE0062 - PTS system, IIA component 63 36.46 0 69854..71389 + 511 42525582 - TDE0063 - hypothetical protein 64 42.29 0 71425..72741 - 438 42525583 pfk TDE0064 - diphosphate--fructose-6-phosphate 1-phosphotransferase 65 33.71 0 72912..73436 - 174 42525584 - TDE0065 - hypothetical protein 66 34.69 0 73426..74016 - 196 42525585 - TDE0066 - hypothetical protein 67 40.54 0 74031..75278 - 415 42525586 - TDE0067 - cyclic nucleotide-binding protein 68 42.23 0 75437..76672 + 411 42525587 - TDE0068 - succinyl-diaminopimelate desuccinylase 69 42.48 0 76691..77707 + 338 42525588 - TDE0069 - hypothetical protein 70 34.90 0 77853..78680 + 275 42525589 - TDE0070 - sigma-70 family RNA polymerase sigma factor 71 42.08 0 78742..80982 + 746 42525590 - TDE0071 - U32 family peptidase 72 35.34 0 81061..83199 + 712 42525591 - TDE0072 - methyl-accepting chemotaxis protein 73 35.71 0 83249..84172 - 307 42525592 - TDE0073 - riboflavin biosynthesis protein RibF, putative 74 36.53 0 84246..85589 - 447 42525593 - TDE0074 - amino acid permease family protein 75 41.83 0 85617..86663 - 348 42525594 - TDE0075 - sorbitol dehydrogenase, putative 76 42.36 0 86679..87476 - 265 42525595 - TDE0076 - aldolase 77 37.99 0 87512..88822 - 436 42525596 grdE-1 TDE0077 - glycine reductase complex proprotein GrdE1 78 40.84 0 88835..90166 - 443 42525597 grdB-1 TDE0078 - glycine reductase complex selenoprotein GrdB1 79 35.42 0 90185..90760 - 191 42525598 - TDE0079 - DNA-binding protein 80 39.60 0 90818..92302 - 494 42525599 gbsA TDE0080 - betaine aldehyde dehydrogenase 81 36.21 0 92643..94031 - 462 42525600 - TDE0081 - hypothetical protein 82 37.74 0 94024..94341 - 105 42525601 - TDE0082 - MerR family transcriptional regulator 83 40.32 0 94344..95774 - 476 42525602 engA TDE0083 - GTP-binding protein EngA 84 39.78 0 95761..97545 - 594 42525603 ptsI TDE0084 - phosphoenolpyruvate-protein phosphotransferase 85 33.27 0 97686..101105 - 1139 42525604 - TDE0085 - ATP-dependent DNA helicase UvrD 86 32.45 0 101129..103966 - 945 42525605 - TDE0086 - hypothetical protein 87 39.26 0 104079..105479 + 466 42525606 trkA TDE0087 - potassium transporter peripheral membrane component 88 42.76 0 105487..106929 + 480 42525607 trkH TDE0088 - Trk system potassium uptake protein TrkH 89 37.98 0 106965..108644 - 559 42525608 - TDE0089 - transglutaminase-like domain-containing protein 90 34.84 0 108634..109296 - 220 42525609 - TDE0090 - hypothetical protein 91 38.31 0 109280..109822 - 180 42525610 - TDE0091 - RNA polymerase sigma-24 factor, putative 92 39.15 0 109867..111345 - 492 42525611 cysS TDE0092 - cysteinyl-tRNA synthetase 93 39.20 0 111397..112368 + 323 42525612 - TDE0093 - UDP-N-acetylenolpyruvoylglucosamine reductase, putative 94 24.00 -2 112359..112508 + 49 42525613 - TDE0094 - hypothetical protein 95 34.03 0 112539..112682 + 47 42525614 - TDE0095 - hypothetical protein 96 40.00 0 112863..114197 + 444 42525615 - TDE0096 - NADH oxidase 97 28.57 -1 114337..114861 + 174 42525616 - TDE0097 - hypothetical protein 98 34.44 0 114932..115651 - 239 42525617 - TDE0098 - hypothetical protein 99 35.35 0 115788..117074 + 428 42525618 - TDE0099 - adenine-specific DNA modification methyltransferase 100 41.30 0 117064..119034 - 656 42525619 - TDE0100 - hypothetical protein 101 38.00 0 119107..121251 - 714 42525620 - TDE0101 - alpha-amylase family protein 102 35.73 0 121315..122607 + 430 42525621 - TDE0102 - cyclic nucleotide-binding protein 103 40.33 0 122634..123776 - 380 42525622 - TDE0103 - aminotransferase, class-V 104 39.63 0 123773..124804 - 343 42525623 - TDE0104 - 3-dehydroquinate synthase 105 39.70 0 124822..125544 - 240 42525624 - TDE0105 - MTA/SAH nucleosidase 106 39.50 0 125632..126636 - 334 42525625 - TDE0106 - hypothetical protein 107 38.13 0 126731..128356 - 541 42525626 - TDE0107 - alpha-amylase family protein 108 32.36 0 128539..128847 + 102 42525627 - TDE0108 - hypothetical protein 109 42.57 0 128923..130470 - 515 42525628 pheS TDE0109 - phenylalanyl-tRNA synthetase subunit alpha 110 41.28 0 130721..131752 + 343 42525629 - TDE0110 - M23/M37 peptidase domain-containing protein 111 42.62 0 131755..132174 + 139 42525630 - TDE0111 - hypothetical protein 112 34.76 0 132184..132744 + 186 42525631 - TDE0112 - hypothetical protein 113 38.91 0 132755..133669 + 304 42525632 - TDE0113 - tpl protein 114 37.38 0 133671..134090 - 139 42525633 - TDE0114 - iron-dependent transcriptional regulator 115 34.72 0 134194..134841 + 215 42525634 - TDE0115 - hypothetical protein 116 38.55 0 134849..135730 + 293 42525635 - TDE0116 - hypothetical protein 117 33.55 0 135753..136667 + 304 42525636 - TDE0117 - putative lipoprotein 118 38.19 0 136664..137137 - 157 42525637 - TDE0118 - hypothetical protein 119 37.19 0 137148..137588 - 146 42525638 fliS TDE0119 - flagellar protein FliS 120 41.50 0 137788..138987 + 399 42525639 - TDE0120 - hypothetical protein 121 36.85 0 139010..140575 + 521 42525640 - TDE0121 - hypothetical protein 122 42.31 0 140616..141629 - 337 42525641 - TDE0122 - dihydrouridine synthase, putative 123 38.91 0 141633..142313 - 226 42525642 - TDE0123 - hypothetical protein 124 36.67 0 142334..142963 - 209 42525643 - TDE0124 - rhomboid family protein 125 32.71 0 142985..144100 - 371 42525644 - TDE0125 - GGDEF domain-containing protein 126 33.39 0 144081..145727 - 548 42525645 - TDE0126 - hypothetical protein 127 32.70 0 145890..146204 + 104 42525646 - TDE0127 - DNA-binding protein 128 33.58 0 146380..148785 + 801 42525647 - TDE0128 - HAMP domain/GGDEF domain/EAL domain-containing protein 129 41.54 0 148782..150389 - 535 42525648 pyrB TDE0129 - bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit 130 40.32 0 150685..152058 + 457 42525649 - TDE0130 - sodium/dicarboxylate symporter family protein 131 29.03 -1 152069..152161 + 30 42525650 - TDE0131 - hypothetical protein 132 32.16 0 152186..152356 + 56 42525651 - TDE0132 - hypothetical protein 133 37.60 0 152513..153262 + 249 42525652 - TDE0133 - GntR family transcriptional regulator 134 44.20 +1 153544..155070 + 508 42525653 - TDE0134 - oxidoreductase, FAD-dependent 135 44.57 +1 155067..156437 + 456 42525654 - TDE0135 - pyridine nucleotide-disulphide oxidoreductase family protein 136 45.66 +1 156427..156783 + 118 42525655 - TDE0136 - hypothetical protein 137 44.62 +1 156780..158339 + 519 42525656 - TDE0137 - carbohydrate kinase 138 45.20 +1 158361..160121 + 586 42525657 - TDE0138 - alkyldihydroxyacetonephosphate synthase, putative 139 37.80 0 160211..162673 - 820 42525658 - TDE0139 - hypothetical protein 140 31.66 0 162871..163947 + 358 42525659 - TDE0140 - ISTde2, transposase 141 44.76 +1 164021..164125 + 34 42525660 - TDE0141 - hypothetical protein 142 50.00 +2 164069..164164 - 31 42525661 - TDE0142 - hypothetical protein 143 41.94 0 164153..165163 + 336 42525662 - TDE0143 - thiamine ABC transporter, thiamine-binding protein 144 39.33 0 165147..166829 + 560 42525663 - TDE0144 - thiamine ABC transporter, permease protein 145 46.76 +1 166840..167472 + 210 42525664 - TDE0145 - thiamine ABC transporter, ATP-binding protein 146 40.40 0 167525..168727 - 400 42525665 - TDE0146 - amidohydrolase family protein 147 27.69 -1 168879..169073 - 64 42525666 - TDE0147 - hypothetical protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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