version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 840 41.19 0 871034..871402 + 122 42526359 - TDE0847 - hypothetical protein 841 43.33 +1 871409..871618 + 69 42526360 - TDE0848 - hypothetical protein 842 36.41 0 871739..872389 + 216 42526361 - TDE0849 - hypothetical protein 843 40.07 0 872470..874635 - 721 42526362 - TDE0850 - methyl-accepting chemotaxis protein 844 39.36 0 874839..875087 - 82 42526363 - TDE0851 - hypothetical protein 845 42.89 0 875159..875587 + 142 42526364 rplM TDE0852 - 50S ribosomal protein L13 846 44.53 +1 875613..875987 + 124 42526365 rpsI TDE0853 - 30S ribosomal protein S9 847 40.51 0 875953..876621 + 222 42526366 recX TDE0854 - recombination regulator RecX 848 37.37 0 876676..877245 + 189 42526367 - TDE0855 - DNA-binding response regulator 849 40.91 0 877251..878438 + 395 42526368 - TDE0856 - L-fuculose phosphate aldolase, putative 850 34.41 0 878453..879658 + 401 42526369 - TDE0857 - putative lipoprotein 851 34.38 0 879658..880230 + 190 42526370 - TDE0858 - hypothetical protein 852 41.75 0 880240..881166 + 308 42526371 - TDE0859 - hypothetical protein 853 41.19 0 881163..881900 + 245 42526372 rsuA TDE0860 - ribosomal small subunit pseudouridine synthase A 854 43.49 +1 881968..883188 - 406 42526373 tyrS TDE0861 - tyrosyl-tRNA synthetase 855 35.32 0 883332..884186 + 284 42526374 - TDE0862 - hypothetical protein 856 40.64 0 884666..885349 + 227 42526375 - TDE0863 - MgtC family protein 857 38.78 0 885384..887237 + 617 42526376 - TDE0864 - phosphohexose mutase family protein 858 40.97 0 887267..887659 + 130 42526377 - TDE0865 - hypothetical protein 859 34.51 0 887754..888689 + 311 42526378 - TDE0866 - hypothetical protein 860 35.98 0 888682..890460 + 592 42526379 - TDE0867 - hypothetical protein 861 41.07 0 890525..891532 + 335 42526380 - TDE0868 - oxidoreductase, FAD/FMN-binding 862 36.39 0 891610..892722 + 370 42526381 - TDE0869 - hypothetical protein 863 39.18 0 892838..894736 + 632 42526382 - TDE0870 - phosphatase/nucleotidase 864 38.30 0 894747..894887 - 46 42526383 - TDE0871 - hypothetical protein 865 46.02 +1 894981..896225 + 414 42526384 recA TDE0872 - recA protein 866 37.84 0 896283..897059 + 258 42526385 - TDE0873 - hypothetical protein 867 45.93 +1 897079..897594 + 171 42526386 - TDE0874 - transcriptional regulator, putative 868 40.85 0 897629..898333 + 234 42526387 rluB TDE0875 - ribosomal large subunit pseudouridine synthase B 869 26.88 -1 898429..898614 - 61 42526388 - TDE0876 - hypothetical protein 870 35.23 0 898729..899679 + 316 42526389 - TDE0877 - hypothetical protein 871 31.82 0 899792..899989 + 65 42526390 - TDE0878 - hypothetical protein 872 33.33 0 899986..900117 + 43 42526391 - TDE0879 - hypothetical protein 873 44.78 +1 900114..901196 + 360 42526392 cobT TDE0880 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 874 39.84 0 901307..901552 + 81 42526393 rpsP TDE0881 - ribosomal protein S16 875 44.87 +1 901589..901822 + 77 42526394 - TDE0882 - hypothetical protein 876 41.85 0 901825..902364 + 179 42526395 rimM TDE0883 - 16S rRNA processing protein RimM 877 43.58 +1 902361..903092 + 243 42526396 trmD TDE0884 - tRNA (guanine-N(1)-)-methyltransferase 878 40.83 0 903085..903444 + 119 42526397 rplS TDE0885 - 50S ribosomal protein L19 879 39.83 0 903481..904434 + 317 42526398 - TDE0886 - hypothetical protein 880 28.57 -1 904423..904842 - 139 42526399 - TDE0887 - PilT domain-containing protein 881 32.51 0 904823..905065 - 80 42526400 - TDE0888 - hypothetical protein 882 33.18 0 905230..905874 + 214 42526401 - TDE0889 - hypothetical protein 883 35.11 0 906030..907664 + 544 42526402 - TDE0890 - hypothetical protein 884 36.59 0 907732..908652 + 306 42526403 - TDE0891 - transcriptional regulator, putative 885 32.07 0 908711..909499 + 262 42526404 - TDE0892 - ABC transporter, permease protein 886 31.69 0 909480..910511 + 343 42526405 - TDE0893 - ABC transporter, ATP-binding protein 887 33.46 0 910508..911299 + 263 42526406 - TDE0894 - hypothetical protein 888 38.08 0 911317..912264 - 315 42526407 - TDE0895 - AraC family transcriptional regulator 889 38.09 0 912466..914253 + 595 42526408 - TDE0896 - ABC transporter, ATP-binding/permease protein 890 38.77 0 914253..915998 + 581 42526409 - TDE0897 - ABC transporter, ATP-binding/permease protein 891 36.50 0 916018..916617 + 199 42526410 - TDE0898 - hypothetical protein 892 37.66 0 916621..917337 + 238 42526411 - TDE0899 - ABC transporter, permease protein, putative 893 36.00 0 917328..918752 + 474 42526412 - TDE0900 - ABC transporter, ATP-binding protein 894 30.92 -1 918949..919404 - 151 42526413 - TDE0901 - hypothetical protein 895 40.50 0 919470..920222 - 250 42526414 - TDE0902 - hypothetical protein 896 42.63 0 920368..922356 + 662 42526415 pcrA TDE0903 - ATP-dependent DNA helicase PcrA 897 37.98 0 922368..922496 - 42 42526416 - TDE0904 - hypothetical protein 898 40.73 0 922572..923288 + 238 42526417 - TDE0905 - hypothetical protein 899 42.48 0 923304..924779 + 491 42526418 - TDE0906 - ABC transporter, ATP-binding protein 900 43.89 +1 924784..925380 + 198 42526419 - TDE0907 - hypothetical protein 901 45.49 +1 925394..927145 + 583 42526420 - TDE0908 - ABC transporter, ATP-binding/permease protein 902 37.06 0 927306..928913 + 535 42526421 tdeIIIM TDE0909 - type II DNA modification methyltransferase M.TdeIII 903 27.20 -1 928914..930626 + 570 42526422 - TDE0910 - hypothetical protein 904 37.71 0 930613..931389 + 258 42526423 tdeIIIR TDE0911 - type II restriction endonuclease TdeIII 905 47.47 +1 931490..931588 + 32 42526424 - TDE0912 - hypothetical protein 906 28.11 -1 931786..933144 - 452 42526425 - TDE0913 - hypothetical protein 907 34.92 0 933160..933285 - 41 42526426 - TDE0914 - hypothetical protein 908 35.63 0 933237..933410 - 57 42526427 - TDE0915 - hypothetical protein 909 43.76 +1 933499..935244 + 581 42526428 - TDE0916 - ABC transporter, ATP-binding/permease protein 910 31.43 -1 935313..935417 - 34 42526429 - TDE0917 - hypothetical protein 911 24.46 -2 935417..939043 + 1208 42526430 - TDE0918 - hypothetical protein 912 33.33 0 939087..939185 + 32 42526431 - TDE0919 - hypothetical protein 913 36.41 0 939190..940131 - 313 42526432 - TDE0920 - AraC family transcriptional regulator 914 35.63 0 940208..941947 - 579 42526433 - TDE0921 - ABC transporter, ATP-binding/permease protein 915 35.51 0 941937..943730 - 597 42526434 - TDE0922 - ABC transporter, ATP-binding/permease protein 916 48.01 +1 944010..945821 - 603 42526435 - TDE0923 - ABC transporter, ATP-binding/permease protein 917 48.41 +1 945841..947724 - 627 42526436 - TDE0924 - ABC transporter, ATP-binding/permease protein 918 41.54 0 947987..949192 + 401 42526437 pepT TDE0925 - peptidase T 919 37.75 0 949282..950097 - 271 42526438 - TDE0926 - phosphonate ABC transporter, permease protein, putative 920 34.94 0 950094..950963 - 289 42526439 - TDE0927 - phosphonate ABC transporter, permease protein, putative 921 38.65 0 950960..951730 - 256 42526440 - TDE0928 - phosphonate ABC transporter, ATP-binding protein, putative 922 43.07 +1 951809..952825 - 338 42526441 argF TDE0929 - ornithine carbamoyltransferase 923 43.14 +1 952933..953778 - 281 42526442 - TDE0930 - hypothetical protein 924 36.15 0 953851..955197 - 448 42526443 - TDE0931 - MATE efflux family protein 925 37.96 0 955224..958034 - 936 42526444 - TDE0932 - adenylate/guanylate cyclase catalytic domain-containing protein 926 42.80 0 958203..959396 + 397 42526445 ackA TDE0933 - acetate kinase 927 37.83 0 959485..959751 - 88 42526446 groES TDE0934 - co-chaperonin GroES 928 33.33 0 959751..959843 - 30 42526447 - TDE0935 - hypothetical protein 929 28.70 -1 959962..960069 - 35 42526448 - TDE0936 - hypothetical protein 930 37.98 0 960091..960951 + 286 42526449 - TDE0937 - RNA polymerase sigma-70 factor family protein 931 44.14 +1 961053..962264 - 403 42526450 - TDE0938 - hypothetical protein 932 34.51 0 962339..963274 + 311 42526451 - TDE0939 - putative lipoprotein 933 33.33 0 963276..963695 + 139 42526452 - TDE0940 - hypothetical protein 934 38.33 0 963713..964192 - 159 42526453 - TDE0941 - NLP/P60 family protein 935 41.90 0 964272..965999 + 575 42526454 - TDE0942 - long-chain-fatty-acid--CoA ligase, putative 936 39.52 0 966123..966332 + 69 42526455 - TDE0943 - hypothetical protein 937 45.71 +1 966387..967097 + 236 42526456 - TDE0944 - hypothetical protein 938 50.58 +2 967268..968380 + 370 42526457 - TDE0945 - hypothetical protein 939 44.59 +1 968352..968795 + 147 42526458 - TDE0946 - hypothetical protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.