version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 785 40.00 0 818527..819066 + 179 42526304 rplQ TDE0792 - 50S ribosomal protein L17 786 45.37 +1 819050..819265 + 71 42526305 - TDE0793 - hypothetical protein 787 37.74 0 819314..819676 - 120 42526306 - TDE0794 - hypothetical protein 788 27.13 -1 819678..820064 - 128 42526307 - TDE0795 - hypothetical protein 789 42.10 0 820197..821006 + 269 42526308 - TDE0796 - histidinol phosphate phosphatase HisJ family protein 790 44.21 +1 820999..821283 + 94 42526309 - TDE0797 - acylphosphatase 791 41.53 0 821319..822647 - 442 42526310 - TDE0798 - transporter, putative 792 34.87 0 822749..823528 + 259 42526311 - TDE0799 - glycerophosphoryl diester phosphodiesterase, putative 793 27.82 -1 823544..823978 - 144 42526312 - TDE0800 - acetyltransferase 794 33.56 0 824015..824449 - 144 42526313 - TDE0801 - hypothetical protein 795 38.21 0 824562..825197 - 211 42526314 - TDE0802 - hypothetical protein 796 36.58 0 825457..826935 + 492 42526315 - TDE0803 - hypothetical protein 797 36.26 0 826962..828089 - 375 42526316 - TDE0804 - hypothetical protein 798 29.27 -1 828311..828433 + 40 42526317 - TDE0805 - hypothetical protein 799 32.42 0 828430..828978 - 182 42526318 - TDE0806 - hypothetical protein 800 24.73 -2 829013..829198 - 61 42526319 - TDE0807 - hypothetical protein 801 33.76 0 829270..829740 - 156 42526320 - TDE0808 - acetyltransferase 802 34.29 0 829730..830875 - 381 42526321 - TDE0809 - hypothetical protein 803 32.14 0 830902..831069 - 55 42526322 - TDE0810 - hypothetical protein 804 37.72 0 831071..832438 - 455 42526323 - TDE0811 - efflux protein, putative 805 34.01 0 832584..834197 + 537 42526324 - TDE0812 - ABC transporter, ATP-binding/permease protein 806 34.72 0 834181..835767 + 528 42526325 - TDE0813 - ABC transporter, ATP-binding protein/permease 807 36.26 0 835799..835969 - 56 42526326 - TDE0814 - transcriptional regulator, putative 808 33.69 0 836067..837455 - 462 42526327 - TDE0815 - hypothetical protein 809 35.34 0 837461..838654 - 397 42526328 - TDE0816 - M20/M25/M40 family peptidase 810 33.06 0 838940..840019 + 359 42526329 - TDE0817 - histidine kinase-related ATPase, putative 811 42.39 0 840016..841737 - 573 42526330 - TDE0818 - ABC transporter, ATP-binding/permease protein 812 40.18 0 841739..843475 - 578 42526331 - TDE0819 - ABC transporter, ATP-binding/permease protein 813 40.45 0 843804..844463 - 219 42526332 - TDE0820 - TetR family transcriptional regulator 814 34.41 0 844518..844610 + 30 42526333 - TDE0821 - hypothetical protein 815 28.46 -1 844607..844729 + 40 42526334 - TDE0822 - hypothetical protein 816 44.68 +1 844881..845312 + 143 42526335 - TDE0823 - (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase, putative 817 40.40 0 845316..845966 - 216 42526336 - TDE0824 - putative lipoprotein 818 41.59 0 846102..847700 + 532 42526337 - TDE0825 - UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase, putative 819 37.85 0 847744..847920 + 58 42526338 - TDE0826 - hypothetical protein 820 41.81 0 847967..848143 - 58 42526339 - TDE0827 - hypothetical protein 821 47.01 +1 848373..850259 - 628 42526340 gidA TDE0828 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 822 42.85 0 850275..851567 - 430 42526341 - TDE0829 - putative aminopeptidase 2 823 30.22 -1 851699..852115 - 138 42526342 - TDE0830 - hypothetical protein 824 34.83 0 852185..852385 - 66 42526343 - TDE0831 - hypothetical protein 825 45.19 +1 852689..853135 + 148 42526344 - TDE0832 - hypothetical protein 826 47.95 +1 853132..854157 + 341 42526345 - TDE0833 - putative lipoprotein 827 42.41 0 854381..854953 - 190 42526346 nqrE TDE0834 - Na(+)-translocating NADH-quinone reductase, E subunit 828 39.85 0 854957..855616 - 219 42526347 nqrD TDE0835 - SoxR-reducing system protein RsxE 829 43.51 +1 855617..856186 - 189 42526348 nqrC TDE0836 - Na(+)-translocating NADH-quinone reductase, C subunit 830 41.99 0 856183..857199 - 338 42526349 nqrB TDE0837 - Na(+)-translocating NADH-quinone reductase, B subunit 831 44.21 +1 857199..858641 - 480 42526350 nqrA TDE0838 - Na(+)-translocating NADH-quinone reductase, A subunit 832 32.20 0 858724..859431 - 235 42526351 - TDE0839 - rhodanese-like domain-containing protein 833 31.84 0 859509..860984 - 491 42526352 - TDE0840 - hypothetical protein 834 33.79 0 861026..861688 - 220 42526353 - TDE0841 - hypothetical protein 835 42.31 0 861855..863903 + 682 42526354 cfpA TDE0842 - cytoplasmic filament protein A 836 38.79 0 863990..865015 + 341 42526355 - TDE0843 - hypothetical protein 837 41.56 0 865026..867833 + 935 42526356 - TDE0844 - pyruvate phosphate dikinase 838 40.59 0 867935..868609 + 224 42526357 - TDE0845 - hypothetical protein 839 37.68 0 868763..870925 + 720 42526358 - TDE0846 - hypothetical protein 840 41.19 0 871034..871402 + 122 42526359 - TDE0847 - hypothetical protein 841 43.33 +1 871409..871618 + 69 42526360 - TDE0848 - hypothetical protein 842 36.41 0 871739..872389 + 216 42526361 - TDE0849 - hypothetical protein 843 40.07 0 872470..874635 - 721 42526362 - TDE0850 - methyl-accepting chemotaxis protein 844 39.36 0 874839..875087 - 82 42526363 - TDE0851 - hypothetical protein 845 42.89 0 875159..875587 + 142 42526364 rplM TDE0852 - 50S ribosomal protein L13 846 44.53 +1 875613..875987 + 124 42526365 rpsI TDE0853 - 30S ribosomal protein S9 847 40.51 0 875953..876621 + 222 42526366 recX TDE0854 - recombination regulator RecX 848 37.37 0 876676..877245 + 189 42526367 - TDE0855 - DNA-binding response regulator 849 40.91 0 877251..878438 + 395 42526368 - TDE0856 - L-fuculose phosphate aldolase, putative 850 34.41 0 878453..879658 + 401 42526369 - TDE0857 - putative lipoprotein 851 34.38 0 879658..880230 + 190 42526370 - TDE0858 - hypothetical protein 852 41.75 0 880240..881166 + 308 42526371 - TDE0859 - hypothetical protein 853 41.19 0 881163..881900 + 245 42526372 rsuA TDE0860 - ribosomal small subunit pseudouridine synthase A 854 43.49 +1 881968..883188 - 406 42526373 tyrS TDE0861 - tyrosyl-tRNA synthetase 855 35.32 0 883332..884186 + 284 42526374 - TDE0862 - hypothetical protein 856 40.64 0 884666..885349 + 227 42526375 - TDE0863 - MgtC family protein 857 38.78 0 885384..887237 + 617 42526376 - TDE0864 - phosphohexose mutase family protein 858 40.97 0 887267..887659 + 130 42526377 - TDE0865 - hypothetical protein 859 34.51 0 887754..888689 + 311 42526378 - TDE0866 - hypothetical protein 860 35.98 0 888682..890460 + 592 42526379 - TDE0867 - hypothetical protein 861 41.07 0 890525..891532 + 335 42526380 - TDE0868 - oxidoreductase, FAD/FMN-binding 862 36.39 0 891610..892722 + 370 42526381 - TDE0869 - hypothetical protein 863 39.18 0 892838..894736 + 632 42526382 - TDE0870 - phosphatase/nucleotidase 864 38.30 0 894747..894887 - 46 42526383 - TDE0871 - hypothetical protein 865 46.02 +1 894981..896225 + 414 42526384 recA TDE0872 - recA protein 866 37.84 0 896283..897059 + 258 42526385 - TDE0873 - hypothetical protein 867 45.93 +1 897079..897594 + 171 42526386 - TDE0874 - transcriptional regulator, putative 868 40.85 0 897629..898333 + 234 42526387 rluB TDE0875 - ribosomal large subunit pseudouridine synthase B 869 26.88 -1 898429..898614 - 61 42526388 - TDE0876 - hypothetical protein 870 35.23 0 898729..899679 + 316 42526389 - TDE0877 - hypothetical protein 871 31.82 0 899792..899989 + 65 42526390 - TDE0878 - hypothetical protein 872 33.33 0 899986..900117 + 43 42526391 - TDE0879 - hypothetical protein 873 44.78 +1 900114..901196 + 360 42526392 cobT TDE0880 - nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase 874 39.84 0 901307..901552 + 81 42526393 rpsP TDE0881 - ribosomal protein S16 875 44.87 +1 901589..901822 + 77 42526394 - TDE0882 - hypothetical protein 876 41.85 0 901825..902364 + 179 42526395 rimM TDE0883 - 16S rRNA processing protein RimM 877 43.58 +1 902361..903092 + 243 42526396 trmD TDE0884 - tRNA (guanine-N(1)-)-methyltransferase 878 40.83 0 903085..903444 + 119 42526397 rplS TDE0885 - 50S ribosomal protein L19 879 39.83 0 903481..904434 + 317 42526398 - TDE0886 - hypothetical protein 880 28.57 -1 904423..904842 - 139 42526399 - TDE0887 - PilT domain-containing protein 881 32.51 0 904823..905065 - 80 42526400 - TDE0888 - hypothetical protein 882 33.18 0 905230..905874 + 214 42526401 - TDE0889 - hypothetical protein 883 35.11 0 906030..907664 + 544 42526402 - TDE0890 - hypothetical protein 884 36.59 0 907732..908652 + 306 42526403 - TDE0891 - transcriptional regulator, putative 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.