version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 7 33.68 0 10014..10868 + 284 42525526 - TDE0007 - hypothetical protein 8 43.24 +1 11031..13706 + 891 42525527 - TDE0008 - copper-translocating P-type ATPase 9 39.17 0 13814..14635 - 273 42525528 - TDE0009 - hypothetical protein 10 39.68 0 14720..15286 + 188 42525529 - TDE0010 - MutT/nudix family protein 11 42.90 0 15548..16195 + 215 42525530 - TDE0011 - peroxiredoxin 12 40.55 0 16308..17762 + 484 42525531 - TDE0012 - carbon starvation protein CstA, putative 13 43.31 +1 17848..18729 - 293 42525532 folD TDE0013 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 14 40.29 0 18930..19547 + 205 42525533 - TDE0014 - hypothetical protein 15 38.34 0 19567..20604 + 345 42525534 - TDE0015 - putative lipoprotein 16 45.02 +1 20597..21922 + 441 42525535 - TDE0016 - recombination factor protein RarA 17 41.79 0 21998..23026 - 342 42525536 - TDE0017 - hypothetical protein 18 42.71 0 23163..23663 - 166 42525537 - TDE0018 - LysM domain-containing protein 19 42.64 0 23755..25419 - 554 42525538 fhs TDE0019 - formate--tetrahydrofolate ligase 20 39.23 0 25586..26941 + 451 42525539 glyS TDE0020 - glycyl-tRNA synthetase 21 33.63 0 26954..27955 + 333 42525540 - TDE0021 - CDP-alcohol phosphatidyltransferase family protein 22 35.26 0 28012..28581 + 189 42525541 - TDE0022 - hypothetical protein 23 33.33 0 28613..29509 - 298 42525542 - TDE0023 - acetyltransferase 24 41.82 0 29509..31182 - 557 42525543 - TDE0024 - glycosy hydrolase family protein 25 36.17 0 31191..31649 - 152 42525544 - TDE0025 - hypothetical protein 26 40.72 0 31916..33106 - 396 42525545 - TDE0026 - TraB family protein 27 37.50 0 33093..34076 - 327 42525546 - TDE0027 - DHH superfamily protein, subfamily 1 28 33.17 0 34146..36020 - 624 42525547 - TDE0028 - ABC transporter ATP-binding protein 29 34.51 0 36034..37812 - 592 42525548 - TDE0029 - ABC transporter ATP-binding protein 30 29.36 -1 38018..38797 - 259 42525549 - TDE0030 - prolipoprotein diacylglyceryl transferase, putative 31 44.06 +1 38925..39185 - 86 42525550 - TDE0031 - hypothetical protein 32 36.01 0 39321..40067 - 248 42525551 - TDE0032 - histidine kinase-related ATPase, putative 33 34.86 0 40067..40786 - 239 42525552 - TDE0033 - DNA-binding response regulator 34 26.02 -1 40803..41540 - 245 42525553 - TDE0034 - hypothetical protein 35 41.27 0 41670..42110 - 146 42525554 - TDE0035 - acetyltransferase 36 28.50 -1 42225..42617 - 130 42525555 - TDE0036 - hypothetical protein 37 34.54 0 42641..42889 - 82 42525556 - TDE0037 - AbrB family transcriptional regulator 38 47.65 +1 43126..44361 - 411 42525557 fabF TDE0038 - 3-oxoacyl-(acyl-carrier-protein) synthase II 39 34.85 0 44579..45763 - 394 42525558 - TDE0039 - ISTde1, transposase 40 43.80 +1 45866..47518 - 550 42525559 - TDE0040 - AMP-binding protein 41 44.00 +1 47637..48695 + 352 42525560 birA TDE0041 - birA bifunctional protein 42 47.72 +1 48816..49823 + 335 42525561 pta TDE0042 - phosphate acetyltransferase 43 42.83 0 49828..51711 + 627 42525562 - TDE0043 - TPR domain-containing protein 44 38.02 0 51750..53222 - 490 42525563 - TDE0044 - ABC transporter, ATP-binding protein 45 35.56 0 53359..55203 - 614 42525564 - TDE0045 - ABC transporter, ATP-binding protein 46 46.26 +1 55298..55939 - 213 42525565 - TDE0046 - formiminotransferase-cyclodeaminase family protein 47 44.69 +1 56010..57251 - 413 42525566 hutI TDE0047 - imidazolonepropionase 48 30.82 -1 57277..57912 - 211 42525567 - TDE0048 - hypothetical protein 49 36.48 0 58289..59179 - 296 42525568 - TDE0049 - hypothetical protein 50 41.32 0 59373..60161 - 262 42525569 - TDE0050 - RNA methyltransferase 51 40.19 0 60163..61314 - 383 42525570 - TDE0051 - alcohol dehydrogenase, iron-containing 52 36.30 0 61445..61714 + 89 42525571 fliQ TDE0052 - flagellar biosynthetic protein FliQ 53 39.25 0 61733..62527 + 264 42525572 fliR TDE0053 - flagellar biosynthetic protein FliR 54 39.13 0 62524..63696 + 390 42525573 flhB TDE0054 - flagellar biosynthesis protein FlhB 55 42.35 0 63705..65801 + 698 42525574 flhA TDE0055 - flagellar biosynthesis protein FlhA 56 40.10 0 65846..66052 + 68 42525575 - TDE0056 - DNA-directed RNA polymerase, omega subunit, putative 57 42.25 0 66075..67061 + 328 42525576 miaA-1 TDE0057 - tRNA delta(2)-isopentenylpyrophosphate transferase 58 43.54 +1 67126..67458 + 110 42525577 - TDE0058 - hypothetical protein 59 39.81 0 67434..67541 + 35 42525578 - TDE0059 - hypothetical protein 60 35.26 0 67617..67928 - 103 42525579 - TDE0060 - hypothetical protein 61 37.92 0 67988..69034 - 348 42525580 - TDE0061 - fic family protein 62 39.84 0 69230..69721 + 163 42525581 - TDE0062 - PTS system, IIA component 63 36.46 0 69854..71389 + 511 42525582 - TDE0063 - hypothetical protein 64 42.29 0 71425..72741 - 438 42525583 pfk TDE0064 - diphosphate--fructose-6-phosphate 1-phosphotransferase 65 33.71 0 72912..73436 - 174 42525584 - TDE0065 - hypothetical protein 66 34.69 0 73426..74016 - 196 42525585 - TDE0066 - hypothetical protein 67 40.54 0 74031..75278 - 415 42525586 - TDE0067 - cyclic nucleotide-binding protein 68 42.23 0 75437..76672 + 411 42525587 - TDE0068 - succinyl-diaminopimelate desuccinylase 69 42.48 0 76691..77707 + 338 42525588 - TDE0069 - hypothetical protein 70 34.90 0 77853..78680 + 275 42525589 - TDE0070 - sigma-70 family RNA polymerase sigma factor 71 42.08 0 78742..80982 + 746 42525590 - TDE0071 - U32 family peptidase 72 35.34 0 81061..83199 + 712 42525591 - TDE0072 - methyl-accepting chemotaxis protein 73 35.71 0 83249..84172 - 307 42525592 - TDE0073 - riboflavin biosynthesis protein RibF, putative 74 36.53 0 84246..85589 - 447 42525593 - TDE0074 - amino acid permease family protein 75 41.83 0 85617..86663 - 348 42525594 - TDE0075 - sorbitol dehydrogenase, putative 76 42.36 0 86679..87476 - 265 42525595 - TDE0076 - aldolase 77 37.99 0 87512..88822 - 436 42525596 grdE-1 TDE0077 - glycine reductase complex proprotein GrdE1 78 40.84 0 88835..90166 - 443 42525597 grdB-1 TDE0078 - glycine reductase complex selenoprotein GrdB1 79 35.42 0 90185..90760 - 191 42525598 - TDE0079 - DNA-binding protein 80 39.60 0 90818..92302 - 494 42525599 gbsA TDE0080 - betaine aldehyde dehydrogenase 81 36.21 0 92643..94031 - 462 42525600 - TDE0081 - hypothetical protein 82 37.74 0 94024..94341 - 105 42525601 - TDE0082 - MerR family transcriptional regulator 83 40.32 0 94344..95774 - 476 42525602 engA TDE0083 - GTP-binding protein EngA 84 39.78 0 95761..97545 - 594 42525603 ptsI TDE0084 - phosphoenolpyruvate-protein phosphotransferase 85 33.27 0 97686..101105 - 1139 42525604 - TDE0085 - ATP-dependent DNA helicase UvrD 86 32.45 0 101129..103966 - 945 42525605 - TDE0086 - hypothetical protein 87 39.26 0 104079..105479 + 466 42525606 trkA TDE0087 - potassium transporter peripheral membrane component 88 42.76 0 105487..106929 + 480 42525607 trkH TDE0088 - Trk system potassium uptake protein TrkH 89 37.98 0 106965..108644 - 559 42525608 - TDE0089 - transglutaminase-like domain-containing protein 90 34.84 0 108634..109296 - 220 42525609 - TDE0090 - hypothetical protein 91 38.31 0 109280..109822 - 180 42525610 - TDE0091 - RNA polymerase sigma-24 factor, putative 92 39.15 0 109867..111345 - 492 42525611 cysS TDE0092 - cysteinyl-tRNA synthetase 93 39.20 0 111397..112368 + 323 42525612 - TDE0093 - UDP-N-acetylenolpyruvoylglucosamine reductase, putative 94 24.00 -2 112359..112508 + 49 42525613 - TDE0094 - hypothetical protein 95 34.03 0 112539..112682 + 47 42525614 - TDE0095 - hypothetical protein 96 40.00 0 112863..114197 + 444 42525615 - TDE0096 - NADH oxidase 97 28.57 -1 114337..114861 + 174 42525616 - TDE0097 - hypothetical protein 98 34.44 0 114932..115651 - 239 42525617 - TDE0098 - hypothetical protein 99 35.35 0 115788..117074 + 428 42525618 - TDE0099 - adenine-specific DNA modification methyltransferase 100 41.30 0 117064..119034 - 656 42525619 - TDE0100 - hypothetical protein 101 38.00 0 119107..121251 - 714 42525620 - TDE0101 - alpha-amylase family protein 102 35.73 0 121315..122607 + 430 42525621 - TDE0102 - cyclic nucleotide-binding protein 103 40.33 0 122634..123776 - 380 42525622 - TDE0103 - aminotransferase, class-V 104 39.63 0 123773..124804 - 343 42525623 - TDE0104 - 3-dehydroquinate synthase 105 39.70 0 124822..125544 - 240 42525624 - TDE0105 - MTA/SAH nucleosidase 106 39.50 0 125632..126636 - 334 42525625 - TDE0106 - hypothetical protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.