version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 338 42.24 0 379679..382216 - 845 42525857 nrdA TDE0341 - ribonucleotide-diphosphate reductase subunit alpha 339 37.86 0 382218..383831 - 537 42525858 mviN TDE0342 - integral membrane protein MviN 340 37.18 0 384337..385455 - 372 42525859 - TDE0343 - alpha/beta fold family hydrolase 341 38.74 0 385457..385678 - 73 42525860 - TDE0344 - AbrB family transcriptional regulator 342 41.20 0 385834..387066 - 410 42525861 dmcB TDE0345 - methyl-accepting chemotaxis protein DmcB 343 40.48 0 387163..387987 - 274 42525862 prtB TDE0346 - protease PrtB 344 40.96 0 388140..390329 - 729 42525863 dmcA TDE0347 - methyl-accepting chemotaxis protein DmcA 345 34.67 0 390597..391193 + 198 42525864 - TDE0348 - TetR family transcriptional regulator 346 38.58 0 391233..393710 + 825 42525865 - TDE0349 - phosphoenolpyruvate synthase, putative 347 40.64 0 393712..395079 + 455 42525866 - TDE0350 - MATE efflux family protein 348 50.53 +2 395141..396088 - 315 42525867 ldh TDE0351 - L-lactate dehydrogenase 349 50.77 +2 396347..396799 + 150 42525868 rpiB TDE0352 - ribose 5-phosphate isomerase B 350 44.80 +1 396833..398428 - 531 42525869 - TDE0353 - GDSL family lipase/acylhydrolase 351 49.73 +2 398507..399061 + 184 42525870 - TDE0354 - general stress protein 14 352 43.98 +1 399145..399717 + 190 42525871 - TDE0355 - hypothetical protein 353 41.18 0 399822..400178 - 118 42525872 - TDE0356 - hypothetical protein 354 33.49 0 400198..400833 - 211 42525873 - TDE0357 - hypothetical protein 355 45.04 +1 400883..401728 - 281 42525874 cinI TDE0358 - cinnamoyl ester hydrolase 356 46.70 +1 402283..404190 - 635 42525875 - TDE0359 - ABC transporter, ATP-binding/permease protein 357 43.26 +1 404192..405934 - 580 42525876 - TDE0360 - ABC transporter, ATP-binding/permease protein 358 42.07 0 406129..407502 + 457 42525877 - TDE0361 - transporter, putative 359 39.15 0 407591..409534 - 647 42525878 - TDE0362 - Ig-like domain-containing protein 360 26.80 -1 409626..410069 - 147 42525879 - TDE0363 - hypothetical protein 361 29.29 -1 410139..411695 - 518 42525880 - TDE0364 - ABC transporter, ATP-binding protein 362 33.05 0 411813..412511 - 232 42525881 - TDE0365 - hypothetical protein 363 34.13 0 412512..415631 - 1039 42525882 hsdR-1 TDE0366 - type I restriction-modification system, R subunit 364 39.02 0 415624..416643 - 339 42525883 - TDE0367 - hypothetical protein 365 32.92 0 416647..418335 - 562 42525884 - TDE0368 - type I restriction-modification system, S subunit, putative 366 35.63 0 418446..421061 - 871 42525885 hsdM-1 TDE0369 - type I restriction-modification system, M subunit 367 37.60 0 421224..422654 + 476 42525886 murD TDE0370 - UDP-N-acetylmuramoylalanine--D-glutamate ligase 368 29.38 -1 422827..424674 + 615 42525887 - TDE0371 - hypothetical protein 369 29.39 -1 424722..426266 - 514 42525888 - TDE0372 - ABC transporter, ATP-binding/permease protein 370 29.83 -1 426241..427812 - 523 42525889 - TDE0373 - ABC transporter, ATP-binding/permease protein 371 35.98 0 428004..429290 - 428 42525890 - TDE0374 - glycosyl transferase, group 1 family protein 372 31.86 0 429287..430237 - 316 42525891 - TDE0375 - ABC transporter, ATP-binding protein 373 32.84 0 430260..431879 - 539 42525892 - TDE0376 - ABC transporter, permease protein, putative 374 26.88 -1 431975..432067 - 30 42525893 - TDE0377 - hypothetical protein 375 37.73 0 432304..432576 + 90 42525894 - TDE0378 - hypothetical protein 376 33.81 0 432598..433437 + 279 42525895 - TDE0379 - hypothetical protein 377 31.70 0 433491..434042 + 183 42525896 - TDE0380 - hypothetical protein 378 31.56 0 434072..434521 + 149 42525897 - TDE0381 - hypothetical protein 379 28.64 -1 434533..434745 + 70 42525898 - TDE0382 - hypothetical protein 380 27.81 -1 434749..435219 + 156 42525899 - TDE0383 - hypothetical protein 381 28.67 -1 435188..435745 + 185 42525900 - TDE0384 - hypothetical protein 382 25.49 -2 435779..437347 + 522 42525901 - TDE0385 - ABC transporter, ATP-binding/permease protein 383 41.99 0 437395..438411 - 338 42525902 - TDE0386 - ABC transporter, periplasmic substrate-binding protein 384 42.67 0 438567..439316 + 249 42525903 hgdC TDE0387 - (R)-hydroxyglutaryl-CoA dehydratase activator 385 31.08 -1 439313..440110 + 265 42525904 - TDE0388 - hypothetical protein 386 39.63 0 440148..441386 + 412 42525905 - TDE0389 - (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative 387 32.56 0 441386..441643 + 85 42525906 - TDE0390 - hypothetical protein 388 36.55 0 441691..441939 - 82 42525907 - TDE0391 - hypothetical protein 389 40.29 0 441936..443114 - 392 42525908 - TDE0392 - (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit, putative 390 30.25 -1 443272..443919 - 215 42525909 - TDE0393 - TetR family transcriptional regulator 391 32.71 0 444121..445083 + 320 42525910 - TDE0394 - oligopeptide/dipeptide ABC transporter, permease protein 392 38.13 0 445095..445949 + 284 42525911 - TDE0395 - oligopeptide/dipeptide ABC transporter, permease protein 393 37.46 0 445952..446920 + 322 42525912 - TDE0396 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 394 34.46 0 446917..447894 + 325 42525913 - TDE0397 - oligopeptide/dipeptide ABC transporter, ATP-binding protein 395 37.44 0 447913..449496 + 527 42525914 - TDE0398 - oligopeptide/dipeptide ABC transporter, periplasmic peptide-binding protein 396 38.42 0 449568..450905 + 445 42525915 - TDE0399 - zinc carboxypeptidase family protein 397 37.02 0 450973..451893 - 306 42525916 - TDE0400 - LysR family transcriptional regulator 398 35.71 0 451927..454320 - 797 42525917 - TDE0401 - adenylate/guanylate cyclase catalytic domain-containing protein 399 49.52 +2 454338..454442 - 34 42525918 - TDE0402 - hypothetical protein 400 34.97 0 454573..455427 + 284 42525919 - TDE0403 - hypothetical protein 401 25.53 -2 455449..455589 - 46 42525920 - TDE0404 - hypothetical protein 402 42.03 0 455610..457241 + 543 42525921 - TDE0405 - major outer sheath protein 403 37.47 0 457370..458989 + 539 42525922 - TDE0406 - hypothetical protein 404 46.69 +1 459101..460612 - 503 42525923 gltA TDE0407 - putative oxidoreductase 405 45.04 +1 460626..461462 - 278 42525924 - TDE0408 - ferredoxin--NADP(+) reductase subunit alpha 406 37.74 0 461717..462193 + 158 42525925 - TDE0409 - hypothetical protein 407 41.52 0 462193..463059 + 288 42525926 - TDE0410 - M48 family peptidase 408 41.68 0 463071..465155 + 694 42525927 - TDE0411 - adenylate/guanylate cyclase catalytic domain-containing protein 409 31.61 0 465076..466467 + 463 42525928 - TDE0412 - hypothetical protein 410 29.34 -1 466478..467428 + 316 42525929 - TDE0413 - putative lipoprotein 411 32.67 0 467400..467702 + 100 42525930 - TDE0414 - hypothetical protein 412 30.97 -1 467807..469075 + 422 42525931 - TDE0415 - putative lipoprotein 413 34.33 0 469079..469582 + 167 42525932 - TDE0416 - bacteriocin-type signal sequence domain-containing protein 414 35.83 0 469579..469698 - 39 42525933 - TDE0417 - hypothetical protein 415 31.60 0 469742..470953 + 403 42525934 - TDE0418 - putative lipoprotein 416 28.89 -1 471063..472346 + 427 42525935 - TDE0419 - hypothetical protein 417 31.90 0 472358..473545 + 395 42525936 - TDE0420 - hypothetical protein 418 31.08 -1 473556..474842 + 428 42525937 - TDE0421 - putative lipoprotein 419 35.34 0 474826..476670 + 614 42525938 - TDE0422 - bacteriocin-type signal sequence domain-containing protein 420 31.28 -1 476741..478006 + 421 42525939 - TDE0423 - hypothetical protein 421 36.35 0 478010..479833 + 607 42525940 - TDE0424 - bacteriocin-type signal sequence domain-containing protein 422 35.36 0 479840..482005 + 721 42525941 - TDE0425 - bacteriocin ABC transporter, ATP-binding/permease, putative 423 31.08 -1 482021..483172 + 383 42525942 - TDE0426 - bacteriocin ABC transporter, bacteriocin-binding protein, putative 424 28.38 -1 483166..484539 + 457 42525943 - TDE0427 - hypothetical protein 425 28.61 -1 484543..485283 - 246 42525944 - TDE0428 - TPR domain-containing protein 426 34.25 0 485295..485513 - 72 42525945 - TDE0429 - hypothetical protein 427 30.29 -1 485529..486545 - 338 42525946 - TDE0430 - TPR domain-containing protein 428 35.56 0 486560..487684 - 374 42525947 - TDE0431 - LysM domain-containing protein 429 32.49 0 487810..488283 - 157 42525948 - TDE0432 - TPR domain-containing protein 430 32.12 0 488643..488807 - 54 42525949 - TDE0433 - hypothetical protein 431 44.62 +1 489049..489624 + 191 42525950 - TDE0434 - rubrerythrin 432 44.13 +1 489648..491351 - 567 42525951 - TDE0435 - ATP-dependent DNA helicase RecQ 433 43.21 +1 491414..492223 - 269 42525952 recO TDE0436 - recombination protein O 434 39.46 0 492226..493695 - 489 42525953 - TDE0437 - HEAT repeat-containing PBS lyase 435 40.70 0 493762..494901 - 379 42525954 tgt TDE0438 - queuine tRNA-ribosyltransferase 436 35.14 0 495194..495913 - 239 42525955 - TDE0439 - hypothetical protein 437 34.78 0 496091..496366 + 91 42525956 - TDE0440 - DNA-binding protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0