version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2540 40.64 0 2585474..2587294 - 606 42528059 - TDE2559 - ABC transporter, ATP-binding/permease protein 2541 32.04 0 2587451..2588299 + 282 42528060 - TDE2560 - hypothetical protein 2542 33.19 0 2588354..2589037 + 227 42528061 - TDE2561 - ABC transporter, ATP-binding protein 2543 40.62 0 2589039..2589848 + 269 42528062 - TDE2562 - cation ABC transporter, permease protein, putative 2544 33.85 0 2589934..2590128 + 64 42528063 - TDE2563 - hypothetical protein 2545 34.22 0 2590115..2590453 + 112 42528064 - TDE2564 - PemK family protein 2546 39.00 0 2590482..2591363 - 293 42528065 - TDE2565 - hypothetical protein 2547 41.70 0 2591422..2594277 - 951 42528066 - TDE2566 - hypothetical protein 2548 39.82 0 2594288..2595166 - 292 42528067 - TDE2567 - hypothetical protein 2549 43.73 +1 2595282..2596445 + 387 42528068 thiI TDE2568 - thiamine biosynthesis protein ThiI 2550 42.95 0 2596448..2597518 + 356 42528069 aroF TDE2569 - phospho-2-dehydro-3-deoxyheptonate aldolase 2551 44.72 +1 2597515..2597997 + 160 42528070 rnhA TDE2570 - ribonuclease HI 2552 44.16 +1 2598012..2598242 - 76 42528071 - TDE2571 - hypothetical protein 2553 37.71 0 2598235..2598828 - 197 42528072 pgsA TDE2572 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2554 42.65 0 2598942..2600519 + 525 42528073 pgi TDE2573 - glucose-6-phosphate isomerase 2555 41.16 0 2600516..2601154 + 212 42528074 - TDE2574 - hypothetical protein 2556 38.70 0 2601158..2601772 + 204 42528075 - TDE2575 - hypothetical protein 2557 41.63 0 2601812..2602546 + 244 42528076 - TDE2576 - RNA pseudouridylate synthase family protein 2558 30.68 -1 2602580..2602993 - 137 42528077 - TDE2577 - hypothetical protein 2559 32.94 0 2602990..2603244 - 84 42528078 - TDE2578 - hypothetical protein 2560 45.95 +1 2603378..2605414 - 678 42528079 recG TDE2579 - ATP-dependent DNA helicase RecG 2561 29.69 -1 2605586..2610910 + 1774 42528080 - TDE2580 - GGDEF domain-containing protein 2562 24.64 -2 2610922..2611692 + 256 42528081 - TDE2581 - hypothetical protein 2563 29.21 -1 2611929..2616224 + 1431 42528082 - TDE2582 - GGDEF domain-containing protein 2564 18.18 -2 2616462..2616560 + 32 42528083 - TDE2583 - hypothetical protein 2565 39.53 0 2616553..2618004 + 483 42528084 - TDE2584 - dipeptidase 2566 35.27 0 2618066..2620393 - 775 42528085 - TDE2585 - methyl-accepting chemotaxis domain/unknown domain-containing protein 2567 43.07 +1 2620341..2622179 - 612 42528086 - TDE2586 - DNA polymerase III subunits gamma and tau 2568 40.10 0 2622331..2623350 + 339 42528087 - TDE2587 - endonuclease/exonuclease/phosphatase family protein 2569 39.07 0 2623636..2624838 + 400 42528088 - TDE2588 - integrase domain-containing protein 2570 39.30 0 2625090..2626496 - 468 42528089 - TDE2589 - putative aminopeptidase 1 2571 23.68 -2 2626622..2626735 + 37 42528090 - TDE2590 - hypothetical protein 2572 37.78 0 2626710..2627069 + 119 42528091 - TDE2591 - rhodanese-like domain-containing protein 2573 37.48 0 2627166..2627792 + 208 42528092 - TDE2592 - DbpA RNA-binding domain-containing protein 2574 37.73 0 2627887..2629023 + 378 42528093 - TDE2593 - sigma-54-binding protein 2575 36.51 0 2629020..2630120 - 366 42528094 - TDE2594 - hypothetical protein 2576 33.43 0 2630124..2631170 - 348 42528095 - TDE2595 - hypothetical protein 2577 38.32 0 2631167..2632129 - 320 42528096 - TDE2596 - hypothetical protein 2578 42.38 0 2632126..2632755 - 209 42528097 rpe TDE2597 - ribulose-phosphate 3-epimerase 2579 36.44 0 2632809..2633420 - 203 42528098 - TDE2598 - hypothetical protein 2580 40.32 0 2633424..2634053 - 209 42528099 tmk TDE2599 - thymidylate kinase 2581 34.48 0 2634098..2638615 + 1505 42528100 - TDE2600 - hypothetical protein 2582 35.08 0 2638630..2641086 + 818 42528101 - TDE2601 - surface antigen, putative 2583 37.31 0 2641096..2641623 + 175 42528102 - TDE2602 - outer membrane protein, putative 2584 43.31 +1 2641616..2644291 + 891 42528103 mutS TDE2603 - DNA mismatch repair protein 2585 27.27 -1 2644314..2645864 - 516 42528104 - TDE2604 - hypothetical protein 2586 37.02 0 2645958..2646500 + 180 42528105 - TDE2605 - phosphoglycerate mutase family protein 2587 47.06 +1 2646587..2648611 + 674 42528106 hutU TDE2606 - urocanate hydratase 2588 38.12 0 2648726..2649394 + 222 42528107 - TDE2607 - hypothetical protein 2589 38.61 0 2649415..2650533 + 372 42528108 - TDE2608 - hypothetical protein 2590 40.17 0 2650561..2651964 + 467 42528109 - TDE2609 - putative tRNA modifying protein 2591 33.33 0 2651944..2652060 - 38 42528110 - TDE2610 - hypothetical protein 2592 38.69 0 2652120..2654339 + 739 42528111 - TDE2611 - hypothetical protein 2593 35.81 0 2654347..2655519 + 390 42528112 - TDE2612 - hypothetical protein 2594 35.56 0 2655512..2655916 + 134 42528113 - TDE2613 - hypothetical protein 2595 37.46 0 2656108..2657223 - 371 42528114 - TDE2614 - ApbE family protein 2596 37.93 0 2657236..2657757 - 173 42528115 lspA TDE2615 - signal peptidase II 2597 40.00 0 2657770..2658429 - 219 42528116 - TDE2616 - cyclic nucleotide-binding protein 2598 41.82 0 2658433..2659434 - 333 42528117 - TDE2617 - cyclic nucleotide-binding protein 2599 45.21 +1 2659532..2660407 + 291 42528118 - TDE2618 - phosphotransferase domain-containing protein 2600 38.11 0 2660420..2661634 + 404 42528119 - TDE2619 - RNA methyltransferase 2601 35.48 0 2661678..2662097 + 139 42528120 - TDE2620 - hypothetical protein 2602 36.05 0 2662111..2662257 + 48 42528121 - TDE2621 - hypothetical protein 2603 48.27 +1 2662268..2663680 - 470 42528122 - TDE2622 - ABC transporter, ATP-binding protein 2604 48.72 +1 2663674..2664414 - 246 42528123 - TDE2623 - hypothetical protein 2605 43.76 +1 2664411..2664995 - 194 42528124 - TDE2624 - hypothetical protein 2606 48.97 +2 2665015..2666754 - 579 42528125 - TDE2625 - ABC transporter, ATP-binding/permease protein 2607 48.34 +1 2666747..2668492 - 581 42528126 - TDE2626 - ABC transporter, ATP-binding/permease protein 2608 44.99 +1 2668622..2669230 - 202 42528127 - TDE2627 - TetR family transcriptional regulator 2609 41.03 0 2669208..2669402 + 64 42528128 - TDE2628 - hypothetical protein 2610 47.23 +1 2669469..2671022 + 517 42528129 - TDE2629 - peptide ABC transporter, periplasmic peptide-binding protein, putative 2611 44.34 +1 2671019..2671972 + 317 42528130 - TDE2630 - peptide ABC transporter, permease protein, putative 2612 48.12 +1 2671969..2672793 + 274 42528131 - TDE2631 - peptide ABC transporter, permease protein, putative 2613 49.32 +2 2672790..2674484 + 564 42528132 - TDE2632 - peptide ABC transporter, ATP-binding protein, putative 2614 37.12 0 2674499..2674762 + 87 42528133 - TDE2633 - hypothetical protein 2615 40.89 0 2674765..2675571 + 268 42528134 - TDE2634 - hypothetical protein 2616 34.33 0 2675593..2676093 + 166 42528135 - TDE2635 - acetyltransferase 2617 44.50 +1 2676210..2676809 + 199 42528136 - TDE2636 - hypothetical protein 2618 43.05 +1 2676882..2677406 - 174 42528137 - TDE2637 - hypothetical protein 2619 36.84 0 2677633..2678259 + 208 42528138 - TDE2638 - hypothetical protein 2620 42.49 0 2678260..2680149 + 629 42528139 pepF TDE2639 - oligoendopeptidase F 2621 42.59 0 2680174..2681091 + 305 42528140 - TDE2640 - hypothetical protein 2622 34.35 0 2681142..2682128 + 328 42528141 - TDE2641 - Fic family protein 2623 28.47 -1 2682201..2682344 - 47 42528142 - TDE2642 - hypothetical protein 2624 44.42 +1 2682325..2683794 + 489 42528143 - TDE2643 - oxidoreductase, FAD-dependent 2625 43.87 +1 2683791..2685119 + 442 42528144 - TDE2644 - pyridine nucleotide-disulphide oxidoreductase family protein 2626 40.97 0 2685112..2685504 + 130 42528145 - TDE2645 - hypothetical protein 2627 39.47 0 2685488..2686090 + 200 42528146 - TDE2646 - ABC transporter, ATP-binding protein, putative 2628 38.45 0 2686092..2687087 - 331 42528147 - TDE2647 - lipoyltransferase and lipoate-protein ligase family protein 2629 26.15 -1 2687172..2687867 - 231 42528148 - TDE2648 - hypothetical protein 2630 32.18 0 2687869..2688738 - 289 42528149 - TDE2649 - ABC transporter, ATP-binding protein 2631 35.25 0 2688756..2689121 - 121 42528150 - TDE2650 - transcriptional regulator, putative 2632 26.87 -1 2689289..2690278 + 329 42528151 - TDE2651 - ABC transporter, ATP-binding protein 2633 25.79 -1 2690275..2691030 + 251 42528152 - TDE2652 - hypothetical protein 2634 26.23 -1 2691031..2691804 + 257 42528153 - TDE2653 - hypothetical protein 2635 36.63 0 2691815..2693059 + 414 42528154 - TDE2654 - macrolide efflux protein, putative 2636 31.48 -1 2693053..2693160 - 35 42528155 - TDE2655 - hypothetical protein 2637 37.04 0 2693205..2693960 + 251 42528156 cbiK TDE2656 - cobalt chelatase 2638 31.54 0 2693962..2694630 + 222 42528157 - TDE2657 - precorrin-2 C20-methyltransferase, putative 2639 35.04 0 2694634..2695923 + 429 42528158 - TDE2658 - cobyrinic acid a,c-diamide synthase, putative 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.