version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2358 34.14 0 2406751..2407617 - 288 42527877 - TDE2376 - hypothetical protein 2359 28.26 -1 2407620..2407757 - 45 42527878 - TDE2377 - hypothetical protein 2360 38.23 0 2407859..2408797 + 312 42527879 - TDE2378 - ABC transporter, ATP-binding protein, putative 2361 29.65 -1 2408809..2409948 + 379 42527880 - TDE2379 - hypothetical protein 2362 31.53 0 2409959..2411122 + 387 42527881 - TDE2380 - hypothetical protein 2363 29.94 -1 2411209..2412357 + 382 42527882 - TDE2381 - histidine kinase-related ATPase, putative 2364 36.78 0 2412418..2412969 + 183 42527883 cobU TDE2382 - cobinamide kinase/cobinamide phosphate guanyltransferase 2365 34.99 0 2412966..2413748 + 260 42527884 cobS TDE2383 - cobalamin 5'-phosphate synthase 2366 33.67 0 2413766..2414356 + 196 42527885 - TDE2384 - phosphoglycerate mutase family protein 2367 41.37 0 2414439..2415545 + 368 42527886 - TDE2385 - D-alanine--D-alanine ligase 2368 21.80 -2 2415551..2416183 + 210 42527887 - TDE2386 - hypothetical protein 2369 38.32 0 2416180..2417802 + 540 42527888 malQ TDE2387 - 4-alpha-glucanotransferase 2370 39.64 0 2417877..2418479 + 200 42527889 clpP TDE2388 - ATP-dependent Clp protease proteolytic subunit 2371 37.43 0 2418438..2419511 - 357 42527890 cobD TDE2389 - cobalamin biosynthesis protein CobD 2372 36.69 0 2419605..2420648 - 347 42527891 - TDE2390 - hypothetical protein 2373 39.83 0 2420672..2421640 - 322 42527892 - TDE2391 - peptidyl-prolyl cis-trans isomerase 2374 35.69 0 2421763..2422440 - 225 42527893 - TDE2392 - hypothetical protein 2375 33.33 0 2422538..2422648 + 36 42527894 - TDE2393 - hypothetical protein 2376 26.04 -1 2422607..2422702 - 31 42527895 - TDE2394 - hypothetical protein 2377 37.69 0 2422834..2423544 - 236 42527896 - TDE2395 - Jag protein, putative 2378 39.45 0 2423740..2425488 - 582 42527897 - TDE2396 - putative inner membrane protein translocase component YidC 2379 32.58 0 2425523..2425654 - 43 42527898 - TDE2397 - hypothetical protein 2380 37.84 0 2425676..2425897 - 73 42527899 - TDE2398 - hypothetical protein 2381 37.82 0 2425894..2426250 - 118 42527900 rnpA TDE2399 - ribonuclease P protein component 2382 48.08 +1 2426262..2426417 - 51 42527901 rpmH TDE2400 - 50S ribosomal protein L34 2383 43.98 +1 2426646..2427782 + 378 42527902 - TDE2401 - hypothetical protein 2384 40.94 0 2427831..2428724 + 297 42527903 - TDE2402 - radical SAM domain-containing protein 2385 43.30 +1 2428731..2429372 - 213 42527904 - TDE2403 - metallo-beta-lactamase family protein 2386 39.80 0 2429403..2430794 - 463 42527905 - TDE2404 - RNA polymerase sigma-54 factor, putative 2387 43.30 +1 2430806..2432140 - 444 42527906 - TDE2405 - hypothetical protein 2388 45.33 +1 2432137..2433603 - 488 42527907 - TDE2406 - TldD/PmbA family protein 2389 47.40 +1 2433734..2435197 - 487 42527908 purF TDE2407 - amidophosphoribosyltransferase 2390 36.84 0 2435307..2435477 - 56 42527909 - TDE2408 - hypothetical protein 2391 38.51 0 2435575..2436096 - 173 42527910 - TDE2409 - hypothetical protein 2392 36.05 0 2436123..2437337 - 404 42527911 - TDE2410 - hemolysin 2393 42.14 0 2437324..2439777 - 817 42527912 glgP TDE2411 - glycogen phosphorylase 2394 31.41 -1 2439885..2440352 - 155 42527913 - TDE2412 - acetyltransferase 2395 34.23 0 2440413..2441078 - 221 42527914 - TDE2413 - hypothetical protein 2396 26.67 -1 2441111..2441710 - 199 42527915 - TDE2414 - hypothetical protein 2397 39.65 0 2441803..2442435 - 210 42527916 - TDE2415 - hypothetical protein 2398 36.94 0 2442446..2442889 - 147 42527917 - TDE2416 - hypothetical protein 2399 39.83 0 2442902..2443378 - 158 42527918 - TDE2417 - nitroimidazole resistance protein, putative 2400 44.84 +1 2443420..2443923 - 167 42527919 - TDE2418 - hypothetical protein 2401 40.43 0 2444113..2444859 - 248 42527920 - TDE2419 - hypothetical protein 2402 44.82 +1 2445050..2449324 - 1424 42527921 - TDE2420 - DNA-directed RNA polymerase subunit beta' 2403 43.29 +1 2449349..2452852 - 1167 42527922 rpoB TDE2421 - DNA-directed RNA polymerase subunit beta 2404 44.87 +1 2453001..2453390 - 129 42527923 rplL TDE2422 - 50S ribosomal protein L7/L12 2405 45.47 +1 2453507..2454124 - 205 42527924 rplJ TDE2423 - 50S ribosomal protein L10 2406 45.96 +1 2454127..2454807 - 226 42527925 rplA TDE2424 - 50S ribosomal protein L1 2407 46.30 +1 2454809..2455240 - 143 42527926 rplK TDE2425 - 50S ribosomal protein L11 2408 40.14 0 2455332..2455889 - 185 42527927 nusG TDE2426 - transcription antitermination protein NusG 2409 38.33 0 2455893..2456072 - 59 42527928 secE TDE2427 - preprotein translocase subunit SecE 2410 34.50 0 2456212..2456382 - 56 42527929 rpmG TDE2428 - 50S ribosomal protein L33 2411 33.55 0 2456718..2458127 - 469 42527930 - TDE2429 - hypothetical protein 2412 37.28 0 2458124..2459263 - 379 42527931 - TDE2430 - bacteriocin ABC transporter, bacteriocin-binding protein, putative 2413 39.78 0 2459260..2461539 - 759 42527932 - TDE2431 - bacteriocin ABC transporter, ATP-binding/permease protein, putative 2414 42.02 0 2461554..2462624 + 356 42527933 - TDE2432 - treponemal membrane protein, putative 2415 40.46 0 2462624..2463325 + 233 42527934 - TDE2433 - treponemal membrane protein, putative 2416 38.17 0 2463390..2465747 - 785 42527935 - TDE2434 - polysaccharide deacetylase family protein 2417 43.72 +1 2465956..2466552 - 198 42527936 - TDE2435 - hypothetical protein 2418 30.07 -1 2466742..2467506 + 254 42527937 - TDE2436 - hypothetical protein 2419 41.30 0 2467508..2468047 - 179 42527938 - TDE2437 - cyclic nucleotide binding domain-containing protein 2420 40.45 0 2468055..2469347 - 430 42527939 - TDE2438 - hypothetical protein 2421 46.15 +1 2469360..2470451 - 363 42527940 - TDE2439 - hypothetical protein 2422 35.03 0 2470538..2472133 - 531 42527941 - TDE2440 - ABC transporter, ATP-binding/permease protein, putative 2423 36.88 0 2472446..2472586 - 46 42527942 - TDE2441 - hypothetical protein 2424 27.16 -1 2472561..2473256 - 231 42527943 - TDE2442 - surface protein, putative 2425 29.78 -1 2473325..2473549 - 74 42527944 - TDE2443 - hypothetical protein 2426 29.75 -1 2473829..2474302 - 157 42527945 - TDE2444 - hypothetical protein 2427 29.74 -1 2474422..2474727 + 101 42527946 - TDE2445 - DNA-binding protein 2428 44.72 +1 2474864..2476339 - 491 42527947 - TDE2446 - malate dehydrogenase 2429 36.95 0 2476410..2477018 - 202 42527948 aroK TDE2447 - shikimate kinase 2430 37.87 0 2477067..2477507 - 146 42527949 - TDE2448 - hypothetical protein 2431 39.73 0 2477550..2478956 - 468 42527950 - TDE2449 - hypothetical protein 2432 39.31 0 2479045..2479947 + 300 42527951 - TDE2450 - ankyrin repeat-containing protein 2433 43.49 +1 2479972..2481015 + 347 42527952 queA TDE2451 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2434 26.94 -1 2481150..2481446 + 98 42527953 - TDE2452 - hypothetical protein 2435 32.82 0 2481577..2482161 + 194 42527954 - TDE2453 - hypothetical protein 2436 33.92 0 2482441..2483466 - 341 42527955 - TDE2454 - hypothetical protein 2437 38.81 0 2484226..2484663 - 145 42527956 - TDE2456 - hypothetical protein 2438 32.65 0 2484788..2485660 - 290 42527957 - TDE2457 - hypothetical protein 2439 43.59 +1 2485754..2485909 + 51 42527958 - TDE2458 - hypothetical protein 2440 38.01 0 2485854..2486024 - 56 42527959 - TDE2459 - hypothetical protein 2441 44.99 +1 2486123..2487289 + 388 42527960 - TDE2460 - aminotransferase, class V 2442 41.69 0 2487286..2488350 - 354 42527961 selD TDE2461 - selenide, water dikinase (selenocysteine-containing) 2443 31.67 0 2488395..2488514 - 39 42527962 - TDE2462 - hypothetical protein 2444 38.14 0 2488630..2489253 + 207 42527963 - TDE2463 - hypothetical protein 2445 34.69 0 2489283..2489429 + 48 42527964 - TDE2464 - hypothetical protein 2446 36.78 0 2489481..2489741 - 86 42527965 - TDE2465 - hypothetical protein 2447 38.10 0 2489741..2489950 - 69 42527966 - TDE2466 - hypothetical protein 2448 42.76 0 2489971..2491020 - 349 42527967 - TDE2467 - hypothetical protein 2449 32.84 0 2491045..2491245 + 66 42527968 - TDE2468 - hypothetical protein 2450 36.23 0 2491326..2492639 - 437 42527969 - TDE2469 - hexokinase family protein 2451 44.70 +1 2492689..2493858 - 389 42527970 metK TDE2470 - S-adenosylmethionine synthetase 2452 36.57 0 2493954..2495036 - 360 42527971 - TDE2471 - hypothetical protein 2453 34.85 0 2495102..2496286 + 394 42527972 - TDE2472 - ISTde1, transposase 2454 36.67 0 2496438..2496647 + 69 42527973 rpsU TDE2473 - 30S ribosomal protein S21 2455 39.19 0 2496692..2497186 - 164 42527974 - TDE2474 - acetyltransferase 2456 40.88 0 2497220..2498611 - 463 42527975 - TDE2475 - MATE efflux family protein 2457 44.73 +1 2498611..2499540 - 309 42527976 arcC TDE2476 - carbamate kinase 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.