version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2334 43.43 +1 2387375..2389246 + 623 42527853 flgK TDE2352 - flagellar hook-associated protein FlgK 2335 45.43 +1 2389269..2390516 + 415 42527854 - TDE2353 - flagellar hook-associated protein FlgL 2336 40.99 0 2390535..2390978 + 147 42527855 - TDE2354 - flagellar assembly protein FliW 2337 39.47 0 2390978..2391205 + 75 42527856 csrA TDE2355 - carbon storage regulator 2338 38.49 0 2391229..2392158 + 309 42527857 - TDE2356 - iron compound ABC transporter, periplasmic iron compound-binding protein, putative 2339 46.04 +1 2392178..2393161 + 327 42527858 - TDE2357 - iron compound ABC transporter, permease protein 2340 33.33 0 2393219..2394226 - 335 42527859 - TDE2358 - hypothetical protein 2341 36.35 0 2394243..2394872 - 209 42527860 - TDE2359 - DAK2 domain-containing protein 2342 38.00 0 2394882..2395889 - 335 42527861 - TDE2360 - dihydroxyacetone kinase family protein 2343 35.06 0 2395899..2397056 - 385 42527862 - TDE2361 - high-affinity branched chain amino acid ABC transporter, amino acid-binding protein 2344 35.10 0 2397053..2397562 - 169 42527863 - TDE2362 - hypothetical protein 2345 35.31 0 2397562..2398269 - 235 42527864 - TDE2363 - high-affinity branched chain amino acid ABC transporter, ATP-binding protein 2346 33.33 0 2398269..2399039 - 256 42527865 - TDE2364 - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 2347 34.90 0 2399020..2400039 - 339 42527866 - TDE2365 - high-affinity branched-chain amino acid ABC transporter, permease protein 2348 35.33 0 2400049..2400948 - 299 42527867 - TDE2366 - high-affinity branched-chain amino acid ABC transporter, permease protein 2349 32.40 0 2401220..2401864 + 214 42527868 - TDE2367 - transcriptional regulator, putative 2350 43.07 +1 2401870..2402331 + 153 42527869 - TDE2368 - YbaK/prolyl-tRNA synthetase domain-containing protein 2351 38.98 0 2402432..2403529 + 365 42527870 - TDE2369 - hypothetical protein 2352 34.06 0 2403530..2403667 + 45 42527871 - TDE2370 - hypothetical protein 2353 39.81 0 2403723..2404556 + 277 42527872 - TDE2371 - iron-sulfur cluster-binding protein 2354 39.74 0 2404651..2405259 + 202 42527873 - TDE2372 - hypothetical protein 2355 36.33 0 2405263..2405862 + 199 42527874 - TDE2373 - precorrin-6Y C5,15-methyltransferase, putative 2356 37.06 0 2405849..2406412 + 187 42527875 - TDE2374 - precorrin-8W decarboxylase, putative 2357 29.87 -1 2406434..2406751 - 105 42527876 - TDE2375 - hypothetical protein 2358 34.14 0 2406751..2407617 - 288 42527877 - TDE2376 - hypothetical protein 2359 28.26 -1 2407620..2407757 - 45 42527878 - TDE2377 - hypothetical protein 2360 38.23 0 2407859..2408797 + 312 42527879 - TDE2378 - ABC transporter, ATP-binding protein, putative 2361 29.65 -1 2408809..2409948 + 379 42527880 - TDE2379 - hypothetical protein 2362 31.53 0 2409959..2411122 + 387 42527881 - TDE2380 - hypothetical protein 2363 29.94 -1 2411209..2412357 + 382 42527882 - TDE2381 - histidine kinase-related ATPase, putative 2364 36.78 0 2412418..2412969 + 183 42527883 cobU TDE2382 - cobinamide kinase/cobinamide phosphate guanyltransferase 2365 34.99 0 2412966..2413748 + 260 42527884 cobS TDE2383 - cobalamin 5'-phosphate synthase 2366 33.67 0 2413766..2414356 + 196 42527885 - TDE2384 - phosphoglycerate mutase family protein 2367 41.37 0 2414439..2415545 + 368 42527886 - TDE2385 - D-alanine--D-alanine ligase 2368 21.80 -2 2415551..2416183 + 210 42527887 - TDE2386 - hypothetical protein 2369 38.32 0 2416180..2417802 + 540 42527888 malQ TDE2387 - 4-alpha-glucanotransferase 2370 39.64 0 2417877..2418479 + 200 42527889 clpP TDE2388 - ATP-dependent Clp protease proteolytic subunit 2371 37.43 0 2418438..2419511 - 357 42527890 cobD TDE2389 - cobalamin biosynthesis protein CobD 2372 36.69 0 2419605..2420648 - 347 42527891 - TDE2390 - hypothetical protein 2373 39.83 0 2420672..2421640 - 322 42527892 - TDE2391 - peptidyl-prolyl cis-trans isomerase 2374 35.69 0 2421763..2422440 - 225 42527893 - TDE2392 - hypothetical protein 2375 33.33 0 2422538..2422648 + 36 42527894 - TDE2393 - hypothetical protein 2376 26.04 -1 2422607..2422702 - 31 42527895 - TDE2394 - hypothetical protein 2377 37.69 0 2422834..2423544 - 236 42527896 - TDE2395 - Jag protein, putative 2378 39.45 0 2423740..2425488 - 582 42527897 - TDE2396 - putative inner membrane protein translocase component YidC 2379 32.58 0 2425523..2425654 - 43 42527898 - TDE2397 - hypothetical protein 2380 37.84 0 2425676..2425897 - 73 42527899 - TDE2398 - hypothetical protein 2381 37.82 0 2425894..2426250 - 118 42527900 rnpA TDE2399 - ribonuclease P protein component 2382 48.08 +1 2426262..2426417 - 51 42527901 rpmH TDE2400 - 50S ribosomal protein L34 2383 43.98 +1 2426646..2427782 + 378 42527902 - TDE2401 - hypothetical protein 2384 40.94 0 2427831..2428724 + 297 42527903 - TDE2402 - radical SAM domain-containing protein 2385 43.30 +1 2428731..2429372 - 213 42527904 - TDE2403 - metallo-beta-lactamase family protein 2386 39.80 0 2429403..2430794 - 463 42527905 - TDE2404 - RNA polymerase sigma-54 factor, putative 2387 43.30 +1 2430806..2432140 - 444 42527906 - TDE2405 - hypothetical protein 2388 45.33 +1 2432137..2433603 - 488 42527907 - TDE2406 - TldD/PmbA family protein 2389 47.40 +1 2433734..2435197 - 487 42527908 purF TDE2407 - amidophosphoribosyltransferase 2390 36.84 0 2435307..2435477 - 56 42527909 - TDE2408 - hypothetical protein 2391 38.51 0 2435575..2436096 - 173 42527910 - TDE2409 - hypothetical protein 2392 36.05 0 2436123..2437337 - 404 42527911 - TDE2410 - hemolysin 2393 42.14 0 2437324..2439777 - 817 42527912 glgP TDE2411 - glycogen phosphorylase 2394 31.41 -1 2439885..2440352 - 155 42527913 - TDE2412 - acetyltransferase 2395 34.23 0 2440413..2441078 - 221 42527914 - TDE2413 - hypothetical protein 2396 26.67 -1 2441111..2441710 - 199 42527915 - TDE2414 - hypothetical protein 2397 39.65 0 2441803..2442435 - 210 42527916 - TDE2415 - hypothetical protein 2398 36.94 0 2442446..2442889 - 147 42527917 - TDE2416 - hypothetical protein 2399 39.83 0 2442902..2443378 - 158 42527918 - TDE2417 - nitroimidazole resistance protein, putative 2400 44.84 +1 2443420..2443923 - 167 42527919 - TDE2418 - hypothetical protein 2401 40.43 0 2444113..2444859 - 248 42527920 - TDE2419 - hypothetical protein 2402 44.82 +1 2445050..2449324 - 1424 42527921 - TDE2420 - DNA-directed RNA polymerase subunit beta' 2403 43.29 +1 2449349..2452852 - 1167 42527922 rpoB TDE2421 - DNA-directed RNA polymerase subunit beta 2404 44.87 +1 2453001..2453390 - 129 42527923 rplL TDE2422 - 50S ribosomal protein L7/L12 2405 45.47 +1 2453507..2454124 - 205 42527924 rplJ TDE2423 - 50S ribosomal protein L10 2406 45.96 +1 2454127..2454807 - 226 42527925 rplA TDE2424 - 50S ribosomal protein L1 2407 46.30 +1 2454809..2455240 - 143 42527926 rplK TDE2425 - 50S ribosomal protein L11 2408 40.14 0 2455332..2455889 - 185 42527927 nusG TDE2426 - transcription antitermination protein NusG 2409 38.33 0 2455893..2456072 - 59 42527928 secE TDE2427 - preprotein translocase subunit SecE 2410 34.50 0 2456212..2456382 - 56 42527929 rpmG TDE2428 - 50S ribosomal protein L33 2411 33.55 0 2456718..2458127 - 469 42527930 - TDE2429 - hypothetical protein 2412 37.28 0 2458124..2459263 - 379 42527931 - TDE2430 - bacteriocin ABC transporter, bacteriocin-binding protein, putative 2413 39.78 0 2459260..2461539 - 759 42527932 - TDE2431 - bacteriocin ABC transporter, ATP-binding/permease protein, putative 2414 42.02 0 2461554..2462624 + 356 42527933 - TDE2432 - treponemal membrane protein, putative 2415 40.46 0 2462624..2463325 + 233 42527934 - TDE2433 - treponemal membrane protein, putative 2416 38.17 0 2463390..2465747 - 785 42527935 - TDE2434 - polysaccharide deacetylase family protein 2417 43.72 +1 2465956..2466552 - 198 42527936 - TDE2435 - hypothetical protein 2418 30.07 -1 2466742..2467506 + 254 42527937 - TDE2436 - hypothetical protein 2419 41.30 0 2467508..2468047 - 179 42527938 - TDE2437 - cyclic nucleotide binding domain-containing protein 2420 40.45 0 2468055..2469347 - 430 42527939 - TDE2438 - hypothetical protein 2421 46.15 +1 2469360..2470451 - 363 42527940 - TDE2439 - hypothetical protein 2422 35.03 0 2470538..2472133 - 531 42527941 - TDE2440 - ABC transporter, ATP-binding/permease protein, putative 2423 36.88 0 2472446..2472586 - 46 42527942 - TDE2441 - hypothetical protein 2424 27.16 -1 2472561..2473256 - 231 42527943 - TDE2442 - surface protein, putative 2425 29.78 -1 2473325..2473549 - 74 42527944 - TDE2443 - hypothetical protein 2426 29.75 -1 2473829..2474302 - 157 42527945 - TDE2444 - hypothetical protein 2427 29.74 -1 2474422..2474727 + 101 42527946 - TDE2445 - DNA-binding protein 2428 44.72 +1 2474864..2476339 - 491 42527947 - TDE2446 - malate dehydrogenase 2429 36.95 0 2476410..2477018 - 202 42527948 aroK TDE2447 - shikimate kinase 2430 37.87 0 2477067..2477507 - 146 42527949 - TDE2448 - hypothetical protein 2431 39.73 0 2477550..2478956 - 468 42527950 - TDE2449 - hypothetical protein 2432 39.31 0 2479045..2479947 + 300 42527951 - TDE2450 - ankyrin repeat-containing protein 2433 43.49 +1 2479972..2481015 + 347 42527952 queA TDE2451 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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