version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2295 36.42 0 2348591..2349109 + 172 42527814 - TDE2312 - hypothetical protein 2296 44.71 +1 2349596..2352100 - 834 42527815 - TDE2313 - hypothetical protein 2297 35.77 0 2352194..2352439 + 81 42527816 - TDE2314 - hypothetical protein 2298 38.29 0 2352412..2353239 + 275 42527817 - TDE2315 - hypothetical protein 2299 39.19 0 2353220..2354038 + 272 42527818 - TDE2316 - hypothetical protein 2300 42.66 0 2354208..2354861 - 217 42527819 hlyIII TDE2317 - hemolysin III 2301 43.72 +1 2355005..2355928 + 307 42527820 - TDE2318 - LysM/M23/M37 peptidase 2302 39.09 0 2355925..2356410 - 161 42527821 - TDE2319 - hypothetical protein 2303 38.01 0 2356400..2357041 - 213 42527822 - TDE2320 - RNA polymerase sigma-24 factor, putative 2304 38.14 0 2357038..2357391 - 117 42527823 - TDE2321 - hypothetical protein 2305 35.64 0 2357424..2357900 - 158 42527824 - TDE2322 - flagellar protein FliL-related protein 2306 40.79 0 2357954..2359174 - 406 42527825 - TDE2323 - mechanosensitive ion channel family protein 2307 37.61 0 2359328..2359981 + 217 42527826 - TDE2324 - DNA-binding response regulator 2308 44.68 +1 2360092..2361237 + 381 42527827 - TDE2325 - hypothetical protein 2309 43.44 +1 2361227..2362087 + 286 42527828 - TDE2326 - cobyric acid synthase CobQ, putative 2310 46.09 +1 2362138..2364717 - 859 42527829 clpB TDE2327 - ATP-dependent Clp protease, ATP-binding subunit ClpB 2311 42.88 0 2364874..2366424 + 516 42527830 mtrF TDE2328 - efflux pump component MtrF 2312 40.82 0 2366437..2366583 - 48 42527831 - TDE2329 - hypothetical protein 2313 40.61 0 2366594..2366758 + 54 42527832 - TDE2330 - hypothetical protein 2314 30.38 -1 2367628..2367864 - 78 42527833 - TDE2332 - hypothetical protein 2315 38.03 0 2367961..2368641 - 226 42527834 - TDE2333 - sanA protein, putative 2316 29.35 -1 2368769..2369647 + 292 42527835 - TDE2334 - hypothetical protein 2317 42.45 0 2369781..2372018 + 745 42527836 - TDE2335 - ATP-dependent DNA helicase UvrD 2318 41.59 0 2372015..2373286 - 423 42527837 - TDE2336 - sodium/dicarboxylate symporter family protein 2319 42.93 0 2373435..2374664 + 409 42527838 - TDE2337 - aminopeptidase 2320 34.38 0 2374714..2374809 - 31 42527839 - TDE2338 - hypothetical protein 2321 43.46 +1 2374985..2377561 + 858 42527840 leuS TDE2339 - leucyl-tRNA synthetase 2322 37.19 0 2377583..2377945 - 120 42527841 - TDE2340 - FMN-binding domain-containing protein 2323 40.87 0 2377956..2379308 - 450 42527842 - TDE2341 - membrane-associated zinc metalloprotease, putative 2324 40.58 0 2379328..2380473 - 381 42527843 dxr TDE2342 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2325 37.18 0 2380473..2381330 - 285 42527844 cdsA TDE2343 - phosphatidate cytidylyltransferase 2326 39.04 0 2381352..2382035 - 227 42527845 uppS TDE2344 - undecaprenyl diphosphate synthase 2327 39.96 0 2382036..2382593 - 185 42527846 frr TDE2345 - ribosome recycling factor 2328 40.93 0 2382677..2383519 - 280 42527847 tsf TDE2346 - elongation factor Ts 2329 40.75 0 2383593..2384468 - 291 42527848 rpsB TDE2347 - 30S ribosomal protein S2 2330 39.22 0 2384698..2385309 - 203 42527849 maf TDE2348 - maf protein 2331 38.16 0 2385326..2386030 - 234 42527850 - TDE2349 - hypothetical protein 2332 37.11 0 2386143..2386751 - 202 42527851 - TDE2350 - putative lipoprotein 2333 33.74 0 2386873..2387364 + 163 42527852 - TDE2351 - hypothetical protein 2334 43.43 +1 2387375..2389246 + 623 42527853 flgK TDE2352 - flagellar hook-associated protein FlgK 2335 45.43 +1 2389269..2390516 + 415 42527854 - TDE2353 - flagellar hook-associated protein FlgL 2336 40.99 0 2390535..2390978 + 147 42527855 - TDE2354 - flagellar assembly protein FliW 2337 39.47 0 2390978..2391205 + 75 42527856 csrA TDE2355 - carbon storage regulator 2338 38.49 0 2391229..2392158 + 309 42527857 - TDE2356 - iron compound ABC transporter, periplasmic iron compound-binding protein, putative 2339 46.04 +1 2392178..2393161 + 327 42527858 - TDE2357 - iron compound ABC transporter, permease protein 2340 33.33 0 2393219..2394226 - 335 42527859 - TDE2358 - hypothetical protein 2341 36.35 0 2394243..2394872 - 209 42527860 - TDE2359 - DAK2 domain-containing protein 2342 38.00 0 2394882..2395889 - 335 42527861 - TDE2360 - dihydroxyacetone kinase family protein 2343 35.06 0 2395899..2397056 - 385 42527862 - TDE2361 - high-affinity branched chain amino acid ABC transporter, amino acid-binding protein 2344 35.10 0 2397053..2397562 - 169 42527863 - TDE2362 - hypothetical protein 2345 35.31 0 2397562..2398269 - 235 42527864 - TDE2363 - high-affinity branched chain amino acid ABC transporter, ATP-binding protein 2346 33.33 0 2398269..2399039 - 256 42527865 - TDE2364 - high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 2347 34.90 0 2399020..2400039 - 339 42527866 - TDE2365 - high-affinity branched-chain amino acid ABC transporter, permease protein 2348 35.33 0 2400049..2400948 - 299 42527867 - TDE2366 - high-affinity branched-chain amino acid ABC transporter, permease protein 2349 32.40 0 2401220..2401864 + 214 42527868 - TDE2367 - transcriptional regulator, putative 2350 43.07 +1 2401870..2402331 + 153 42527869 - TDE2368 - YbaK/prolyl-tRNA synthetase domain-containing protein 2351 38.98 0 2402432..2403529 + 365 42527870 - TDE2369 - hypothetical protein 2352 34.06 0 2403530..2403667 + 45 42527871 - TDE2370 - hypothetical protein 2353 39.81 0 2403723..2404556 + 277 42527872 - TDE2371 - iron-sulfur cluster-binding protein 2354 39.74 0 2404651..2405259 + 202 42527873 - TDE2372 - hypothetical protein 2355 36.33 0 2405263..2405862 + 199 42527874 - TDE2373 - precorrin-6Y C5,15-methyltransferase, putative 2356 37.06 0 2405849..2406412 + 187 42527875 - TDE2374 - precorrin-8W decarboxylase, putative 2357 29.87 -1 2406434..2406751 - 105 42527876 - TDE2375 - hypothetical protein 2358 34.14 0 2406751..2407617 - 288 42527877 - TDE2376 - hypothetical protein 2359 28.26 -1 2407620..2407757 - 45 42527878 - TDE2377 - hypothetical protein 2360 38.23 0 2407859..2408797 + 312 42527879 - TDE2378 - ABC transporter, ATP-binding protein, putative 2361 29.65 -1 2408809..2409948 + 379 42527880 - TDE2379 - hypothetical protein 2362 31.53 0 2409959..2411122 + 387 42527881 - TDE2380 - hypothetical protein 2363 29.94 -1 2411209..2412357 + 382 42527882 - TDE2381 - histidine kinase-related ATPase, putative 2364 36.78 0 2412418..2412969 + 183 42527883 cobU TDE2382 - cobinamide kinase/cobinamide phosphate guanyltransferase 2365 34.99 0 2412966..2413748 + 260 42527884 cobS TDE2383 - cobalamin 5'-phosphate synthase 2366 33.67 0 2413766..2414356 + 196 42527885 - TDE2384 - phosphoglycerate mutase family protein 2367 41.37 0 2414439..2415545 + 368 42527886 - TDE2385 - D-alanine--D-alanine ligase 2368 21.80 -2 2415551..2416183 + 210 42527887 - TDE2386 - hypothetical protein 2369 38.32 0 2416180..2417802 + 540 42527888 malQ TDE2387 - 4-alpha-glucanotransferase 2370 39.64 0 2417877..2418479 + 200 42527889 clpP TDE2388 - ATP-dependent Clp protease proteolytic subunit 2371 37.43 0 2418438..2419511 - 357 42527890 cobD TDE2389 - cobalamin biosynthesis protein CobD 2372 36.69 0 2419605..2420648 - 347 42527891 - TDE2390 - hypothetical protein 2373 39.83 0 2420672..2421640 - 322 42527892 - TDE2391 - peptidyl-prolyl cis-trans isomerase 2374 35.69 0 2421763..2422440 - 225 42527893 - TDE2392 - hypothetical protein 2375 33.33 0 2422538..2422648 + 36 42527894 - TDE2393 - hypothetical protein 2376 26.04 -1 2422607..2422702 - 31 42527895 - TDE2394 - hypothetical protein 2377 37.69 0 2422834..2423544 - 236 42527896 - TDE2395 - Jag protein, putative 2378 39.45 0 2423740..2425488 - 582 42527897 - TDE2396 - putative inner membrane protein translocase component YidC 2379 32.58 0 2425523..2425654 - 43 42527898 - TDE2397 - hypothetical protein 2380 37.84 0 2425676..2425897 - 73 42527899 - TDE2398 - hypothetical protein 2381 37.82 0 2425894..2426250 - 118 42527900 rnpA TDE2399 - ribonuclease P protein component 2382 48.08 +1 2426262..2426417 - 51 42527901 rpmH TDE2400 - 50S ribosomal protein L34 2383 43.98 +1 2426646..2427782 + 378 42527902 - TDE2401 - hypothetical protein 2384 40.94 0 2427831..2428724 + 297 42527903 - TDE2402 - radical SAM domain-containing protein 2385 43.30 +1 2428731..2429372 - 213 42527904 - TDE2403 - metallo-beta-lactamase family protein 2386 39.80 0 2429403..2430794 - 463 42527905 - TDE2404 - RNA polymerase sigma-54 factor, putative 2387 43.30 +1 2430806..2432140 - 444 42527906 - TDE2405 - hypothetical protein 2388 45.33 +1 2432137..2433603 - 488 42527907 - TDE2406 - TldD/PmbA family protein 2389 47.40 +1 2433734..2435197 - 487 42527908 purF TDE2407 - amidophosphoribosyltransferase 2390 36.84 0 2435307..2435477 - 56 42527909 - TDE2408 - hypothetical protein 2391 38.51 0 2435575..2436096 - 173 42527910 - TDE2409 - hypothetical protein 2392 36.05 0 2436123..2437337 - 404 42527911 - TDE2410 - hemolysin 2393 42.14 0 2437324..2439777 - 817 42527912 glgP TDE2411 - glycogen phosphorylase 2394 31.41 -1 2439885..2440352 - 155 42527913 - TDE2412 - acetyltransferase 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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