version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2228 42.85 0 2284380..2286197 + 605 42527747 - TDE2245 - DNA topoisomerase IV subunit B 2229 39.92 0 2286272..2286514 + 80 42527748 - TDE2246 - hypothetical protein 2230 36.97 0 2286502..2286831 + 109 42527749 - TDE2247 - PemK family protein 2231 42.32 0 2286846..2287568 - 240 42527750 - TDE2248 - HesA/MoeB/ThiF family protein 2232 39.85 0 2287588..2288646 - 352 42527751 mraY TDE2249 - phospho-N-acetylmuramoyl-pentapeptide-transferase 2233 40.03 0 2288708..2289469 + 253 42527752 - TDE2250 - hypothetical protein 2234 42.28 0 2289580..2290842 + 420 42527753 uraA TDE2251 - uracil transporter 2235 32.32 0 2290936..2291133 + 65 42527754 - TDE2252 - hypothetical protein 2236 37.41 0 2291143..2291559 + 138 42527755 - TDE2253 - hypothetical protein 2237 32.83 0 2291535..2291732 - 65 42527756 - TDE2254 - hypothetical protein 2238 32.94 0 2291731..2292243 + 170 42527757 - TDE2255 - hypothetical protein 2239 37.65 0 2292296..2293477 - 393 42527758 - TDE2256 - hypothetical protein 2240 43.70 +1 2293593..2295194 - 533 42527759 - TDE2257 - 5'-nucleotidase family protein 2241 45.13 +1 2295424..2296491 - 355 42527760 - TDE2258 - surface antigen BspA, putative 2242 47.12 +1 2296617..2297327 - 236 42527761 - TDE2259 - hypothetical protein 2243 41.03 0 2297478..2297633 + 51 42527762 - TDE2260 - hypothetical protein 2244 39.39 0 2298005..2298103 - 32 42527763 - TDE2261 - hypothetical protein 2245 40.72 0 2298123..2299367 - 414 42527764 - TDE2262 - U32 family peptidase 2246 41.42 0 2299367..2300281 - 304 42527765 - TDE2263 - acetyl hydrolase, putative 2247 37.91 0 2300333..2302123 - 596 42527766 - TDE2264 - ABC transporter, ATP-binding/permease protein 2248 35.90 0 2302305..2302694 + 129 42527767 - TDE2265 - hypothetical protein 2249 32.12 0 2303132..2304118 - 328 42527768 - TDE2266 - reverse transcriptase family protein 2250 32.51 0 2304072..2304554 - 160 42527769 - TDE2267 - HRDC domain-containing protein 2251 56.52 +2 2304912..2305049 - 45 42527770 - TDE2268 - hypothetical protein 2252 46.46 +1 2305021..2306010 - 329 42527771 - TDE2269 - hypothetical protein 2253 41.33 0 2306370..2308469 - 699 42527772 - TDE2270 - methyl-accepting chemotaxis protein 2254 41.71 0 2308571..2309155 - 194 42527773 - TDE2271 - HAM1 protein 2255 32.07 0 2309070..2310098 - 342 42527774 - TDE2272 - hypothetical protein 2256 25.81 -1 2310120..2310212 + 30 42527775 - TDE2273 - hypothetical protein 2257 39.95 0 2310341..2311216 + 291 42527776 - TDE2274 - hypothetical protein 2258 42.50 0 2311216..2312022 + 268 42527777 truA TDE2275 - tRNA pseudouridine synthase A 2259 32.38 0 2312035..2312766 - 243 42527778 - TDE2276 - hypothetical protein 2260 41.27 0 2312820..2313575 + 251 42527779 - TDE2277 - Sir2 family transcriptional regulator 2261 29.17 -1 2313638..2313901 + 87 42527780 - TDE2278 - hypothetical protein 2262 36.75 0 2313871..2315361 + 496 42527781 - TDE2279 - HD domain-containing protein 2263 40.11 0 2315382..2317448 - 688 42527782 - TDE2280 - Slt family transglycosylase 2264 37.99 0 2317510..2318583 - 357 42527783 - TDE2281 - LysM domain-containing protein 2265 39.88 0 2318718..2319755 - 345 42527784 - TDE2282 - tRNA synthetase, class II family protein 2266 42.86 0 2319769..2321007 - 412 42527785 - TDE2283 - permease, putative 2267 39.92 0 2321015..2321986 - 323 42527786 - TDE2284 - RND family efflux transporter MFP subunit 2268 36.66 0 2321987..2323399 - 470 42527787 - TDE2285 - hypothetical protein 2269 41.37 0 2323494..2324339 + 281 42527788 - TDE2286 - MazG family protein 2270 39.87 0 2324399..2325148 - 249 42527789 - TDE2287 - peptidyl-prolyl cis-trans isomerase, FKBP-type 2271 30.43 -1 2325252..2325734 - 160 42527790 - TDE2288 - hypothetical protein 2272 41.38 0 2325904..2327556 + 550 42527791 - TDE2289 - phosphoribulokinase/uridine kinase family protein 2273 42.26 0 2327617..2328243 + 208 42527792 - TDE2290 - transcriptional regulator, putative 2274 39.48 0 2328230..2328961 + 243 42527793 ispD TDE2291 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2275 41.15 0 2328958..2329443 + 161 42527794 ispF TDE2292 - 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2276 39.00 0 2329415..2332660 - 1081 42527795 - TDE2293 - hypothetical protein 2277 37.18 0 2332699..2333400 - 233 42527796 - TDE2294 - HAD superfamily hydrolase 2278 37.93 0 2333474..2334343 + 289 42527797 - TDE2295 - mechanosensitive ion channel family protein 2279 42.00 0 2334373..2336427 - 684 42527798 - TDE2296 - hypothetical protein 2280 38.47 0 2336429..2337109 - 226 42527799 - TDE2297 - TPR domain-containing protein 2281 41.04 0 2337203..2338357 - 384 42527800 - TDE2298 - galactokinase, putative 2282 38.15 0 2338420..2339997 + 525 42527801 lnt TDE2299 - apolipoprotein N-acyltransferase 2283 40.69 0 2340043..2341524 - 493 42527802 - TDE2300 - trypsin domain/PDZ domain-containing protein 2284 38.26 0 2341649..2341912 + 87 42527803 - TDE2301 - FlhB domain-containing protein 2285 39.26 0 2341930..2343195 + 421 42527804 - TDE2302 - HD domain-containing protein 2286 34.35 0 2343195..2343587 + 130 42527805 - TDE2303 - hypothetical protein 2287 37.04 0 2343580..2343795 + 71 42527806 - TDE2304 - hypothetical protein 2288 36.64 0 2343792..2344244 + 150 42527807 - TDE2305 - hypothetical protein 2289 35.09 0 2344228..2344341 - 37 42527808 - TDE2306 - hypothetical protein 2290 44.13 +1 2344325..2345593 - 422 42527809 serS TDE2307 - seryl-tRNA synthetase 2291 37.78 0 2345744..2346373 + 209 42527810 - TDE2308 - hypothetical protein 2292 45.78 +1 2346648..2348189 - 513 42527811 - TDE2309 - sigma-54 dependent transcriptional regulator, putative 2293 51.11 +2 2348182..2348316 + 44 42527812 - TDE2310 - hypothetical protein 2294 28.33 -1 2348378..2348497 + 39 42527813 - TDE2311 - hypothetical protein 2295 36.42 0 2348591..2349109 + 172 42527814 - TDE2312 - hypothetical protein 2296 44.71 +1 2349596..2352100 - 834 42527815 - TDE2313 - hypothetical protein 2297 35.77 0 2352194..2352439 + 81 42527816 - TDE2314 - hypothetical protein 2298 38.29 0 2352412..2353239 + 275 42527817 - TDE2315 - hypothetical protein 2299 39.19 0 2353220..2354038 + 272 42527818 - TDE2316 - hypothetical protein 2300 42.66 0 2354208..2354861 - 217 42527819 hlyIII TDE2317 - hemolysin III 2301 43.72 +1 2355005..2355928 + 307 42527820 - TDE2318 - LysM/M23/M37 peptidase 2302 39.09 0 2355925..2356410 - 161 42527821 - TDE2319 - hypothetical protein 2303 38.01 0 2356400..2357041 - 213 42527822 - TDE2320 - RNA polymerase sigma-24 factor, putative 2304 38.14 0 2357038..2357391 - 117 42527823 - TDE2321 - hypothetical protein 2305 35.64 0 2357424..2357900 - 158 42527824 - TDE2322 - flagellar protein FliL-related protein 2306 40.79 0 2357954..2359174 - 406 42527825 - TDE2323 - mechanosensitive ion channel family protein 2307 37.61 0 2359328..2359981 + 217 42527826 - TDE2324 - DNA-binding response regulator 2308 44.68 +1 2360092..2361237 + 381 42527827 - TDE2325 - hypothetical protein 2309 43.44 +1 2361227..2362087 + 286 42527828 - TDE2326 - cobyric acid synthase CobQ, putative 2310 46.09 +1 2362138..2364717 - 859 42527829 clpB TDE2327 - ATP-dependent Clp protease, ATP-binding subunit ClpB 2311 42.88 0 2364874..2366424 + 516 42527830 mtrF TDE2328 - efflux pump component MtrF 2312 40.82 0 2366437..2366583 - 48 42527831 - TDE2329 - hypothetical protein 2313 40.61 0 2366594..2366758 + 54 42527832 - TDE2330 - hypothetical protein 2314 30.38 -1 2367628..2367864 - 78 42527833 - TDE2332 - hypothetical protein 2315 38.03 0 2367961..2368641 - 226 42527834 - TDE2333 - sanA protein, putative 2316 29.35 -1 2368769..2369647 + 292 42527835 - TDE2334 - hypothetical protein 2317 42.45 0 2369781..2372018 + 745 42527836 - TDE2335 - ATP-dependent DNA helicase UvrD 2318 41.59 0 2372015..2373286 - 423 42527837 - TDE2336 - sodium/dicarboxylate symporter family protein 2319 42.93 0 2373435..2374664 + 409 42527838 - TDE2337 - aminopeptidase 2320 34.38 0 2374714..2374809 - 31 42527839 - TDE2338 - hypothetical protein 2321 43.46 +1 2374985..2377561 + 858 42527840 leuS TDE2339 - leucyl-tRNA synthetase 2322 37.19 0 2377583..2377945 - 120 42527841 - TDE2340 - FMN-binding domain-containing protein 2323 40.87 0 2377956..2379308 - 450 42527842 - TDE2341 - membrane-associated zinc metalloprotease, putative 2324 40.58 0 2379328..2380473 - 381 42527843 dxr TDE2342 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2325 37.18 0 2380473..2381330 - 285 42527844 cdsA TDE2343 - phosphatidate cytidylyltransferase 2326 39.04 0 2381352..2382035 - 227 42527845 uppS TDE2344 - undecaprenyl diphosphate synthase 2327 39.96 0 2382036..2382593 - 185 42527846 frr TDE2345 - ribosome recycling factor 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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