version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1634 35.29 0 1695633..1696142 - 169 42527153 def TDE1645 - polypeptide deformylase 1635 25.76 -1 1696139..1696270 - 43 42527154 - TDE1646 - hypothetical protein 1636 33.62 0 1696245..1696592 - 115 42527155 - TDE1647 - DNA-binding protein 1637 29.80 -1 1696576..1696830 - 84 42527156 - TDE1648 - hypothetical protein 1638 33.95 0 1696880..1697527 - 215 42527157 - TDE1649 - hypothetical protein 1639 38.60 0 1697467..1698207 - 246 42527158 - TDE1650 - ABC transporter, ATP-binding protein 1640 41.01 0 1698211..1698822 - 203 42527159 - TDE1651 - BioY family protein 1641 37.23 0 1698947..1700614 - 555 42527160 - TDE1652 - ABC transporter, ATP-binding/permease protein 1642 41.22 0 1702359..1704971 + 870 42527161 - TDE1654 - ATP-dependent helicase HrpA, putative 1643 35.03 0 1705098..1705628 + 176 42527162 - TDE1655 - hypothetical protein 1644 38.21 0 1705649..1707310 - 553 42527163 - TDE1656 - putative lipoprotein 1645 37.96 0 1707320..1707730 - 136 42527164 nusB TDE1657 - transcription antitermination protein NusB 1646 33.61 0 1707745..1708821 - 358 42527165 - TDE1658 - basic membrane protein, putative 1647 42.32 0 1708921..1710723 - 600 42527166 alaS TDE1659 - alanyl-tRNA synthetase 1648 38.51 0 1710800..1715356 - 1518 42527167 - TDE1660 - leucine rich repeat domain-containing protein 1649 32.87 0 1715542..1715970 + 142 42527168 - TDE1661 - hypothetical protein 1650 42.38 0 1716038..1717375 + 445 42527169 dnaB TDE1662 - replicative DNA helicase 1651 34.92 0 1717459..1717962 + 167 42527170 - TDE1663 - OmpA family protein 1652 40.25 0 1718002..1719042 + 346 42527171 - TDE1664 - hypothetical protein 1653 36.04 0 1718998..1719219 - 73 42527172 - TDE1665 - hypothetical protein 1654 30.46 -1 1719386..1720081 + 231 42527173 - TDE1666 - hypothetical protein 1655 38.62 0 1720083..1721141 - 352 42527174 - TDE1667 - translation initiation factor IF-2B subunit alpha 1656 34.13 0 1721358..1722734 + 458 42527175 - TDE1668 - amino acid permease family protein 1657 34.67 0 1722745..1723938 + 397 42527176 - TDE1669 - hemolysin 1658 29.14 -1 1724003..1724551 - 182 42527177 - TDE1670 - MarR family transcriptional regulator 1659 35.62 0 1725052..1726407 + 451 42527178 tig TDE1671 - trigger factor 1660 42.76 0 1726432..1727025 + 197 42527179 clpP-1 TDE1672 - ATP-dependent Clp protease, proteolytic subunit ClpP 1661 41.03 0 1727018..1728265 + 415 42527180 clpX TDE1673 - ATP-dependent protease ATP-binding subunit 1662 27.50 -1 1728322..1728681 - 119 42527181 - TDE1674 - hypothetical protein 1663 38.67 0 1728733..1729332 - 199 42527182 rplI TDE1675 - 50S ribosomal protein L9 1664 41.85 0 1729463..1729732 - 89 42527183 rpsR TDE1676 - 30S ribosomal protein S18 1665 45.56 +1 1729773..1730279 - 168 42527184 ssb TDE1677 - single-strand binding protein 1666 39.01 0 1730292..1730573 - 93 42527185 rpsF TDE1678 - 30S ribosomal protein S6 1667 47.28 +1 1730717..1731139 - 140 42527186 atpK TDE1679 - V-type ATP synthase subunit K 1668 41.46 0 1733013..1733627 - 204 42527187 atpD TDE1681 - V-type ATP synthase subunit D 1669 44.91 +1 1733638..1734933 - 431 42527188 atpB TDE1682 - V-type ATP synthase subunit B 1670 44.63 +1 1734935..1736704 - 589 42527189 atpA TDE1683 - V-type ATP synthase subunit A 1671 39.44 0 1736845..1737417 - 190 42527190 apt TDE1684 - adenine phosphoribosyltransferase 1672 33.47 0 1737442..1740405 - 987 42527191 - TDE1685 - GGDEF domain-containing protein 1673 37.78 0 1740504..1741853 - 449 42527192 aroA TDE1686 - 3-phosphoshikimate 1-carboxyvinyltransferase 1674 39.51 0 1741850..1744132 - 760 42527193 - TDE1687 - hypothetical protein 1675 33.57 0 1744181..1745881 - 566 42527194 - TDE1688 - hypothetical protein 1676 39.00 0 1745897..1746655 - 252 42527195 - TDE1689 - ABC transporter, ATP-binding protein 1677 35.76 0 1746673..1747290 - 205 42527196 - TDE1690 - hypothetical protein 1678 34.49 0 1747497..1748363 - 288 42527197 - TDE1691 - hypothetical protein 1679 30.30 -1 1748433..1748531 + 32 42527198 - TDE1692 - hypothetical protein 1680 38.91 0 1748528..1749316 - 262 42527199 - TDE1693 - hypothetical protein 1681 36.81 0 1749313..1749456 - 47 42527200 - TDE1694 - hypothetical protein 1682 42.75 0 1749588..1754090 - 1500 42527201 - TDE1695 - CoA-substrate-specific enzyme activase domain-containing protein 1683 41.63 0 1754110..1755591 - 493 42527202 - TDE1696 - hypothetical protein 1684 38.58 0 1755606..1756349 - 247 42527203 gpm TDE1697 - phosphoglycerate mutase 1685 32.86 0 1756426..1757274 - 282 42527204 - TDE1698 - serine/threonine protein phosphatase family protein 1686 30.07 -1 1757276..1758010 - 244 42527205 - TDE1699 - hypothetical protein 1687 25.93 -1 1758180..1758287 + 35 42527206 - TDE1700 - hypothetical protein 1688 41.22 0 1758280..1759407 + 375 42527207 - TDE1701 - hypothetical protein 1689 27.42 -1 1759500..1760057 + 185 42527208 - TDE1702 - hypothetical protein 1690 27.60 -1 1760123..1760698 + 191 42527209 - TDE1703 - hypothetical protein 1691 29.05 -1 1760728..1761264 + 178 42527210 - TDE1704 - hypothetical protein 1692 37.06 0 1761277..1762215 + 312 42527211 - TDE1705 - hypothetical protein 1693 40.41 0 1762265..1762843 - 192 42527212 cinA TDE1706 - competence/damage-inducible protein CinA 1694 38.61 0 1762865..1763281 - 138 42527213 - TDE1707 - hypothetical protein 1695 31.80 0 1763278..1764912 - 544 42527214 cutE-1 TDE1708 - apolipoprotein N-acyltransferase 1696 39.88 0 1764909..1765229 - 106 42527215 - TDE1709 - HU family DNA-binding protein 1697 44.07 +1 1765306..1765575 - 89 42527216 rpsT TDE1710 - 30S ribosomal protein S20 1698 34.70 0 1765642..1766808 - 388 42527217 - TDE1711 - RelA/SpoT domain-containing protein 1699 40.95 0 1766956..1768005 - 349 42527218 flaA TDE1712 - flagellar filament outer layer protein 1700 31.37 -1 1768100..1768558 - 152 42527219 - TDE1713 - hypothetical protein 1701 36.19 0 1768573..1769586 - 337 42527220 - TDE1714 - N-acetylmuramoyl-L-alanine amidase 1702 41.35 0 1769593..1770852 - 419 42527221 pgk TDE1715 - phosphoglycerate kinase 1703 39.15 0 1770941..1771318 - 125 42527222 - TDE1716 - glyoxalase family protein 1704 38.71 0 1771571..1772221 + 216 42527223 - TDE1717 - hypothetical protein 1705 43.51 +1 1772300..1773871 + 523 42527224 guaA TDE1718 - bifunctional GMP synthase/glutamine amidotransferase protein 1706 42.92 0 1774169..1774606 + 145 42527225 - TDE1719 - MarR family transcriptional regulator 1707 47.68 +1 1774603..1775292 + 229 42527226 - TDE1720 - radical SAM domain-containing protein 1708 45.87 +1 1775280..1776188 + 302 42527227 - TDE1721 - radical SAM domain-containing protein 1709 33.62 0 1776225..1776578 + 117 42527228 - TDE1722 - hypothetical protein 1710 46.67 +1 1776775..1777839 + 354 42527229 - TDE1723 - hypothetical protein 1711 29.76 -1 1777901..1778431 + 176 42527230 - TDE1724 - hypothetical protein 1712 41.69 0 1778483..1779367 - 294 42527231 - TDE1725 - hypothetical protein 1713 38.06 0 1779686..1780828 + 380 42527232 - TDE1726 - polyA polymerase family protein 1714 40.05 0 1780864..1781280 - 138 42527233 - TDE1727 - hypothetical protein 1715 35.26 0 1781306..1783324 - 672 42527234 - TDE1728 - hypothetical protein 1716 35.26 0 1783379..1783846 - 155 42527235 - TDE1729 - glutathione peroxidase (selenocysteine-containing) 1717 42.93 0 1783833..1785635 - 600 42527236 - TDE1730 - glycosy hydrolase family protein 1718 42.02 0 1785622..1787025 - 467 42527237 - TDE1731 - hypothetical protein 1719 33.81 0 1787170..1788006 + 278 42527238 - TDE1732 - hypothetical protein 1720 43.24 +1 1787993..1788739 + 248 42527239 map TDE1733 - methionine aminopeptidase, type I 1721 42.67 0 1788753..1789523 + 256 42527240 xth TDE1734 - exodeoxyribonuclease III 1722 25.64 -2 1789942..1790058 + 38 42527241 - TDE1735 - hypothetical protein 1723 48.54 +1 1790048..1790218 + 56 42527242 - TDE1736 - ferredoxin, 2(4Fe-4S) 1724 36.93 0 1790273..1790689 + 138 42527243 - TDE1737 - hypothetical protein 1725 40.24 0 1790676..1791587 + 303 42527244 - TDE1738 - M23/M37 peptidase domain-containing protein 1726 34.37 0 1791653..1792717 + 354 42527245 - TDE1739 - femAB family protein 1727 45.51 +1 1792720..1792875 - 51 42527246 - TDE1740 - hypothetical protein 1728 42.19 0 1792932..1795472 + 846 42527247 - TDE1741 - penicillin-binding protein 1729 40.60 0 1795743..1797668 - 641 42527248 - TDE1742 - AMP-binding enzyme family protein 1730 39.18 0 1798030..1798593 - 187 42527249 - TDE1743 - chromate transport protein 1731 38.44 0 1798593..1799180 - 195 42527250 - TDE1744 - chromate transport protein 1732 37.22 0 1799205..1799564 - 119 42527251 - TDE1745 - hypothetical protein 1733 39.69 0 1799564..1800805 - 413 42527252 - TDE1746 - hypothetical protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0