version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1604 27.11 -1 1663397..1663798 - 133 42527123 - TDE1615 - hypothetical protein 1605 39.11 0 1663845..1664813 - 322 42527124 hprA TDE1616 - glycerate dehydrogenase 1606 30.56 -1 1664806..1664949 - 47 42527125 - TDE1617 - hypothetical protein 1607 27.48 -1 1665440..1666276 + 278 42527126 - TDE1618 - hypothetical protein 1608 28.46 -1 1666269..1666658 + 129 42527127 - TDE1619 - hypothetical protein 1609 33.98 0 1667049..1669052 - 667 42527128 - TDE1620 - hypothetical protein 1610 34.00 0 1669043..1670833 - 596 42527129 - TDE1621 - hypothetical protein 1611 55.56 +2 1670910..1671071 - 53 42527130 - TDE1622 - hypothetical protein 1612 27.73 -1 1671108..1672070 - 320 42527131 - TDE1623 - hypothetical protein 1613 44.51 +1 1672161..1673609 - 482 42527132 gcvP2 TDE1624 - glycine dehydrogenase subunit 2 1614 42.45 0 1673609..1674913 - 434 42527133 gcvP1 TDE1625 - glycine dehydrogenase subunit 1 1615 39.57 0 1675001..1675369 - 122 42527134 gcvH TDE1626 - glycine cleavage system H protein 1616 42.46 0 1675428..1676501 - 357 42527135 gcvT TDE1627 - glycine cleavage system T protein 1617 34.66 0 1676569..1676946 - 125 42527136 - TDE1628 - hypothetical protein 1618 41.19 0 1677243..1678604 - 453 42527137 lpdA TDE1629 - dihydrolipoamide dehydrogenase 1619 30.36 -1 1678732..1679772 - 346 42527138 - TDE1630 - hypothetical protein 1620 42.75 0 1680150..1681646 - 498 42527139 citF TDE1631 - citrate lyase, alpha subunit 1621 44.83 +1 1681659..1682528 - 289 42527140 citE TDE1632 - citrate lyase, beta subunit 1622 39.77 0 1682518..1682781 - 87 42527141 citD TDE1633 - citrate lyase subunit gamma 1623 35.84 0 1682875..1683153 - 92 42527142 - TDE1634 - hypothetical protein 1624 31.94 0 1683122..1683409 - 95 42527143 - TDE1635 - hypothetical protein 1625 38.54 0 1683607..1686045 - 812 42527144 - TDE1636 - surface antigen, putative 1626 42.16 0 1686212..1689022 + 936 42527145 polA TDE1637 - DNA polymerase I 1627 34.97 0 1689022..1689693 + 223 42527146 - TDE1638 - dephospho-CoA kinase, putative 1628 39.71 0 1689703..1690533 + 276 42527147 - TDE1639 - sporulation repeat-containing protein 1629 37.58 0 1690536..1692017 + 493 42527148 - TDE1640 - 3-dehydroquinate dehydratase, type 1, putative/shikimate 5-dehydrogenase, putative 1630 38.47 0 1692017..1692736 + 239 42527149 rpiA TDE1641 - ribose 5-phosphate isomerase A 1631 33.75 0 1692861..1693577 - 238 42527150 - TDE1642 - hypothetical protein 1632 39.07 0 1693649..1694641 - 330 42527151 - TDE1643 - PASTA domain-containing protein 1633 40.87 0 1694668..1695636 - 322 42527152 fmt TDE1644 - methionyl-tRNA formyltransferase 1634 35.29 0 1695633..1696142 - 169 42527153 def TDE1645 - polypeptide deformylase 1635 25.76 -1 1696139..1696270 - 43 42527154 - TDE1646 - hypothetical protein 1636 33.62 0 1696245..1696592 - 115 42527155 - TDE1647 - DNA-binding protein 1637 29.80 -1 1696576..1696830 - 84 42527156 - TDE1648 - hypothetical protein 1638 33.95 0 1696880..1697527 - 215 42527157 - TDE1649 - hypothetical protein 1639 38.60 0 1697467..1698207 - 246 42527158 - TDE1650 - ABC transporter, ATP-binding protein 1640 41.01 0 1698211..1698822 - 203 42527159 - TDE1651 - BioY family protein 1641 37.23 0 1698947..1700614 - 555 42527160 - TDE1652 - ABC transporter, ATP-binding/permease protein 1642 41.22 0 1702359..1704971 + 870 42527161 - TDE1654 - ATP-dependent helicase HrpA, putative 1643 35.03 0 1705098..1705628 + 176 42527162 - TDE1655 - hypothetical protein 1644 38.21 0 1705649..1707310 - 553 42527163 - TDE1656 - putative lipoprotein 1645 37.96 0 1707320..1707730 - 136 42527164 nusB TDE1657 - transcription antitermination protein NusB 1646 33.61 0 1707745..1708821 - 358 42527165 - TDE1658 - basic membrane protein, putative 1647 42.32 0 1708921..1710723 - 600 42527166 alaS TDE1659 - alanyl-tRNA synthetase 1648 38.51 0 1710800..1715356 - 1518 42527167 - TDE1660 - leucine rich repeat domain-containing protein 1649 32.87 0 1715542..1715970 + 142 42527168 - TDE1661 - hypothetical protein 1650 42.38 0 1716038..1717375 + 445 42527169 dnaB TDE1662 - replicative DNA helicase 1651 34.92 0 1717459..1717962 + 167 42527170 - TDE1663 - OmpA family protein 1652 40.25 0 1718002..1719042 + 346 42527171 - TDE1664 - hypothetical protein 1653 36.04 0 1718998..1719219 - 73 42527172 - TDE1665 - hypothetical protein 1654 30.46 -1 1719386..1720081 + 231 42527173 - TDE1666 - hypothetical protein 1655 38.62 0 1720083..1721141 - 352 42527174 - TDE1667 - translation initiation factor IF-2B subunit alpha 1656 34.13 0 1721358..1722734 + 458 42527175 - TDE1668 - amino acid permease family protein 1657 34.67 0 1722745..1723938 + 397 42527176 - TDE1669 - hemolysin 1658 29.14 -1 1724003..1724551 - 182 42527177 - TDE1670 - MarR family transcriptional regulator 1659 35.62 0 1725052..1726407 + 451 42527178 tig TDE1671 - trigger factor 1660 42.76 0 1726432..1727025 + 197 42527179 clpP-1 TDE1672 - ATP-dependent Clp protease, proteolytic subunit ClpP 1661 41.03 0 1727018..1728265 + 415 42527180 clpX TDE1673 - ATP-dependent protease ATP-binding subunit 1662 27.50 -1 1728322..1728681 - 119 42527181 - TDE1674 - hypothetical protein 1663 38.67 0 1728733..1729332 - 199 42527182 rplI TDE1675 - 50S ribosomal protein L9 1664 41.85 0 1729463..1729732 - 89 42527183 rpsR TDE1676 - 30S ribosomal protein S18 1665 45.56 +1 1729773..1730279 - 168 42527184 ssb TDE1677 - single-strand binding protein 1666 39.01 0 1730292..1730573 - 93 42527185 rpsF TDE1678 - 30S ribosomal protein S6 1667 47.28 +1 1730717..1731139 - 140 42527186 atpK TDE1679 - V-type ATP synthase subunit K 1668 41.46 0 1733013..1733627 - 204 42527187 atpD TDE1681 - V-type ATP synthase subunit D 1669 44.91 +1 1733638..1734933 - 431 42527188 atpB TDE1682 - V-type ATP synthase subunit B 1670 44.63 +1 1734935..1736704 - 589 42527189 atpA TDE1683 - V-type ATP synthase subunit A 1671 39.44 0 1736845..1737417 - 190 42527190 apt TDE1684 - adenine phosphoribosyltransferase 1672 33.47 0 1737442..1740405 - 987 42527191 - TDE1685 - GGDEF domain-containing protein 1673 37.78 0 1740504..1741853 - 449 42527192 aroA TDE1686 - 3-phosphoshikimate 1-carboxyvinyltransferase 1674 39.51 0 1741850..1744132 - 760 42527193 - TDE1687 - hypothetical protein 1675 33.57 0 1744181..1745881 - 566 42527194 - TDE1688 - hypothetical protein 1676 39.00 0 1745897..1746655 - 252 42527195 - TDE1689 - ABC transporter, ATP-binding protein 1677 35.76 0 1746673..1747290 - 205 42527196 - TDE1690 - hypothetical protein 1678 34.49 0 1747497..1748363 - 288 42527197 - TDE1691 - hypothetical protein 1679 30.30 -1 1748433..1748531 + 32 42527198 - TDE1692 - hypothetical protein 1680 38.91 0 1748528..1749316 - 262 42527199 - TDE1693 - hypothetical protein 1681 36.81 0 1749313..1749456 - 47 42527200 - TDE1694 - hypothetical protein 1682 42.75 0 1749588..1754090 - 1500 42527201 - TDE1695 - CoA-substrate-specific enzyme activase domain-containing protein 1683 41.63 0 1754110..1755591 - 493 42527202 - TDE1696 - hypothetical protein 1684 38.58 0 1755606..1756349 - 247 42527203 gpm TDE1697 - phosphoglycerate mutase 1685 32.86 0 1756426..1757274 - 282 42527204 - TDE1698 - serine/threonine protein phosphatase family protein 1686 30.07 -1 1757276..1758010 - 244 42527205 - TDE1699 - hypothetical protein 1687 25.93 -1 1758180..1758287 + 35 42527206 - TDE1700 - hypothetical protein 1688 41.22 0 1758280..1759407 + 375 42527207 - TDE1701 - hypothetical protein 1689 27.42 -1 1759500..1760057 + 185 42527208 - TDE1702 - hypothetical protein 1690 27.60 -1 1760123..1760698 + 191 42527209 - TDE1703 - hypothetical protein 1691 29.05 -1 1760728..1761264 + 178 42527210 - TDE1704 - hypothetical protein 1692 37.06 0 1761277..1762215 + 312 42527211 - TDE1705 - hypothetical protein 1693 40.41 0 1762265..1762843 - 192 42527212 cinA TDE1706 - competence/damage-inducible protein CinA 1694 38.61 0 1762865..1763281 - 138 42527213 - TDE1707 - hypothetical protein 1695 31.80 0 1763278..1764912 - 544 42527214 cutE-1 TDE1708 - apolipoprotein N-acyltransferase 1696 39.88 0 1764909..1765229 - 106 42527215 - TDE1709 - HU family DNA-binding protein 1697 44.07 +1 1765306..1765575 - 89 42527216 rpsT TDE1710 - 30S ribosomal protein S20 1698 34.70 0 1765642..1766808 - 388 42527217 - TDE1711 - RelA/SpoT domain-containing protein 1699 40.95 0 1766956..1768005 - 349 42527218 flaA TDE1712 - flagellar filament outer layer protein 1700 31.37 -1 1768100..1768558 - 152 42527219 - TDE1713 - hypothetical protein 1701 36.19 0 1768573..1769586 - 337 42527220 - TDE1714 - N-acetylmuramoyl-L-alanine amidase 1702 41.35 0 1769593..1770852 - 419 42527221 pgk TDE1715 - phosphoglycerate kinase 1703 39.15 0 1770941..1771318 - 125 42527222 - TDE1716 - glyoxalase family protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.