version 1.0
Treponema denticola ATCC 35405, complete genome - 1..2843201 2767 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1492 40.32 0 1551807..1553453 + 548 42527011 rho TDE1503 - transcription termination factor Rho 1493 35.78 0 1553490..1553693 + 67 42527012 rpmE TDE1504 - 50S ribosomal protein L31 1494 38.29 0 1553754..1554197 + 147 42527013 - TDE1505 - hypothetical protein 1495 45.68 +1 1554242..1555132 - 296 42527014 sdhA TDE1506 - L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1496 44.19 +1 1555152..1555814 - 220 42527015 sdhB TDE1507 - L-serine dehydratase, iron-sulfur-dependent, beta subunit 1497 37.12 0 1556116..1556511 + 131 42527016 - TDE1508 - hypothetical protein 1498 36.34 0 1556529..1557194 + 221 42527017 - TDE1509 - lipoprotein releasing system, ATP-binding protein, putative 1499 36.80 0 1557320..1558588 + 422 42527018 - TDE1510 - hypothetical protein 1500 43.86 +1 1558628..1559254 + 208 42527019 - TDE1511 - pathogen-specific surface antigen, putative 1501 32.78 0 1559343..1560611 + 422 42527020 - TDE1512 - hypothetical protein 1502 40.74 0 1560624..1560758 + 44 42527021 - TDE1513 - hypothetical protein 1503 39.12 0 1560792..1562069 + 425 42527022 - TDE1514 - permease domain protein 1504 38.77 0 1562118..1563239 + 373 42527023 - TDE1515 - permease domain protein 1505 41.41 0 1563267..1563959 + 230 42527024 - TDE1516 - ABC transporter, ATP-binding protein, putative 1506 33.33 0 1563956..1564405 + 149 42527025 - TDE1517 - hypothetical protein 1507 33.83 0 1564424..1565635 + 403 42527026 - TDE1518 - permease, putative 1508 35.27 0 1565741..1566412 + 223 42527027 - TDE1519 - hypothetical protein 1509 42.55 0 1566491..1567336 + 281 42527028 - TDE1520 - fumarate hydratase 1510 42.91 0 1567351..1567914 + 187 42527029 - TDE1521 - fumarate hydratase 1511 34.69 0 1567920..1568948 + 342 42527030 citC TDE1522 - citrate lyase ligase 1512 37.50 0 1568966..1570381 + 471 42527031 - TDE1523 - citXG protein, putative 1513 30.11 -1 1570432..1570524 + 30 42527032 - TDE1524 - hypothetical protein 1514 29.96 -1 1570478..1570714 + 78 42527033 - TDE1525 - hypothetical protein 1515 41.98 0 1570705..1570947 + 80 42527034 - TDE1526 - hypothetical protein 1516 27.08 -1 1570944..1571855 + 303 42527035 - TDE1527 - hypothetical protein 1517 25.51 -2 1571865..1573001 + 378 42527036 - TDE1528 - hypothetical protein 1518 22.50 -2 1573004..1575127 + 707 42527037 - TDE1529 - hypothetical protein 1519 39.64 0 1575186..1575962 - 258 42527038 - TDE1530 - hypothetical protein 1520 31.09 -1 1576091..1576669 + 192 42527039 - TDE1531 - hypothetical protein 1521 32.63 0 1576659..1577228 + 189 42527040 - TDE1532 - hypothetical protein 1522 39.21 0 1577254..1578717 + 487 42527041 - TDE1533 - hypothetical protein 1523 38.31 0 1578757..1579218 - 153 42527042 - TDE1534 - hypothetical protein 1524 41.42 0 1579227..1580030 - 267 42527043 - TDE1535 - hypothetical protein 1525 41.33 0 1580034..1580558 - 174 42527044 - TDE1536 - TPR domain-containing protein 1526 39.98 0 1580562..1581614 - 350 42527045 - TDE1537 - polyprenyl synthetase family protein 1527 42.16 0 1581708..1583645 + 645 42527046 ligA TDE1538 - DNA ligase, NAD-dependent 1528 30.68 -1 1583648..1584250 + 200 42527047 - TDE1539 - hypothetical protein 1529 38.26 0 1584562..1585008 + 148 42527048 - TDE1540 - hypothetical protein 1530 40.19 0 1585038..1586000 + 320 42527049 - TDE1541 - metallo-beta-lactamase family protein 1531 37.50 0 1585997..1586188 + 63 42527050 - TDE1542 - hypothetical protein 1532 36.66 0 1586208..1587230 + 340 42527051 - TDE1543 - hypothetical protein 1533 37.11 0 1587294..1588406 + 370 42527052 - TDE1544 - mannosyltransferase, putative 1534 32.67 0 1588470..1589072 + 200 42527053 - TDE1545 - phosphoribosyl transferase domain-containing protein 1535 32.15 0 1589069..1591264 + 731 42527054 - TDE1546 - hypothetical protein 1536 35.85 0 1591264..1591860 + 198 42527055 rnhB TDE1547 - ribonuclease HII 1537 38.19 0 1591975..1592262 + 95 42527056 - TDE1548 - hypothetical protein 1538 43.88 +1 1592280..1592867 + 195 42527057 recR TDE1549 - recombination protein RecR 1539 38.27 0 1592887..1594569 + 560 42527058 - TDE1550 - diphosphate--fructose-6-phosphate 1-phosphotransferase 1540 34.94 0 1594628..1595623 - 331 42527059 - TDE1551 - lipoyltransferase and lipoate-protein ligase family protein 1541 32.47 0 1595899..1596480 + 193 42527060 - TDE1552 - hypothetical protein 1542 26.40 -1 1596496..1597158 + 220 42527061 - TDE1553 - hypothetical protein 1543 29.79 -1 1597145..1598161 + 338 42527062 - TDE1554 - hypothetical protein 1544 31.88 0 1598158..1598916 + 252 42527063 - TDE1555 - hypothetical protein 1545 32.92 0 1598927..1600129 + 400 42527064 - TDE1556 - hypothetical protein 1546 33.33 0 1600126..1600830 + 234 42527065 - TDE1557 - hypothetical protein 1547 35.99 0 1600897..1610859 + 3320 42527066 - TDE1558 - YD repeat-containing protein 1548 25.12 -2 1610863..1611471 + 202 42527067 - TDE1559 - hypothetical protein 1549 40.55 0 1611590..1614970 + 1126 42527068 - TDE1560 - YD repeat-containing protein 1550 23.15 -2 1614974..1615297 + 107 42527069 - TDE1561 - hypothetical protein 1551 26.73 -1 1615388..1615705 + 105 42527070 - TDE1562 - hypothetical protein 1552 31.17 -1 1615833..1616573 + 246 42527071 - TDE1563 - hypothetical protein 1553 36.59 0 1616642..1616764 + 40 42527072 - TDE1564 - hypothetical protein 1554 24.44 -2 1617033..1617482 + 149 42527073 - TDE1565 - hypothetical protein 1555 36.75 0 1617962..1619044 + 360 42527074 - TDE1566 - hypothetical protein 1556 31.33 -1 1619052..1619651 + 199 42527075 - TDE1567 - hypothetical protein 1557 28.43 -1 1619684..1619887 + 67 42527076 - TDE1568 - hypothetical protein 1558 34.23 0 1619925..1620035 + 36 42527077 - TDE1569 - hypothetical protein 1559 24.30 -2 1620202..1620666 + 154 42527078 - TDE1570 - hypothetical protein 1560 23.23 -2 1620808..1620906 + 32 42527079 - TDE1571 - hypothetical protein 1561 20.35 -2 1621003..1621572 + 189 42527080 - TDE1572 - hypothetical protein 1562 31.40 -1 1621631..1621888 - 85 42527081 - TDE1573 - DNA-damage-inducible protein J, putative 1563 24.56 -2 1621940..1622053 + 37 42527082 - TDE1574 - hypothetical protein 1564 39.06 0 1622043..1622915 + 290 42527083 lipA TDE1575 - lipoyl synthase 1565 39.53 0 1622918..1624273 + 451 42527084 miaB TDE1576 - tRNA-i(6)A37 modification enzyme MiaB 1566 33.57 0 1624649..1625506 + 285 42527085 - TDE1577 - putative lipoprotein 1567 35.00 0 1625510..1626169 + 219 42527086 - TDE1578 - phosphoesterase, putative 1568 35.45 0 1626164..1627579 - 471 42527087 - TDE1579 - fibronectin/fibrinogen-binding protein, internal deletion 1569 34.63 0 1627579..1629816 - 745 42527088 - TDE1580 - hypothetical protein 1570 32.37 0 1629818..1630336 - 172 42527089 - TDE1581 - hypothetical protein 1571 39.63 0 1630374..1631849 - 491 42527090 glgA TDE1582 - glycogen synthase 1572 32.50 0 1631948..1632067 + 39 42527091 - TDE1583 - hypothetical protein 1573 36.67 0 1632165..1632914 + 249 42527092 - TDE1584 - putative lipoprotein 1574 37.18 0 1633022..1633489 - 155 42527093 - TDE1585 - hypothetical protein 1575 39.34 0 1633528..1634010 - 160 42527094 - TDE1586 - hypothetical protein 1576 45.12 +1 1634173..1635945 + 590 42527095 aspS TDE1587 - aspartyl-tRNA synthetase 1577 44.32 +1 1635953..1637026 + 357 42527096 - TDE1588 - tryptophanyl-tRNA synthetase II 1578 38.86 0 1637144..1637650 + 168 42527097 cheW-2 TDE1589 - purine-binding chemotaxis protein 1579 40.74 0 1637656..1638681 + 341 42527098 - TDE1590 - aminotransferase 1580 40.82 0 1638722..1639576 + 284 42527099 - TDE1591 - inorganic polyphosphate/ATP-NAD kinase, putative 1581 41.68 0 1639631..1641283 + 550 42527100 - TDE1592 - ABC transporter, ATP-binding protein 1582 40.70 0 1641299..1643089 - 596 42527101 - TDE1593 - Fe-hydrogenase 1583 43.39 +1 1643083..1644912 - 609 42527102 - TDE1594 - putative glutamate synthase (NADPH) small subunit 1584 42.03 0 1645038..1646129 - 363 42527103 cbiD TDE1595 - cobalamin biosynthesis protein CbiD 1585 32.99 0 1646189..1646770 - 193 42527104 - TDE1596 - hypothetical protein 1586 30.65 -1 1646785..1647492 - 235 42527105 - TDE1597 - transporter, putative 1587 34.66 0 1647492..1649000 - 502 42527106 - TDE1598 - ABC transporter, ATP-binding protein 1588 35.07 0 1649010..1650734 - 574 42527107 - TDE1599 - ABC transporter, ATP-binding/permease protein 1589 35.16 0 1650735..1652486 - 583 42527108 - TDE1600 - ABC transporter, ATP-binding/permease protein 1590 35.34 0 1652479..1653126 - 215 42527109 - TDE1601 - TetR family transcriptional regulator 1591 27.93 -1 1653237..1653347 - 36 42527110 - TDE1602 - hypothetical protein 37.25 MEAN 5.76 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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