version 1.0
Thermoplasma volcanium GSS1, complete genome - 1..1584804 1499 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 535 45.29 +1 524958..525551 + 197 13541366 - TVN0535 - 50S ribosomal protein L15e 536 42.44 0 525832..526731 + 299 13541367 - TVN0536 - polysaccharide deacetylase 537 42.05 0 526852..527241 + 129 13541368 - TVN0537 - translation initiation factor IF-5A 538 40.68 0 527199..528110 + 303 13541369 - TVN0538 - agmatinase 539 44.63 +1 528148..528678 - 176 13541370 rpl10e TVN0539 - 50S ribosomal protein L10e 540 39.51 0 528853..529095 - 80 13541371 - TVN0540 - hypothetical protein 541 41.43 0 529230..531155 + 641 13541372 gyrB TVN0541 - DNA gyrase subunit B 542 42.71 0 531167..533545 + 792 13541373 - TVN0542 - DNA gyrase subunit A 543 40.03 0 533595..534221 + 208 13541374 - TVN0543 - nicotinamidase-like amidase 544 43.08 0 534246..535415 + 389 13541375 - TVN0544 - ABC-type molybdate transport system, solute-binding component 545 41.51 0 535417..536211 + 264 13541376 - TVN0545 - ABC-type molybdate transport system, permease component 546 40.53 0 536198..537100 + 300 13541377 - TVN0546 - ABC-type molybdate transporter, ATPase component 547 39.97 0 537452..538204 - 250 13541378 - TVN0547 - cell wall biosynthesis glycosyltransferase 548 39.15 0 538221..538409 - 62 13541379 - TVN0548 - hypothetical protein 549 40.50 0 538469..539431 - 320 13541380 - TVN0549 - hypothetical protein 550 40.18 0 539478..539813 - 111 13541381 - TVN0550 - nucleic acid binding protein 551 37.78 0 539914..540138 + 74 13541382 - TVN0551 - phosphoribosylformylglycinamidine synthase 552 38.25 0 540271..541998 + 575 13541383 - TVN0552 - hypothetical protein 553 38.26 0 542231..542920 + 229 13541384 - TVN0553 - hypothetical protein 554 45.28 +1 542914..543273 - 119 13541385 - TVN0554 - hypothetical protein 555 40.36 0 543386..543769 + 127 13541386 - TVN0555 - 30S ribosomal protein S8e 556 41.57 0 543776..544030 + 84 13541387 - TVN0556 - Signal recognition particle 19 kDa protein 557 39.63 0 544022..545005 - 327 13541388 - TVN0557 - DNA primase large subunit 558 41.64 0 545002..546084 - 360 13541389 - TVN0558 - putative proline dipeptidase 559 40.60 0 546468..547169 + 233 13541390 radB TVN0559 - DNA repair and recombination protein RadB 560 40.87 0 547159..548166 + 335 13541391 - TVN0560 - flap endonuclease-1 561 40.46 0 548252..549499 + 415 13541392 - TVN0561 - major facilitator superfamily permease 562 45.74 +1 549581..550096 + 171 13541393 rps13p TVN0562 - 30S ribosomal protein S13P 563 44.28 0 550107..550709 + 200 13541394 rps4p TVN0563 - 30S ribosomal protein S4 564 45.36 +1 550687..551085 + 132 13541395 rps11p TVN0564 - 30S ribosomal protein S11P 565 43.26 0 551086..551901 + 271 13541396 - TVN0565 - DNA-directed RNA polymerase subunit D 566 41.31 0 552135..553325 + 396 13541397 - TVN0566 - molybdopterin biosynthesis protein 567 40.88 0 553331..555211 + 626 13541398 - TVN0567 - molybdopterin biosynthesis protein 568 41.16 0 555376..556167 - 263 13541399 - TVN0568 - hypothetical protein 569 37.36 -1 556254..556526 + 90 13541400 - TVN0569 - molybdopterin converting factor, small subunit 570 41.48 0 556601..557275 + 224 13541401 - TVN0570 - transcription initiation factor IIB 571 44.62 +1 557379..558521 - 380 13541402 - TVN0571 - aminotransferase 572 42.98 0 558589..559821 - 410 13541403 - TVN0572 - hypothetical protein 573 42.11 0 559784..561151 - 455 13541404 - TVN0573 - DNA helicase 574 40.58 0 561228..562373 + 381 13541405 - TVN0574 - SAM-dependent methyltransferase 575 40.65 0 562457..563044 + 195 13541406 ribA TVN0575 - GTP cyclohydrolase II 576 42.74 0 563052..563636 - 194 13541407 - TVN0576 - indolepyruvate oxidoreductase subunit B 577 44.79 +1 563624..565438 - 604 13541408 - TVN0577 - indolepyruvate:ferredoxin oxidoreductase, alpha and beta subunits 578 40.77 0 565645..566451 + 268 13541409 - TVN0578 - FKBP-type peptidyl-prolyl cis-trans isomerase 579 42.50 0 566438..567190 + 250 13541410 - TVN0579 - rRNA methylase 580 36.42 -1 567165..567488 + 107 13541411 - TVN0580 - hypothetical protein 581 41.07 0 568043..569632 + 529 13541412 - TVN0581 - Fe-S oxidoreductase 582 43.29 0 569675..570508 + 277 13541413 - TVN0582 - hypothetical protein 583 39.91 0 570518..571216 + 232 13541414 - TVN0583 - hypothetical protein 584 38.39 0 571194..572399 - 401 13541415 - TVN0584 - Serine/threonine protein kinase 585 43.93 0 572464..573237 - 257 13541416 - TVN0585 - competence damage-inducible protein A 586 41.37 0 573246..573929 - 227 13541417 pyrH TVN0586 - uridylate kinase 587 40.58 0 575161..575781 + 206 13541418 - TVN0587 - transposase 588 42.39 0 576190..577437 + 415 13541419 - TVN0588 - peptide chain release factor 1 589 42.58 0 577443..578372 + 309 13541420 - TVN0589 - cysteine synthase 590 37.75 0 578390..579613 + 407 13541421 hemA TVN0590 - glutamyl-tRNA reductase 591 41.07 0 579516..580265 - 249 13541422 - TVN0591 - ICC-like phosphoesterase 592 44.07 0 580405..581550 - 381 13541423 - TVN0592 - hypothetical protein 593 39.53 0 581547..582449 - 300 13541424 - TVN0593 - Fe-S oxidoreductase 594 44.72 +1 582526..583737 - 403 13541425 - TVN0594 - major facilitator superfamily permease 595 44.33 +1 584082..585218 - 378 13541426 - TVN0595 - Fe-S oxidoreductase 596 42.90 0 585220..586599 - 459 13541427 - TVN0596 - FAD/FMN-containing dehydrogenase 597 36.65 -1 586833..590237 + 1134 13541428 - TVN0597 - hypothetical protein 598 37.97 0 590215..590688 + 157 13541429 - TVN0598 - phosphatase 599 40.11 0 590669..591982 - 437 13541430 - TVN0599 - DNA-binding protein 600 39.12 0 591988..592764 - 258 13541431 - TVN0600 - undecaprenyl pyrophosphate synthase 601 35.51 -1 592854..593312 - 152 13541432 - TVN0601 - hypothetical protein 602 37.63 0 593418..593813 + 131 13541433 - TVN0602 - hypothetical protein 603 37.91 0 593814..594797 + 327 13541434 - TVN0603 - transcription regulator (HTH) 604 40.74 0 594890..595213 + 107 13541435 - TVN0604 - transcription regulator 605 38.10 0 595236..596849 + 537 13541436 pheT TVN0605 - phenylalanyl-tRNA synthetase subunit beta 606 38.43 0 596843..597352 - 169 13541437 - TVN0606 - acetyltransferase 607 45.03 +1 597888..598631 + 247 13541438 - TVN0607 - flagellin 608 38.49 0 598670..599134 + 154 13541439 - TVN0608 - flagellar protein C 609 42.35 0 599131..599784 + 217 13541440 - TVN0609 - flagellar protein E 610 33.82 -2 599774..600187 + 137 13541441 - TVN0610 - flagellar protein F 611 42.79 0 600188..600631 + 147 13541442 - TVN0611 - flagellar protein G 612 43.90 0 600636..601307 + 223 13541443 - TVN0612 - flagellar accessory protein FlaH 613 42.04 0 601313..602920 + 535 13541444 - TVN0613 - ATPase 614 39.66 0 602910..604568 + 552 13541445 - TVN0614 - flagellar assembly protein J 615 38.85 0 605411..609019 + 1202 13541446 - TVN0615 - TPR repeat-containing protein 616 41.62 0 609064..609642 + 192 13541447 - TVN0616 - Zn-dependent protease 617 37.91 0 609673..610743 - 356 13541448 - TVN0617 - glycosyltransferase 618 38.41 0 610740..611015 - 91 13541449 ef1B TVN0618 - elongation factor 1-beta 619 45.83 +1 611012..611179 - 55 13541450 - TVN0619 - RNA-binding protein involved in translation 620 41.96 0 611334..612677 + 447 13541451 - TVN0620 - phosphomannomutase 621 39.33 0 612669..613268 - 199 13541452 - TVN0621 - phosphatidylglycerophosphate synthase 622 38.53 0 613288..613749 - 153 13541453 - TVN0622 - nucleotide kinase (related to CMP and AMP kinase) 623 40.81 0 613788..615125 - 445 13541454 - TVN0623 - purine-cytosine permease 624 36.79 -1 615221..615712 + 163 13541455 - TVN0624 - transcription regulator 625 43.20 0 615821..617128 + 435 13541456 - TVN0625 - phosphoribosylamine--glycine ligase 626 42.59 0 617441..617710 + 89 13541457 - TVN0626 - hypothetical protein 627 41.87 0 617864..618226 + 120 13541458 - TVN0627 - ArsR family transcriptional regulator 628 40.13 0 618303..620303 + 666 13541459 - TVN0628 - hypothetical protein 629 40.17 0 620800..621501 + 233 13541460 - TVN0629 - SAM-dependent methyltransfera 630 43.20 0 621603..623447 + 614 13541461 - TVN0630 - Mg-chelatase, I and D subunits 631 41.83 0 623523..624440 + 305 13541462 pyrB TVN0631 - aspartate carbamoyltransferase catalytic subunit 632 38.34 0 624442..624900 + 152 13541463 - TVN0632 - aspartate carbamoyltransferase regulatory subunit 633 37.63 0 625033..625731 - 232 13541464 hemD TVN0633 - uroporphyrinogen-III synthase 634 38.81 0 625731..626624 - 297 13541465 hemC TVN0634 - porphobilinogen deaminase 40.87 MEAN 3.44 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.